Gene annotation
Transcriptome id Sobic.001G095300.1
Synonym Sb01g008530, PRA1.B6
Functional annotation prenylated rab acceptor, putative, expressed
UniProt C5X192
Pfam PF03208
Panther DB PTHR19317 PTHR19317:SF3
NCBI CDD KOG3142; Prenylated rab acceptor 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55190 : PRA1 (Prenylated rab acceptor) family protein
RAP-DB (Rice) LOC_Os03g53070.1 : prenylated rab acceptor, putative, expressed
MaizeGDB (Corn) Zm00025a008087 , Zm00025a016841 , Zm00025a006309 , Zm00025a013730
Brachypodium KQK13285
Barley HORVU0Hr1G013770.1
Wheat TraesCS5A02G381200
Populus -


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cDNA sequences
Sobic.001G095300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
2 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G092900 expressed protein -
4 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
5 Sobic.002G405600 early response to dehydration 15, putative, expressed -
6 Sobic.001G538866 - -
7 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
8 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
9 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
10 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
11 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
12 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
13 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
14 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
15 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
16 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
17 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
18 Sobic.001G422900 zinc finger family protein, putative, expressed -
19 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
20 Sobic.010G223600 ubiquitin family protein, putative, expressed K08770: ubiquitin C


Gene co-expression network
sample Sobic001G095300 Sobic001G095300 Sobic010G204600 Sobic010G204600 Sobic001G095300--Sobic010G204600 Sobic002G140300 Sobic002G140300 Sobic001G095300--Sobic002G140300 Sobic003G092900 Sobic003G092900 Sobic001G095300--Sobic003G092900 Sobic003G324400 Sobic003G324400 Sobic001G095300--Sobic003G324400 Sobic002G405600 Sobic002G405600 Sobic001G095300--Sobic002G405600 Sobic001G538866 Sobic001G538866 Sobic001G095300--Sobic001G538866 Sobic002G245800 Sobic002G245800 Sobic001G095300--Sobic002G245800 Sobic009G129000 Sobic009G129000 Sobic001G095300--Sobic009G129000 Sobic006G179500 Sobic006G179500 Sobic001G095300--Sobic006G179500 Sobic010G204600--Sobic001G095300 Sobic003G063200 Sobic003G063200 Sobic010G204600--Sobic003G063200 Sobic010G204600--Sobic002G405600 Sobic004G157000 Sobic004G157000 Sobic010G204600--Sobic004G157000 Sobic009G023200 Sobic009G023200 Sobic010G204600--Sobic009G023200 Sobic010G204600--Sobic009G129000 Sobic001G055600 Sobic001G055600 Sobic010G204600--Sobic001G055600 Sobic003G202200 Sobic003G202200 Sobic010G204600--Sobic003G202200 Sobic009G033700 Sobic009G033700 Sobic010G204600--Sobic009G033700 Sobic002G140300--Sobic006G179500 Sobic001G040200 Sobic001G040200 Sobic002G140300--Sobic001G040200 Sobic006G165100 Sobic006G165100 Sobic002G140300--Sobic006G165100 Sobic004G222500 Sobic004G222500 Sobic002G140300--Sobic004G222500 Sobic002G140300--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic003G093000 Sobic003G093000 Sobic003G092900--Sobic003G093000 Sobic003G092900--Sobic004G222500 Sobic002G220000 Sobic002G220000 Sobic003G092900--Sobic002G220000 Sobic001G247300 Sobic001G247300 Sobic003G092900--Sobic001G247300 Sobic003G092900--Sobic002G140300 Sobic003G430400 Sobic003G430400 Sobic003G092900--Sobic003G430400 Sobic003G092900--Sobic009G247900 Sobic001G267600 Sobic001G267600 Sobic003G092900--Sobic001G267600 Sobic002G189100 Sobic002G189100 Sobic003G092900--Sobic002G189100 Sobic003G324400--Sobic006G165100 Sobic003G324400--Sobic001G040200 Sobic003G324400--Sobic002G140300 Sobic003G324400--Sobic009G036100 Sobic006G263600 Sobic006G263600 Sobic003G324400--Sobic006G263600 Sobic003G324400--Sobic009G247900 Sobic003G324400--Sobic002G405600 Sobic003G313800 Sobic003G313800 Sobic003G324400--Sobic003G313800 Sobic002G282300 Sobic002G282300 Sobic003G324400--Sobic002G282300 Sobic002G405600--Sobic002G245800 Sobic002G405600--Sobic003G324400 Sobic002G405600--Sobic003G202200 Sobic002G405600--Sobic010G204600 Sobic002G405600--Sobic009G247900 Sobic010G267600 Sobic010G267600 Sobic002G405600--Sobic010G267600 Sobic002G405600--Sobic006G263600 Sobic001G259700 Sobic001G259700 Sobic002G405600--Sobic001G259700 Sobic002G405600--Sobic001G095300 Sobic001G538866--Sobic002G140300 Sobic001G538866--Sobic001G040200 Sobic004G280900 Sobic004G280900 Sobic001G538866--Sobic004G280900 Sobic002G036100 Sobic002G036100 Sobic001G538866--Sobic002G036100 Sobic001G538866--Sobic003G324400 Sobic001G538866--Sobic006G165100 Sobic001G077400 Sobic001G077400 Sobic001G538866--Sobic001G077400 Sobic007G151100 Sobic007G151100 Sobic001G538866--Sobic007G151100 Sobic009G200700 Sobic009G200700 Sobic001G538866--Sobic009G200700 Sobic002G245800--Sobic002G405600 Sobic002G245800--Sobic001G040200 Sobic002G245800--Sobic003G324400 Sobic002G245800--Sobic009G247900 Sobic001G422900 Sobic001G422900 Sobic002G245800--Sobic001G422900 Sobic002G245800--Sobic009G023200 Sobic002G245800--Sobic001G095300 Sobic002G245800--Sobic002G140300 Sobic002G245800--Sobic006G179500 Sobic010G086200 Sobic010G086200 Sobic009G129000--Sobic010G086200 Sobic005G028700 Sobic005G028700 Sobic009G129000--Sobic005G028700 Sobic009G183300 Sobic009G183300 Sobic009G129000--Sobic009G183300 Sobic009G129000--Sobic009G033700 Sobic009G129000--Sobic009G200700 Sobic004G065500 Sobic004G065500 Sobic009G129000--Sobic004G065500 Sobic010G217800 Sobic010G217800 Sobic009G129000--Sobic010G217800 Sobic006G267200 Sobic006G267200 Sobic009G129000--Sobic006G267200 Sobic009G129000--Sobic010G204600 Sobic006G179500--Sobic002G140300 Sobic002G359300 Sobic002G359300 Sobic006G179500--Sobic002G359300 Sobic006G179500--Sobic006G183400 Sobic006G179500--Sobic001G040200 Sobic006G179500--Sobic004G222500 Sobic003G300800 Sobic003G300800 Sobic006G179500--Sobic003G300800 Sobic006G179500--Sobic003G430400 Sobic006G179500--Sobic006G165100 Sobic006G089300 Sobic006G089300 Sobic006G179500--Sobic006G089300
Octagon: transcription factors


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