Gene annotation
Transcriptome id Sobic.003G043500.1
Synonym
Functional annotation -
UniProt A0A1B6Q1A2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.008G066401 - -
3 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.006G054800 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in stay green (QSTG1_6) "(PubMedID : 24655390)@Glycerophosphodiester phosphodiesterase ( At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
5 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
6 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -
7 Sobic.004G245700 expressed protein -
8 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
10 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
12 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
13 Sobic.010G259300 transferase family protein, putative, expressed -
14 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
15 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
16 Sobic.009G151600 AP2 domain containing protein, expressed -
17 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
18 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
19 Sobic.009G200566 - -
20 Sobic.003G362700 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G043500 Sobic003G043500 Sobic009G145600 Sobic009G145600 Sobic003G043500--Sobic009G145600 Sobic008G066401 Sobic008G066401 Sobic003G043500--Sobic008G066401 Sobic009G145700 Sobic009G145700 Sobic003G043500--Sobic009G145700 Sobic006G054800 Sobic006G054800 Sobic003G043500--Sobic006G054800 Sobic007G169700 Sobic007G169700 Sobic003G043500--Sobic007G169700 Sobic008G139600 Sobic008G139600 Sobic003G043500--Sobic008G139600 Sobic004G245700 Sobic004G245700 Sobic003G043500--Sobic004G245700 Sobic001G112200 Sobic001G112200 Sobic003G043500--Sobic001G112200 Sobic009G184000 Sobic009G184000 Sobic003G043500--Sobic009G184000 Sobic009G145600--Sobic009G145700 Sobic009G145600--Sobic008G066401 Sobic008G066200 Sobic008G066200 Sobic009G145600--Sobic008G066200 Sobic003G079200 Sobic003G079200 Sobic009G145600--Sobic003G079200 Sobic006G008000 Sobic006G008000 Sobic009G145600--Sobic006G008000 Sobic009G145600--Sobic003G043500 Sobic009G145600--Sobic004G245700 Sobic002G012500 Sobic002G012500 Sobic009G145600--Sobic002G012500 Sobic009G200566 Sobic009G200566 Sobic009G145600--Sobic009G200566 Sobic008G066401--Sobic009G145700 Sobic008G066401--Sobic009G145600 Sobic008G066401--Sobic008G066200 Sobic008G066401--Sobic002G012500 Sobic008G066401--Sobic007G169700 Sobic008G066401--Sobic009G184000 Sobic008G066401--Sobic006G008000 Sobic008G066401--Sobic003G043500 Sobic003G362700 Sobic003G362700 Sobic008G066401--Sobic003G362700 Sobic009G145700--Sobic009G145600 Sobic009G145700--Sobic008G066401 Sobic009G145700--Sobic008G066200 Sobic009G145700--Sobic006G008000 Sobic009G145700--Sobic001G112200 Sobic003G043600 Sobic003G043600 Sobic009G145700--Sobic003G043600 Sobic009G145700--Sobic003G043500 Sobic009G145700--Sobic009G184000 Sobic009G145700--Sobic003G079200 Sobic006G054800--Sobic008G139600 Sobic006G054800--Sobic003G043500 Sobic006G054800--Sobic009G145700 Sobic006G054800--Sobic007G169700 Sobic004G141100 Sobic004G141100 Sobic006G054800--Sobic004G141100 Sobic006G054800--Sobic009G145600 Sobic006G054800--Sobic001G112200 Sobic006G054800--Sobic008G066401 Sobic006G054800--Sobic009G184000 Sobic007G169700--Sobic009G184000 Sobic007G169700--Sobic001G112200 Sobic007G169700--Sobic008G066401 Sobic003G432700 Sobic003G432700 Sobic007G169700--Sobic003G432700 Sobic007G169700--Sobic009G145700 Sobic001G138600 Sobic001G138600 Sobic007G169700--Sobic001G138600 Sobic001G318700 Sobic001G318700 Sobic007G169700--Sobic001G318700 Sobic007G169700--Sobic003G043500 Sobic006G235100 Sobic006G235100 Sobic007G169700--Sobic006G235100 Sobic008G139600--Sobic006G054800 Sobic004G321300 Sobic004G321300 Sobic008G139600--Sobic004G321300 Sobic008G139600--Sobic001G112200 Sobic004G237800 Sobic004G237800 Sobic008G139600--Sobic004G237800 Sobic008G139600--Sobic009G145700 Sobic002G055700 Sobic002G055700 Sobic008G139600--Sobic002G055700 Sobic008G139600--Sobic009G184000 Sobic008G139600--Sobic003G043500 Sobic008G139600--Sobic009G145600 Sobic004G245700--Sobic009G145600 Sobic004G245700--Sobic009G145700 Sobic004G245700--Sobic008G066401 Sobic004G245700--Sobic003G043500 Sobic009G184100 Sobic009G184100 Sobic004G245700--Sobic009G184100 Sobic004G245700--Sobic009G200566 Sobic009G145500 Sobic009G145500 Sobic004G245700--Sobic009G145500 Sobic004G245700--Sobic006G054800 Sobic004G245700--Sobic001G318700 Sobic001G112200--Sobic009G184000 Sobic001G112200--Sobic001G318700 Sobic001G112200--Sobic001G138600 Sobic003G369100 Sobic003G369100 Sobic001G112200--Sobic003G369100 Sobic001G112200--Sobic007G169700 Sobic001G112200--Sobic004G237800 Sobic001G112200--Sobic009G145700 Sobic007G074000 Sobic007G074000 Sobic001G112200--Sobic007G074000 Sobic001G310600 Sobic001G310600 Sobic001G112200--Sobic001G310600 Sobic009G184000--Sobic001G112200 Sobic009G184000--Sobic007G169700 Sobic009G184000--Sobic006G235100 Sobic001G502400 Sobic001G502400 Sobic009G184000--Sobic001G502400 Sobic003G228900 Sobic003G228900 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic009G184000--Sobic001G138600 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100
Octagon: transcription factors


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