Gene annotation
Transcriptome id Sobic.003G158500.1
Synonym Sb03g013810
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
abscisic stress-ripening, putative, expressed
UniProt A0A1B6Q3F6
Pfam PF02496
Panther DB PTHR33801 PTHR33801:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g72900.1 : abscisic stress-ripening, putative, expressed
MaizeGDB (Corn) Zm00025a024490 , Zm00025a024491 , Zm00025a024489
Brachypodium -
Barley HORVU3Hr1G112140.1 , HORVU3Hr1G112140.2 , HORVU3Hr1G112080.5 , HORVU3Hr1G112080.4 , HORVU3Hr1G112080.6 , HORVU3Hr1G112080.1 , HORVU3Hr1G112080.3 , HORVU3Hr1G112080.2 , HORVU3Hr1G112090.2 , HORVU3Hr1G112090.3 , HORVU3Hr1G112090.1 , HORVU3Hr1G112060.2 , HORVU3Hr1G112060.1 , HORVU3Hr1G112050.2 , HORVU3Hr1G112050.3 , HORVU3Hr1G112050.1 , HORVU3Hr1G112030.3
Wheat TraesCS3D02G517600 , TraesCS3D02G517500 , TraesCS3A02G509700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
2 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.002G245100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
4 Sobic.010G259300 transferase family protein, putative, expressed -
5 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
6 Sobic.002G356101 - -
7 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
8 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
9 Sobic.001G538866 - -
10 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
11 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
12 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
13 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
14 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -
15 Sobic.002G055600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
16 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
17 Sobic.003G092900 expressed protein -
18 Sobic.002G202600 joka8, putative, expressed -
19 Sobic.001G119000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase


Gene co-expression network
sample Sobic003G158500 Sobic003G158500 Sobic001G040200 Sobic001G040200 Sobic003G158500--Sobic001G040200 Sobic002G140300 Sobic002G140300 Sobic003G158500--Sobic002G140300 Sobic002G245100 Sobic002G245100 Sobic003G158500--Sobic002G245100 Sobic010G259300 Sobic010G259300 Sobic003G158500--Sobic010G259300 Sobic001G407800 Sobic001G407800 Sobic003G158500--Sobic001G407800 Sobic002G356101 Sobic002G356101 Sobic003G158500--Sobic002G356101 Sobic007G151100 Sobic007G151100 Sobic003G158500--Sobic007G151100 Sobic003G430400 Sobic003G430400 Sobic003G158500--Sobic003G430400 Sobic001G538866 Sobic001G538866 Sobic003G158500--Sobic001G538866 Sobic001G040200--Sobic002G140300 Sobic002G359300 Sobic002G359300 Sobic001G040200--Sobic002G359300 Sobic003G324400 Sobic003G324400 Sobic001G040200--Sobic003G324400 Sobic001G040200--Sobic003G430400 Sobic001G040200--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic001G040200--Sobic009G036100 Sobic001G040200--Sobic003G158500 Sobic006G179500 Sobic006G179500 Sobic001G040200--Sobic006G179500 Sobic002G245800 Sobic002G245800 Sobic001G040200--Sobic002G245800 Sobic002G140300--Sobic006G179500 Sobic002G140300--Sobic001G040200 Sobic006G165100 Sobic006G165100 Sobic002G140300--Sobic006G165100 Sobic004G222500 Sobic004G222500 Sobic002G140300--Sobic004G222500 Sobic002G140300--Sobic001G538866 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic005G018700 Sobic005G018700 Sobic002G245100--Sobic005G018700 Sobic003G037800 Sobic003G037800 Sobic002G245100--Sobic003G037800 Sobic004G237800 Sobic004G237800 Sobic002G245100--Sobic004G237800 Sobic002G202600 Sobic002G202600 Sobic002G245100--Sobic002G202600 Sobic005G196800 Sobic005G196800 Sobic002G245100--Sobic005G196800 Sobic004G340900 Sobic004G340900 Sobic002G245100--Sobic004G340900 Sobic004G321300 Sobic004G321300 Sobic002G245100--Sobic004G321300 Sobic002G245100--Sobic003G158500 Sobic001G107400 Sobic001G107400 Sobic002G245100--Sobic001G107400 Sobic003G093000 Sobic003G093000 Sobic010G259300--Sobic003G093000 Sobic002G189100 Sobic002G189100 Sobic010G259300--Sobic002G189100 Sobic010G259300--Sobic001G407800 Sobic006G054800 Sobic006G054800 Sobic010G259300--Sobic006G054800 Sobic008G139600 Sobic008G139600 Sobic010G259300--Sobic008G139600 Sobic002G220000 Sobic002G220000 Sobic010G259300--Sobic002G220000 Sobic010G259300--Sobic004G237800 Sobic001G247300 Sobic001G247300 Sobic010G259300--Sobic001G247300 Sobic003G043500 Sobic003G043500 Sobic010G259300--Sobic003G043500 Sobic002G333400 Sobic002G333400 Sobic001G407800--Sobic002G333400 Sobic001G407800--Sobic009G036100 Sobic006G056400 Sobic006G056400 Sobic001G407800--Sobic006G056400 Sobic001G407800--Sobic004G237800 Sobic007G074000 Sobic007G074000 Sobic001G407800--Sobic007G074000 Sobic005G186100 Sobic005G186100 Sobic001G407800--Sobic005G186100 Sobic001G407800--Sobic010G259300 Sobic003G369100 Sobic003G369100 Sobic001G407800--Sobic003G369100 Sobic001G407800--Sobic008G139600 Sobic010G086200 Sobic010G086200 Sobic002G356101--Sobic010G086200 Sobic002G356101--Sobic007G074000 Sobic004G065500 Sobic004G065500 Sobic002G356101--Sobic004G065500 Sobic002G356101--Sobic001G247300 Sobic002G356101--Sobic009G247900 Sobic002G356101--Sobic003G430400 Sobic009G184000 Sobic009G184000 Sobic002G356101--Sobic009G184000 Sobic002G356101--Sobic005G196800 Sobic009G200700 Sobic009G200700 Sobic002G356101--Sobic009G200700 Sobic001G516600 Sobic001G516600 Sobic007G151100--Sobic001G516600 Sobic007G151100--Sobic003G158500 Sobic007G151100--Sobic002G356101 Sobic007G151100--Sobic001G538866 Sobic005G028700 Sobic005G028700 Sobic007G151100--Sobic005G028700 Sobic007G151100--Sobic002G140300 Sobic007G151100--Sobic002G245100 Sobic001G513700 Sobic001G513700 Sobic007G151100--Sobic001G513700 Sobic002G036100 Sobic002G036100 Sobic007G151100--Sobic002G036100 Sobic002G263400 Sobic002G263400 Sobic003G430400--Sobic002G263400 Sobic002G140400 Sobic002G140400 Sobic003G430400--Sobic002G140400 Sobic003G430400--Sobic001G040200 Sobic006G066200 Sobic006G066200 Sobic003G430400--Sobic006G066200 Sobic003G430400--Sobic002G140300 Sobic003G430400--Sobic007G074000 Sobic003G092900 Sobic003G092900 Sobic003G430400--Sobic003G092900 Sobic003G430400--Sobic002G356101 Sobic003G430400--Sobic004G222500 Sobic001G538866--Sobic002G140300 Sobic001G538866--Sobic001G040200 Sobic004G280900 Sobic004G280900 Sobic001G538866--Sobic004G280900 Sobic001G538866--Sobic002G036100 Sobic001G538866--Sobic003G324400 Sobic001G538866--Sobic006G165100 Sobic001G077400 Sobic001G077400 Sobic001G538866--Sobic001G077400 Sobic001G538866--Sobic007G151100 Sobic001G538866--Sobic009G200700
Octagon: transcription factors


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