Gene annotation
Transcriptome id Sobic.006G101100.1
Synonym Sb06g018480
Functional annotation expressed protein
UniProt C5Y9P3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g37880.1 : expressed protein
MaizeGDB (Corn) Zm00025a011160
Brachypodium KQK18928
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
2 Sobic.006G101300 expressed protein -
3 Sobic.008G066200 expressed protein -
4 Sobic.001G259900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
5 Sobic.003G313100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.010G082600 EF hand family protein, putative, expressed -
7 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
8 Sobic.001G259400 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
9 Sobic.003G142300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.003G079200 - -
11 Sobic.008G066401 - -
12 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
13 Sobic.006G008000 O-methyltransferase, putative, expressed -
14 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
15 Sobic.004G169300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain-containing protein, putative, expressed -
16 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
18 Sobic.003G362700 cytochrome P450, putative, expressed -
19 Sobic.004G064500 class I glutamine amidotransferase, putative, expressed -
20 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic006G101100 Sobic006G101100 Sobic009G192600 Sobic009G192600 Sobic006G101100--Sobic009G192600 Sobic006G101300 Sobic006G101300 Sobic006G101100--Sobic006G101300 Sobic008G066200 Sobic008G066200 Sobic006G101100--Sobic008G066200 Sobic001G259900 Sobic001G259900 Sobic006G101100--Sobic001G259900 Sobic003G313100 Sobic003G313100 Sobic006G101100--Sobic003G313100 Sobic010G082600 Sobic010G082600 Sobic006G101100--Sobic010G082600 Sobic002G012500 Sobic002G012500 Sobic006G101100--Sobic002G012500 Sobic001G259400 Sobic001G259400 Sobic006G101100--Sobic001G259400 Sobic003G142300 Sobic003G142300 Sobic006G101100--Sobic003G142300 Sobic002G189100 Sobic002G189100 Sobic009G192600--Sobic002G189100 Sobic004G064500 Sobic004G064500 Sobic009G192600--Sobic004G064500 Sobic009G192600--Sobic003G142300 Sobic009G192600--Sobic006G101100 Sobic004G191400 Sobic004G191400 Sobic009G192600--Sobic004G191400 Sobic003G428700 Sobic003G428700 Sobic009G192600--Sobic003G428700 Sobic009G192600--Sobic001G259900 Sobic001G267600 Sobic001G267600 Sobic009G192600--Sobic001G267600 Sobic003G093000 Sobic003G093000 Sobic009G192600--Sobic003G093000 Sobic006G234900 Sobic006G234900 Sobic006G101300--Sobic006G234900 Sobic006G101300--Sobic006G101100 Sobic002G042000 Sobic002G042000 Sobic006G101300--Sobic002G042000 Sobic006G026500 Sobic006G026500 Sobic006G101300--Sobic006G026500 Sobic006G101300--Sobic008G066200 Sobic004G169300 Sobic004G169300 Sobic006G101300--Sobic004G169300 Sobic007G008000 Sobic007G008000 Sobic006G101300--Sobic007G008000 Sobic008G022000 Sobic008G022000 Sobic006G101300--Sobic008G022000 Sobic003G418500 Sobic003G418500 Sobic006G101300--Sobic003G418500 Sobic006G008000 Sobic006G008000 Sobic008G066200--Sobic006G008000 Sobic008G066200--Sobic002G012500 Sobic009G145700 Sobic009G145700 Sobic008G066200--Sobic009G145700 Sobic003G079200 Sobic003G079200 Sobic008G066200--Sobic003G079200 Sobic009G145600 Sobic009G145600 Sobic008G066200--Sobic009G145600 Sobic008G066401 Sobic008G066401 Sobic008G066200--Sobic008G066401 Sobic008G066200--Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic008G066200--Sobic002G012300 Sobic001G188800 Sobic001G188800 Sobic008G066200--Sobic001G188800 Sobic003G442100 Sobic003G442100 Sobic001G259900--Sobic003G442100 Sobic006G007900 Sobic006G007900 Sobic001G259900--Sobic006G007900 Sobic009G198600 Sobic009G198600 Sobic001G259900--Sobic009G198600 Sobic009G141500 Sobic009G141500 Sobic001G259900--Sobic009G141500 Sobic009G184000 Sobic009G184000 Sobic001G259900--Sobic009G184000 Sobic006G235100 Sobic006G235100 Sobic001G259900--Sobic006G235100 Sobic001G259900--Sobic004G191400 Sobic001G310600 Sobic001G310600 Sobic001G259900--Sobic001G310600 Sobic001G079300 Sobic001G079300 Sobic001G259900--Sobic001G079300 Sobic003G313100--Sobic003G079200 Sobic003G313100--Sobic008G066200 Sobic003G313100--Sobic009G145600 Sobic003G313100--Sobic008G066401 Sobic003G313100--Sobic006G008000 Sobic003G313100--Sobic006G101100 Sobic003G313100--Sobic002G012500 Sobic003G313100--Sobic009G145700 Sobic003G313100--Sobic008G022000 Sobic004G141100 Sobic004G141100 Sobic010G082600--Sobic004G141100 Sobic010G082600--Sobic006G008000 Sobic010G082600--Sobic006G235100 Sobic010G082600--Sobic009G184000 Sobic010G082600--Sobic009G145700 Sobic003G426600 Sobic003G426600 Sobic010G082600--Sobic003G426600 Sobic010G082600--Sobic002G189100 Sobic010G082600--Sobic002G012500 Sobic003G043600 Sobic003G043600 Sobic010G082600--Sobic003G043600 Sobic002G012500--Sobic006G008000 Sobic002G012500--Sobic001G259400 Sobic002G012500--Sobic008G066200 Sobic002G012500--Sobic002G012300 Sobic002G012500--Sobic008G066401 Sobic002G012500--Sobic003G079200 Sobic002G012500--Sobic008G022000 Sobic008G158600 Sobic008G158600 Sobic002G012500--Sobic008G158600 Sobic002G012500--Sobic009G145600 Sobic001G259400--Sobic002G012500 Sobic001G259400--Sobic006G007900 Sobic001G259400--Sobic008G066401 Sobic005G086600 Sobic005G086600 Sobic001G259400--Sobic005G086600 Sobic001G259400--Sobic004G064500 Sobic001G259400--Sobic003G079200 Sobic001G259400--Sobic008G066200 Sobic001G259400--Sobic006G008000 Sobic001G259400--Sobic008G158600 Sobic003G142300--Sobic002G189100 Sobic003G142300--Sobic009G192600 Sobic003G362700 Sobic003G362700 Sobic003G142300--Sobic003G362700 Sobic003G142300--Sobic001G259400 Sobic003G142300--Sobic006G101100 Sobic003G142300--Sobic004G064500 Sobic003G313800 Sobic003G313800 Sobic003G142300--Sobic003G313800 Sobic001G259600 Sobic001G259600 Sobic003G142300--Sobic001G259600 Sobic003G142300--Sobic008G066401
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.