Gene annotation
Transcriptome id Sobic.003G092900.1
Synonym Sb03g007770
Functional annotation expressed protein
UniProt C5XE72
Pfam -
Panther DB PTHR33782 PTHR33782:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01300 : -
RAP-DB (Rice) LOC_Os01g03130.1 : expressed protein
MaizeGDB (Corn) Zm00025a023669
Brachypodium KQK02466
Barley HORVU3Hr1G005800.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
3 Sobic.002G220000 expressed protein -
4 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
5 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.003G430400 OsCML31 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
7 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
8 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
9 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
10 Sobic.001G095300 prenylated rab acceptor, putative, expressed -
11 Sobic.010G259300 transferase family protein, putative, expressed -
12 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
13 Sobic.002G356101 - -
14 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
15 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
16 Sobic.003G050300 peroxidases (PubMedID : 28944535)@peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G538866 - -
19 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
20 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G092900 Sobic003G092900 Sobic003G093000 Sobic003G093000 Sobic003G092900--Sobic003G093000 Sobic004G222500 Sobic004G222500 Sobic003G092900--Sobic004G222500 Sobic002G220000 Sobic002G220000 Sobic003G092900--Sobic002G220000 Sobic001G247300 Sobic001G247300 Sobic003G092900--Sobic001G247300 Sobic002G140300 Sobic002G140300 Sobic003G092900--Sobic002G140300 Sobic003G430400 Sobic003G430400 Sobic003G092900--Sobic003G430400 Sobic009G247900 Sobic009G247900 Sobic003G092900--Sobic009G247900 Sobic001G267600 Sobic001G267600 Sobic003G092900--Sobic001G267600 Sobic002G189100 Sobic002G189100 Sobic003G092900--Sobic002G189100 Sobic003G093000--Sobic002G220000 Sobic003G093000--Sobic003G092900 Sobic003G093000--Sobic002G189100 Sobic003G093000--Sobic004G222500 Sobic003G428700 Sobic003G428700 Sobic003G093000--Sobic003G428700 Sobic004G191400 Sobic004G191400 Sobic003G093000--Sobic004G191400 Sobic003G228900 Sobic003G228900 Sobic003G093000--Sobic003G228900 Sobic009G122400 Sobic009G122400 Sobic003G093000--Sobic009G122400 Sobic010G259300 Sobic010G259300 Sobic003G093000--Sobic010G259300 Sobic004G222500--Sobic002G140300 Sobic004G222500--Sobic003G093000 Sobic004G222500--Sobic003G092900 Sobic004G222500--Sobic003G428700 Sobic006G183400 Sobic006G183400 Sobic004G222500--Sobic006G183400 Sobic004G222500--Sobic009G247900 Sobic001G035100 Sobic001G035100 Sobic004G222500--Sobic001G035100 Sobic004G222500--Sobic002G220000 Sobic006G179500 Sobic006G179500 Sobic004G222500--Sobic006G179500 Sobic002G220000--Sobic003G093000 Sobic002G220000--Sobic001G035100 Sobic001G330400 Sobic001G330400 Sobic002G220000--Sobic001G330400 Sobic002G220000--Sobic003G428700 Sobic002G220000--Sobic003G092900 Sobic002G220000--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic002G220000--Sobic004G169200 Sobic002G220000--Sobic002G189100 Sobic004G219800 Sobic004G219800 Sobic002G220000--Sobic004G219800 Sobic005G196800 Sobic005G196800 Sobic001G247300--Sobic005G196800 Sobic003G043600 Sobic003G043600 Sobic001G247300--Sobic003G043600 Sobic001G247300--Sobic003G092900 Sobic004G237800 Sobic004G237800 Sobic001G247300--Sobic004G237800 Sobic009G184000 Sobic009G184000 Sobic001G247300--Sobic009G184000 Sobic001G247300--Sobic006G183400 Sobic002G338500 Sobic002G338500 Sobic001G247300--Sobic002G338500 Sobic007G074000 Sobic007G074000 Sobic001G247300--Sobic007G074000 Sobic003G382600 Sobic003G382600 Sobic001G247300--Sobic003G382600 Sobic002G140300--Sobic006G179500 Sobic001G040200 Sobic001G040200 Sobic002G140300--Sobic001G040200 Sobic006G165100 Sobic006G165100 Sobic002G140300--Sobic006G165100 Sobic002G140300--Sobic004G222500 Sobic001G538866 Sobic001G538866 Sobic002G140300--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic002G140300--Sobic009G036100 Sobic002G140300--Sobic006G183400 Sobic003G324400 Sobic003G324400 Sobic002G140300--Sobic003G324400 Sobic002G140300--Sobic009G247900 Sobic002G263400 Sobic002G263400 Sobic003G430400--Sobic002G263400 Sobic002G140400 Sobic002G140400 Sobic003G430400--Sobic002G140400 Sobic003G430400--Sobic001G040200 Sobic006G066200 Sobic006G066200 Sobic003G430400--Sobic006G066200 Sobic003G430400--Sobic002G140300 Sobic003G430400--Sobic007G074000 Sobic003G430400--Sobic003G092900 Sobic002G356101 Sobic002G356101 Sobic003G430400--Sobic002G356101 Sobic003G430400--Sobic004G222500 Sobic009G247900--Sobic007G074000 Sobic003G202200 Sobic003G202200 Sobic009G247900--Sobic003G202200 Sobic001G383700 Sobic001G383700 Sobic009G247900--Sobic001G383700 Sobic009G247900--Sobic003G228900 Sobic009G247900--Sobic003G428700 Sobic010G209200 Sobic010G209200 Sobic009G247900--Sobic010G209200 Sobic009G247900--Sobic009G036100 Sobic009G036000 Sobic009G036000 Sobic009G247900--Sobic009G036000 Sobic004G341800 Sobic004G341800 Sobic009G247900--Sobic004G341800 Sobic001G267600--Sobic003G093000 Sobic001G267600--Sobic002G189100 Sobic003G064200 Sobic003G064200 Sobic001G267600--Sobic003G064200 Sobic003G268600 Sobic003G268600 Sobic001G267600--Sobic003G268600 Sobic001G267600--Sobic001G247300 Sobic009G192600 Sobic009G192600 Sobic001G267600--Sobic009G192600 Sobic001G267600--Sobic003G092900 Sobic003G050300 Sobic003G050300 Sobic001G267600--Sobic003G050300 Sobic001G267600--Sobic010G259300 Sobic002G189100--Sobic003G228900 Sobic002G189100--Sobic003G093000 Sobic002G189100--Sobic009G192600 Sobic002G189100--Sobic009G184000 Sobic003G142300 Sobic003G142300 Sobic002G189100--Sobic003G142300 Sobic002G189100--Sobic010G209200 Sobic002G189100--Sobic002G220000 Sobic002G189100--Sobic004G191400 Sobic002G189100--Sobic001G267600
Octagon: transcription factors


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