Gene annotation
Transcriptome id Sobic.010G259300.1
Synonym Sb10g029590
Functional annotation transferase family protein, putative, expressed
UniProt C5Z9D5
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF49
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G17540 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os06g49660.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a018443
Brachypodium KQJ99965 , KQK17502
Barley HORVU7Hr1G095230.4 , HORVU7Hr1G095230.1 , HORVU7Hr1G095230.2 , HORVU7Hr1G095230.3
Wheat TraesCS7D02G401300 , TraesCS7B02G307700 , TraesCS7B02G307800 , TraesCS7A02G407600 , TraesCS7D02G401000 , TraesCS7A02G407500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
3 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
4 Sobic.006G054800 "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in stay green (QSTG1_6) "(PubMedID : 24655390)@Glycerophosphodiester phosphodiesterase ( At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
5 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -
6 Sobic.002G220000 expressed protein -
7 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
8 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
9 Sobic.003G043500 - -
10 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
11 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
12 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.004G245700 expressed protein -
14 Sobic.003G092900 expressed protein -
15 Sobic.003G268600 - -
16 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.006G240600 - -
18 Sobic.008G066401 - -
19 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
20 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic010G259300 Sobic010G259300 Sobic003G093000 Sobic003G093000 Sobic010G259300--Sobic003G093000 Sobic002G189100 Sobic002G189100 Sobic010G259300--Sobic002G189100 Sobic001G407800 Sobic001G407800 Sobic010G259300--Sobic001G407800 Sobic006G054800 Sobic006G054800 Sobic010G259300--Sobic006G054800 Sobic008G139600 Sobic008G139600 Sobic010G259300--Sobic008G139600 Sobic002G220000 Sobic002G220000 Sobic010G259300--Sobic002G220000 Sobic004G237800 Sobic004G237800 Sobic010G259300--Sobic004G237800 Sobic001G247300 Sobic001G247300 Sobic010G259300--Sobic001G247300 Sobic003G043500 Sobic003G043500 Sobic010G259300--Sobic003G043500 Sobic003G093000--Sobic002G220000 Sobic003G092900 Sobic003G092900 Sobic003G093000--Sobic003G092900 Sobic003G093000--Sobic002G189100 Sobic004G222500 Sobic004G222500 Sobic003G093000--Sobic004G222500 Sobic003G428700 Sobic003G428700 Sobic003G093000--Sobic003G428700 Sobic004G191400 Sobic004G191400 Sobic003G093000--Sobic004G191400 Sobic003G228900 Sobic003G228900 Sobic003G093000--Sobic003G228900 Sobic009G122400 Sobic009G122400 Sobic003G093000--Sobic009G122400 Sobic003G093000--Sobic010G259300 Sobic002G189100--Sobic003G228900 Sobic002G189100--Sobic003G093000 Sobic009G192600 Sobic009G192600 Sobic002G189100--Sobic009G192600 Sobic009G184000 Sobic009G184000 Sobic002G189100--Sobic009G184000 Sobic003G142300 Sobic003G142300 Sobic002G189100--Sobic003G142300 Sobic010G209200 Sobic010G209200 Sobic002G189100--Sobic010G209200 Sobic002G189100--Sobic002G220000 Sobic002G189100--Sobic004G191400 Sobic001G267600 Sobic001G267600 Sobic002G189100--Sobic001G267600 Sobic002G333400 Sobic002G333400 Sobic001G407800--Sobic002G333400 Sobic009G036100 Sobic009G036100 Sobic001G407800--Sobic009G036100 Sobic006G056400 Sobic006G056400 Sobic001G407800--Sobic006G056400 Sobic001G407800--Sobic004G237800 Sobic007G074000 Sobic007G074000 Sobic001G407800--Sobic007G074000 Sobic005G186100 Sobic005G186100 Sobic001G407800--Sobic005G186100 Sobic001G407800--Sobic010G259300 Sobic003G369100 Sobic003G369100 Sobic001G407800--Sobic003G369100 Sobic001G407800--Sobic008G139600 Sobic006G054800--Sobic008G139600 Sobic006G054800--Sobic003G043500 Sobic009G145700 Sobic009G145700 Sobic006G054800--Sobic009G145700 Sobic007G169700 Sobic007G169700 Sobic006G054800--Sobic007G169700 Sobic004G141100 Sobic004G141100 Sobic006G054800--Sobic004G141100 Sobic009G145600 Sobic009G145600 Sobic006G054800--Sobic009G145600 Sobic001G112200 Sobic001G112200 Sobic006G054800--Sobic001G112200 Sobic008G066401 Sobic008G066401 Sobic006G054800--Sobic008G066401 Sobic006G054800--Sobic009G184000 Sobic008G139600--Sobic006G054800 Sobic004G321300 Sobic004G321300 Sobic008G139600--Sobic004G321300 Sobic008G139600--Sobic001G112200 Sobic008G139600--Sobic004G237800 Sobic008G139600--Sobic009G145700 Sobic002G055700 Sobic002G055700 Sobic008G139600--Sobic002G055700 Sobic008G139600--Sobic009G184000 Sobic008G139600--Sobic003G043500 Sobic008G139600--Sobic009G145600 Sobic002G220000--Sobic003G093000 Sobic001G035100 Sobic001G035100 Sobic002G220000--Sobic001G035100 Sobic001G330400 Sobic001G330400 Sobic002G220000--Sobic001G330400 Sobic002G220000--Sobic003G428700 Sobic002G220000--Sobic003G092900 Sobic002G220000--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic002G220000--Sobic004G169200 Sobic002G220000--Sobic002G189100 Sobic004G219800 Sobic004G219800 Sobic002G220000--Sobic004G219800 Sobic004G237800--Sobic007G074000 Sobic004G237800--Sobic004G321300 Sobic002G336600 Sobic002G336600 Sobic004G237800--Sobic002G336600 Sobic004G189400 Sobic004G189400 Sobic004G237800--Sobic004G189400 Sobic004G237800--Sobic002G055700 Sobic002G140400 Sobic002G140400 Sobic004G237800--Sobic002G140400 Sobic005G091500 Sobic005G091500 Sobic004G237800--Sobic005G091500 Sobic004G237800--Sobic001G112200 Sobic005G063100 Sobic005G063100 Sobic004G237800--Sobic005G063100 Sobic005G196800 Sobic005G196800 Sobic001G247300--Sobic005G196800 Sobic003G043600 Sobic003G043600 Sobic001G247300--Sobic003G043600 Sobic001G247300--Sobic003G092900 Sobic001G247300--Sobic004G237800 Sobic001G247300--Sobic009G184000 Sobic006G183400 Sobic006G183400 Sobic001G247300--Sobic006G183400 Sobic002G338500 Sobic002G338500 Sobic001G247300--Sobic002G338500 Sobic001G247300--Sobic007G074000 Sobic003G382600 Sobic003G382600 Sobic001G247300--Sobic003G382600 Sobic003G043500--Sobic009G145600 Sobic003G043500--Sobic008G066401 Sobic003G043500--Sobic009G145700 Sobic003G043500--Sobic006G054800 Sobic003G043500--Sobic007G169700 Sobic003G043500--Sobic008G139600 Sobic004G245700 Sobic004G245700 Sobic003G043500--Sobic004G245700 Sobic003G043500--Sobic001G112200 Sobic003G043500--Sobic009G184000
Octagon: transcription factors


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