Gene annotation
Transcriptome id Sobic.008G139600.1
Synonym Sb08g019050
Functional annotation lectin-like receptor kinase, putative, expressed
UniProt C5YQC0
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF63
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G55550 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os12g38610.1 : lectin-like receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a056576 , Zm00025a016193 , Zm00025a004289 , Zm00025a025717
Brachypodium KQJ83743 , KQJ96879 , KQJ96881 , KQK12404 , KQK18056
Barley HORVU5Hr1G114100.1 , HORVU2Hr1G091360.3 , HORVU2Hr1G091360.2 , HORVU2Hr1G091360.1 , HORVU5Hr1G114030.1 , HORVU5Hr1G114030.2 , HORVU5Hr1G114030.3 , HORVU5Hr1G114030.4 , HORVU5Hr1G020530.1 , HORVU4Hr1G081590.8 , HORVU4Hr1G081590.7 , HORVU4Hr1G081590.6 , HORVU4Hr1G081590.4 , HORVU4Hr1G081590.3 , HORVU4Hr1G081590.2 , HORVU4Hr1G081590.1
Wheat TraesCS5A02G484600 , TraesCS4D02G325500 , TraesCS1A02G184500 , TraesCS5A02G500100
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.008G139600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G054800 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in stay green (QSTG1_6) "(PubMedID : 24655390)@Glycerophosphodiester phosphodiesterase ( At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
2 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
3 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
5 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
8 Sobic.003G043500 - -
9 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
11 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
12 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
13 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
14 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
15 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
16 Sobic.010G259300 transferase family protein, putative, expressed -
17 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
19 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
20 Sobic.005G196800 membrane protein, putative, expressed -


Gene co-expression network
sample Sobic008G139600 Sobic008G139600 Sobic006G054800 Sobic006G054800 Sobic008G139600--Sobic006G054800 Sobic004G321300 Sobic004G321300 Sobic008G139600--Sobic004G321300 Sobic001G112200 Sobic001G112200 Sobic008G139600--Sobic001G112200 Sobic004G237800 Sobic004G237800 Sobic008G139600--Sobic004G237800 Sobic009G145700 Sobic009G145700 Sobic008G139600--Sobic009G145700 Sobic002G055700 Sobic002G055700 Sobic008G139600--Sobic002G055700 Sobic009G184000 Sobic009G184000 Sobic008G139600--Sobic009G184000 Sobic003G043500 Sobic003G043500 Sobic008G139600--Sobic003G043500 Sobic009G145600 Sobic009G145600 Sobic008G139600--Sobic009G145600 Sobic006G054800--Sobic008G139600 Sobic006G054800--Sobic003G043500 Sobic006G054800--Sobic009G145700 Sobic007G169700 Sobic007G169700 Sobic006G054800--Sobic007G169700 Sobic004G141100 Sobic004G141100 Sobic006G054800--Sobic004G141100 Sobic006G054800--Sobic009G145600 Sobic006G054800--Sobic001G112200 Sobic008G066401 Sobic008G066401 Sobic006G054800--Sobic008G066401 Sobic006G054800--Sobic009G184000 Sobic004G321300--Sobic004G237800 Sobic009G159400 Sobic009G159400 Sobic004G321300--Sobic009G159400 Sobic008G136400 Sobic008G136400 Sobic004G321300--Sobic008G136400 Sobic004G321300--Sobic008G139600 Sobic001G038900 Sobic001G038900 Sobic004G321300--Sobic001G038900 Sobic004G321300--Sobic002G055700 Sobic001G140900 Sobic001G140900 Sobic004G321300--Sobic001G140900 Sobic005G091500 Sobic005G091500 Sobic004G321300--Sobic005G091500 Sobic003G345100 Sobic003G345100 Sobic004G321300--Sobic003G345100 Sobic001G112200--Sobic009G184000 Sobic001G318700 Sobic001G318700 Sobic001G112200--Sobic001G318700 Sobic001G138600 Sobic001G138600 Sobic001G112200--Sobic001G138600 Sobic003G369100 Sobic003G369100 Sobic001G112200--Sobic003G369100 Sobic001G112200--Sobic007G169700 Sobic001G112200--Sobic004G237800 Sobic001G112200--Sobic009G145700 Sobic007G074000 Sobic007G074000 Sobic001G112200--Sobic007G074000 Sobic001G310600 Sobic001G310600 Sobic001G112200--Sobic001G310600 Sobic004G237800--Sobic007G074000 Sobic004G237800--Sobic004G321300 Sobic002G336600 Sobic002G336600 Sobic004G237800--Sobic002G336600 Sobic004G189400 Sobic004G189400 Sobic004G237800--Sobic004G189400 Sobic004G237800--Sobic002G055700 Sobic002G140400 Sobic002G140400 Sobic004G237800--Sobic002G140400 Sobic004G237800--Sobic005G091500 Sobic004G237800--Sobic001G112200 Sobic005G063100 Sobic005G063100 Sobic004G237800--Sobic005G063100 Sobic009G145700--Sobic009G145600 Sobic009G145700--Sobic008G066401 Sobic008G066200 Sobic008G066200 Sobic009G145700--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic009G145700--Sobic006G008000 Sobic009G145700--Sobic001G112200 Sobic003G043600 Sobic003G043600 Sobic009G145700--Sobic003G043600 Sobic009G145700--Sobic003G043500 Sobic009G145700--Sobic009G184000 Sobic003G079200 Sobic003G079200 Sobic009G145700--Sobic003G079200 Sobic003G303100 Sobic003G303100 Sobic002G055700--Sobic003G303100 Sobic003G382600 Sobic003G382600 Sobic002G055700--Sobic003G382600 Sobic002G055700--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic002G055700--Sobic003G426400 Sobic002G353900 Sobic002G353900 Sobic002G055700--Sobic002G353900 Sobic004G148200 Sobic004G148200 Sobic002G055700--Sobic004G148200 Sobic002G055700--Sobic004G189400 Sobic002G338500 Sobic002G338500 Sobic002G055700--Sobic002G338500 Sobic001G367600 Sobic001G367600 Sobic002G055700--Sobic001G367600 Sobic009G184000--Sobic001G112200 Sobic009G184000--Sobic007G169700 Sobic006G235100 Sobic006G235100 Sobic009G184000--Sobic006G235100 Sobic001G502400 Sobic001G502400 Sobic009G184000--Sobic001G502400 Sobic003G228900 Sobic003G228900 Sobic009G184000--Sobic003G228900 Sobic003G432700 Sobic003G432700 Sobic009G184000--Sobic003G432700 Sobic009G184000--Sobic001G138600 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100 Sobic003G043500--Sobic009G145600 Sobic003G043500--Sobic008G066401 Sobic003G043500--Sobic009G145700 Sobic003G043500--Sobic006G054800 Sobic003G043500--Sobic007G169700 Sobic003G043500--Sobic008G139600 Sobic004G245700 Sobic004G245700 Sobic003G043500--Sobic004G245700 Sobic003G043500--Sobic001G112200 Sobic003G043500--Sobic009G184000 Sobic009G145600--Sobic009G145700 Sobic009G145600--Sobic008G066401 Sobic009G145600--Sobic008G066200 Sobic009G145600--Sobic003G079200 Sobic009G145600--Sobic006G008000 Sobic009G145600--Sobic003G043500 Sobic009G145600--Sobic004G245700 Sobic002G012500 Sobic002G012500 Sobic009G145600--Sobic002G012500 Sobic009G200566 Sobic009G200566 Sobic009G145600--Sobic009G200566
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.