Gene annotation
Transcriptome id Sobic.009G200566.1
Synonym -
Functional annotation -
UniProt A0A1Z5R3H6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.008G158800 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.008G066401 - -
6 Sobic.009G184100 - -
7 Sobic.004G245700 expressed protein -
8 Sobic.008G066200 expressed protein -
9 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
10 Sobic.003G043500 - -
11 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -
12 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.003G376100 4,5-DOPA dioxygenase extradiol, putative, expressed K15777: 4,5-DOPA dioxygenase extradiol
14 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
15 Sobic.004G169300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain-containing protein, putative, expressed -
16 Sobic.006G054800 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in stay green (QSTG1_6) "(PubMedID : 24655390)@Glycerophosphodiester phosphodiesterase ( At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
17 Sobic.006G008000 O-methyltransferase, putative, expressed -
18 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
19 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type


Gene co-expression network
sample Sobic009G200566 Sobic009G200566 Sobic009G145700 Sobic009G145700 Sobic009G200566--Sobic009G145700 Sobic009G145600 Sobic009G145600 Sobic009G200566--Sobic009G145600 Sobic001G112200 Sobic001G112200 Sobic009G200566--Sobic001G112200 Sobic008G158800 Sobic008G158800 Sobic009G200566--Sobic008G158800 Sobic008G066401 Sobic008G066401 Sobic009G200566--Sobic008G066401 Sobic009G184100 Sobic009G184100 Sobic009G200566--Sobic009G184100 Sobic004G245700 Sobic004G245700 Sobic009G200566--Sobic004G245700 Sobic008G066200 Sobic008G066200 Sobic009G200566--Sobic008G066200 Sobic002G055700 Sobic002G055700 Sobic009G200566--Sobic002G055700 Sobic009G145700--Sobic009G145600 Sobic009G145700--Sobic008G066401 Sobic009G145700--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic009G145700--Sobic006G008000 Sobic009G145700--Sobic001G112200 Sobic003G043600 Sobic003G043600 Sobic009G145700--Sobic003G043600 Sobic003G043500 Sobic003G043500 Sobic009G145700--Sobic003G043500 Sobic009G184000 Sobic009G184000 Sobic009G145700--Sobic009G184000 Sobic003G079200 Sobic003G079200 Sobic009G145700--Sobic003G079200 Sobic009G145600--Sobic009G145700 Sobic009G145600--Sobic008G066401 Sobic009G145600--Sobic008G066200 Sobic009G145600--Sobic003G079200 Sobic009G145600--Sobic006G008000 Sobic009G145600--Sobic003G043500 Sobic009G145600--Sobic004G245700 Sobic002G012500 Sobic002G012500 Sobic009G145600--Sobic002G012500 Sobic009G145600--Sobic009G200566 Sobic001G112200--Sobic009G184000 Sobic001G318700 Sobic001G318700 Sobic001G112200--Sobic001G318700 Sobic001G138600 Sobic001G138600 Sobic001G112200--Sobic001G138600 Sobic003G369100 Sobic003G369100 Sobic001G112200--Sobic003G369100 Sobic007G169700 Sobic007G169700 Sobic001G112200--Sobic007G169700 Sobic004G237800 Sobic004G237800 Sobic001G112200--Sobic004G237800 Sobic001G112200--Sobic009G145700 Sobic007G074000 Sobic007G074000 Sobic001G112200--Sobic007G074000 Sobic001G310600 Sobic001G310600 Sobic001G112200--Sobic001G310600 Sobic008G158800--Sobic009G200566 Sobic008G158800--Sobic008G066200 Sobic004G109900 Sobic004G109900 Sobic008G158800--Sobic004G109900 Sobic008G022000 Sobic008G022000 Sobic008G158800--Sobic008G022000 Sobic008G158800--Sobic006G008000 Sobic003G426600 Sobic003G426600 Sobic008G158800--Sobic003G426600 Sobic004G169300 Sobic004G169300 Sobic008G158800--Sobic004G169300 Sobic008G158800--Sobic009G145700 Sobic003G418500 Sobic003G418500 Sobic008G158800--Sobic003G418500 Sobic008G066401--Sobic009G145700 Sobic008G066401--Sobic009G145600 Sobic008G066401--Sobic008G066200 Sobic008G066401--Sobic002G012500 Sobic008G066401--Sobic007G169700 Sobic008G066401--Sobic009G184000 Sobic008G066401--Sobic006G008000 Sobic008G066401--Sobic003G043500 Sobic003G362700 Sobic003G362700 Sobic008G066401--Sobic003G362700 Sobic009G184100--Sobic009G145700 Sobic009G184100--Sobic008G066401 Sobic009G184100--Sobic001G318700 Sobic009G184100--Sobic001G112200 Sobic003G064200 Sobic003G064200 Sobic009G184100--Sobic003G064200 Sobic006G235000 Sobic006G235000 Sobic009G184100--Sobic006G235000 Sobic009G184100--Sobic009G145600 Sobic009G184100--Sobic009G184000 Sobic003G268600 Sobic003G268600 Sobic009G184100--Sobic003G268600 Sobic004G245700--Sobic009G145600 Sobic004G245700--Sobic009G145700 Sobic004G245700--Sobic008G066401 Sobic004G245700--Sobic003G043500 Sobic004G245700--Sobic009G184100 Sobic004G245700--Sobic009G200566 Sobic009G145500 Sobic009G145500 Sobic004G245700--Sobic009G145500 Sobic006G054800 Sobic006G054800 Sobic004G245700--Sobic006G054800 Sobic004G245700--Sobic001G318700 Sobic008G066200--Sobic006G008000 Sobic008G066200--Sobic002G012500 Sobic008G066200--Sobic009G145700 Sobic008G066200--Sobic003G079200 Sobic008G066200--Sobic009G145600 Sobic008G066200--Sobic008G066401 Sobic008G066200--Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic008G066200--Sobic002G012300 Sobic001G188800 Sobic001G188800 Sobic008G066200--Sobic001G188800 Sobic003G303100 Sobic003G303100 Sobic002G055700--Sobic003G303100 Sobic003G382600 Sobic003G382600 Sobic002G055700--Sobic003G382600 Sobic002G055700--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic002G055700--Sobic003G426400 Sobic002G353900 Sobic002G353900 Sobic002G055700--Sobic002G353900 Sobic004G148200 Sobic004G148200 Sobic002G055700--Sobic004G148200 Sobic004G189400 Sobic004G189400 Sobic002G055700--Sobic004G189400 Sobic002G338500 Sobic002G338500 Sobic002G055700--Sobic002G338500 Sobic001G367600 Sobic001G367600 Sobic002G055700--Sobic001G367600
Octagon: transcription factors


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