Gene annotation
Transcriptome id Sobic.010G223600.2,Sobic.010G223600.1
Synonym UBQ10, Sb10g026870
Functional annotation ubiquitin family protein, putative, expressed
UniProt A0A1W0VUB7
Pfam PF11976
Panther DB PTHR10666 PTHR10666:SF155 PTHR10666
NCBI CDD KOG0005; Ubiquitin-like protein KOG0001Ubiquitin and ubiquitin-like proteins KOG0001Ubiquitin and ubiquitin-like proteins
KEGG Orthology K08770; ubiquitin C
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G05320 : polyubiquitin 10
RAP-DB (Rice) LOC_Os06g46770.1 : ubiquitin family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK17173 , KQK17147 , KQK17095 , KQJ95133 , KQJ89932 , KQJ93343 , KQK16153
Barley HORVU6Hr1G026280.8 , HORVU6Hr1G026280.9 , HORVU6Hr1G026280.6 , HORVU6Hr1G026280.7 , HORVU6Hr1G026280.4 , HORVU6Hr1G026280.5 , HORVU6Hr1G026280.2 , HORVU7Hr1G103170.19 , HORVU7Hr1G103170.18 , HORVU7Hr1G103170.17 , HORVU7Hr1G103170.16 , HORVU7Hr1G103170.14 , HORVU7Hr1G103170.13 , HORVU7Hr1G103170.12 , HORVU7Hr1G103170.11 , HORVU7Hr1G103170.10 , HORVU7Hr1G102840.10 , HORVU7Hr1G102840.11 , HORVU5Hr1G019590.13 , HORVU5Hr1G019590.12 , HORVU5Hr1G019590.11 , HORVU5Hr1G019590.10 , HORVU5Hr1G019590.15 , HORVU5Hr1G019590.14 , HORVU2Hr1G104410.9 , HORVU2Hr1G104410.1 , HORVU2Hr1G104410.2 , HORVU2Hr1G104410.3 , HORVU2Hr1G104410.4 , HORVU2Hr1G104410.5 , HORVU2Hr1G104410.6 , HORVU2Hr1G104410.7 , HORVU6Hr1G020140.8 , HORVU6Hr1G020140.7 , HORVU6Hr1G020140.6 , HORVU6Hr1G020140.4 , HORVU6Hr1G020140.3 , HORVU6Hr1G020140.2 , HORVU6Hr1G020140.1 , HORVU6Hr1G026260.1 , HORVU2Hr1G104410.12 , HORVU2Hr1G104410.13 , HORVU2Hr1G104410.10 , HORVU2Hr1G104410.11 , HORVU2Hr1G104410.16 , HORVU2Hr1G104410.17 , HORVU2Hr1G104410.14 , HORVU2Hr1G104410.15 , HORVU2Hr1G104410.18 , HORVU2Hr1G104410.19 , HORVU5Hr1G019600.8 , HORVU5Hr1G019600.3 , HORVU5Hr1G019600.2 , HORVU5Hr1G019600.1 , HORVU5Hr1G019600.7 , HORVU5Hr1G019600.6 , HORVU5Hr1G019600.5 , HORVU5Hr1G019600.4 , HORVU6Hr1G026260.18 , HORVU6Hr1G026260.19 , HORVU6Hr1G026260.16 , HORVU6Hr1G026260.17 , HORVU6Hr1G026260.14 , HORVU6Hr1G026260.12 , HORVU6Hr1G026260.13 , HORVU6Hr1G026260.10 , HORVU7Hr1G103550.2 , HORVU7Hr1G103550.4 , HORVU6Hr1G026200.6 , HORVU6Hr1G026200.4 , HORVU6Hr1G026200.5 , HORVU6Hr1G026200.2 , HORVU6Hr1G026200.3 , HORVU6Hr1G026200.1 , HORVU6Hr1G026200.8 , HORVU7Hr1G102840.4 , HORVU7Hr1G102840.5 , HORVU7Hr1G102840.6 , HORVU7Hr1G102840.7 , HORVU6Hr1G026260.8 , HORVU7Hr1G102840.1 , HORVU7Hr1G102840.2 , HORVU7Hr1G102840.3 , HORVU6Hr1G026260.6 , HORVU6Hr1G026260.7 , HORVU7Hr1G102840.8 , HORVU7Hr1G102840.9 , HORVU6Hr1G026260.2 , HORVU7Hr1G103330.10 , HORVU7Hr1G103330.13 , HORVU7Hr1G103330.14 , HORVU6Hr1G026200.18 , HORVU6Hr1G026200.19 , HORVU6Hr1G026200.15 , HORVU6Hr1G026200.16 , HORVU6Hr1G026200.17 , HORVU6Hr1G026200.10 , HORVU6Hr1G026200.11 , HORVU6Hr1G026200.13 , HORVU2Hr1G104410.23 , HORVU2Hr1G104410.22 , HORVU2Hr1G104410.21 , HORVU2Hr1G104410.20 , HORVU2Hr1G104410.26 , HORVU2Hr1G104410.25 , HORVU7Hr1G107010.1 , HORVU6Hr1G026260.20 , HORVU7Hr1G103330.9 , HORVU7Hr1G103330.8 , HORVU7Hr1G103330.5 , HORVU7Hr1G103330.4 , HORVU7Hr1G103330.7 , HORVU7Hr1G103330.6 , HORVU7Hr1G103330.1 , HORVU7Hr1G103330.3 , HORVU7Hr1G103330.2 , HORVU7Hr1G103160.1 , HORVU7Hr1G103160.2 , HORVU7Hr1G103160.3 , HORVU7Hr1G103160.4 , HORVU6Hr1G016150.5 , HORVU6Hr1G016150.4 , HORVU6Hr1G016150.1 , HORVU6Hr1G016150.3 , HORVU6Hr1G016150.2 , HORVU4Hr1G040980.1 , HORVU6Hr1G021700.4 , HORVU6Hr1G021700.2 , HORVU6Hr1G021700.3 , HORVU5Hr1G019590.9 , HORVU5Hr1G019590.8 , HORVU5Hr1G019590.3 , HORVU5Hr1G019590.2 , HORVU5Hr1G019590.1 , HORVU5Hr1G019590.7 , HORVU5Hr1G019590.6 , HORVU5Hr1G019590.5 , HORVU5Hr1G019590.4 , HORVU7Hr1G103380.2 , HORVU0Hr1G025670.1 , HORVU0Hr1G025670.2 , HORVU0Hr1G025670.5 , HORVU7Hr1G103170.3 , HORVU7Hr1G103170.2 , HORVU7Hr1G103170.1 , HORVU7Hr1G103170.9 , HORVU6Hr1G026280.10 , HORVU6Hr1G026280.11 , HORVU6Hr1G026200.20 , HORVU0Hr1G038500.1 , HORVU0Hr1G038500.2 , HORVU0Hr1G038500.3 , HORVU7Hr1G109650.1 , HORVU7Hr1G109650.2 , HORVU7Hr1G103380.1 , HORVU2Hr1G104410.24 , HORVU2Hr1G048820.1 , HORVU7Hr1G103170.22 , HORVU7Hr1G103170.20 , HORVU7Hr1G103170.21 , HORVU1Hr1G082070.1 , HORVU6Hr1G014910.1 , HORVU2Hr1G048830.1 , HORVU6Hr1G014970.1 , HORVU6Hr1G014970.3 , HORVU6Hr1G014970.2 , HORVU6Hr1G014970.5 , HORVU6Hr1G014970.4 , HORVU6Hr1G014970.7 , HORVU6Hr1G014970.6 , HORVU6Hr1G014970.8
Wheat TraesCS6D02G109600 , TraesCS7D02G443100 , TraesCS7A02G453300 , TraesCS6A02G136700 , TraesCS7A02G466500 , TraesCS2A02G408500 , TraesCS2D02G405500 , TraesCS2B02G426500 , TraesCS5D02G087500 , TraesCS6A02G087800 , TraesCS7B02G366700 , TraesCS6A02G148100 , TraesCS6A02G119700 , TraesCSU02G018500 , TraesCS6A02G266000 , TraesCS5B02G080200 , TraesCS7B02G366600 , TraesCS7B02G354000 , TraesCS7B02G354000 , TraesCS6A02G087100 , TraesCS7B02G354200 , TraesCS7B02G354100 , TraesCS6B02G110300 , TraesCS7A02G453600 , TraesCS6D02G137400 , TraesCS6A02G112400 , TraesCS6B02G140600 , TraesCS6D02G248600 , TraesCS7D02G024600 , TraesCS7A02G453500 , TraesCSU02G019400 , TraesCS5A02G073800 , TraesCS6D02G125600 , TraesCS7D02G453100 , TraesCS2A02G408200 , TraesCS7A02G453400 , TraesCS2A02G458100 , TraesCS6B02G176400
Populus PNT59589 , PNT59588 , PNT39174 , PNT39175 , PNT39172 , PNT39173 , PNT39170 , PNT39171 , PNT35854 , PNS95081 , PNS95082 , PNS95078 , PNS95079 , PNS95075 , PNS95076 , PNS95077 , PNT13284 , PNT13285 , PNT13286 , PNT13287 , PNT13281 , PNT13282 , PNT13283 , PNT13288 , PNT13289 , PNT13292 , PNT13291 , PNT13290 , PNT56764 , PNT56763 , PNT50492 , PNT59598 , PNT59599 , PNT59596 , PNT59597 , PNT59594 , PNT59595 , PNT59592 , PNT59593 , PNT59590 , PNT59591 , PNT59600


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
2 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
3 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
4 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
5 Sobic.009G122400 expressed protein -
6 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
7 Sobic.001G471200 membrane protein, putative, expressed -
8 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
9 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
10 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
12 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
13 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
14 Sobic.004G341800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin family protein, putative, expressed -
15 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
16 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G108200 expressed protein -
18 Sobic.008G187001 - K09422: transcription factor MYB, plant
19 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
20 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -


Gene co-expression network
sample Sobic010G223600 Sobic010G223600 Sobic003G393900 Sobic003G393900 Sobic010G223600--Sobic003G393900 Sobic009G036000 Sobic009G036000 Sobic010G223600--Sobic009G036000 Sobic009G247900 Sobic009G247900 Sobic010G223600--Sobic009G247900 Sobic002G339000 Sobic002G339000 Sobic010G223600--Sobic002G339000 Sobic009G122400 Sobic009G122400 Sobic010G223600--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic010G223600--Sobic004G169200 Sobic001G471200 Sobic001G471200 Sobic010G223600--Sobic001G471200 Sobic009G224100 Sobic009G224100 Sobic010G223600--Sobic009G224100 Sobic001G035100 Sobic001G035100 Sobic010G223600--Sobic001G035100 Sobic004G141200 Sobic004G141200 Sobic003G393900--Sobic004G141200 Sobic001G108200 Sobic001G108200 Sobic003G393900--Sobic001G108200 Sobic001G459800 Sobic001G459800 Sobic003G393900--Sobic001G459800 Sobic004G100700 Sobic004G100700 Sobic003G393900--Sobic004G100700 Sobic002G188900 Sobic002G188900 Sobic003G393900--Sobic002G188900 Sobic004G065500 Sobic004G065500 Sobic003G393900--Sobic004G065500 Sobic006G267200 Sobic006G267200 Sobic003G393900--Sobic006G267200 Sobic005G011300 Sobic005G011300 Sobic003G393900--Sobic005G011300 Sobic003G369100 Sobic003G369100 Sobic003G393900--Sobic003G369100 Sobic001G320900 Sobic001G320900 Sobic009G036000--Sobic001G320900 Sobic009G036100 Sobic009G036100 Sobic009G036000--Sobic009G036100 Sobic009G036000--Sobic009G247900 Sobic001G383700 Sobic001G383700 Sobic009G036000--Sobic001G383700 Sobic003G364600 Sobic003G364600 Sobic009G036000--Sobic003G364600 Sobic007G074000 Sobic007G074000 Sobic009G036000--Sobic007G074000 Sobic001G308300 Sobic001G308300 Sobic009G036000--Sobic001G308300 Sobic001G391500 Sobic001G391500 Sobic009G036000--Sobic001G391500 Sobic009G036000--Sobic004G169200 Sobic009G247900--Sobic007G074000 Sobic003G202200 Sobic003G202200 Sobic009G247900--Sobic003G202200 Sobic009G247900--Sobic001G383700 Sobic003G228900 Sobic003G228900 Sobic009G247900--Sobic003G228900 Sobic003G428700 Sobic003G428700 Sobic009G247900--Sobic003G428700 Sobic010G209200 Sobic010G209200 Sobic009G247900--Sobic010G209200 Sobic009G247900--Sobic009G036100 Sobic009G247900--Sobic009G036000 Sobic004G341800 Sobic004G341800 Sobic009G247900--Sobic004G341800 Sobic004G004500 Sobic004G004500 Sobic002G339000--Sobic004G004500 Sobic001G256700 Sobic001G256700 Sobic002G339000--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic002G339000--Sobic007G036900 Sobic003G148300 Sobic003G148300 Sobic002G339000--Sobic003G148300 Sobic001G195200 Sobic001G195200 Sobic002G339000--Sobic001G195200 Sobic002G339000--Sobic004G169200 Sobic004G108200 Sobic004G108200 Sobic002G339000--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic002G339000--Sobic002G395300 Sobic007G214600 Sobic007G214600 Sobic002G339000--Sobic007G214600 Sobic004G191400 Sobic004G191400 Sobic009G122400--Sobic004G191400 Sobic009G122400--Sobic010G209200 Sobic004G191300 Sobic004G191300 Sobic009G122400--Sobic004G191300 Sobic009G122400--Sobic003G428700 Sobic009G122400--Sobic003G228900 Sobic001G079300 Sobic001G079300 Sobic009G122400--Sobic001G079300 Sobic001G330400 Sobic001G330400 Sobic009G122400--Sobic001G330400 Sobic009G122400--Sobic001G256700 Sobic002G388900 Sobic002G388900 Sobic009G122400--Sobic002G388900 Sobic004G169200--Sobic002G395300 Sobic002G358300 Sobic002G358300 Sobic004G169200--Sobic002G358300 Sobic004G169200--Sobic003G428700 Sobic006G263600 Sobic006G263600 Sobic004G169200--Sobic006G263600 Sobic004G169200--Sobic004G191400 Sobic004G169200--Sobic009G122400 Sobic004G169200--Sobic010G209200 Sobic002G220000 Sobic002G220000 Sobic004G169200--Sobic002G220000 Sobic004G169200--Sobic002G339000 Sobic001G471200--Sobic004G341800 Sobic001G471200--Sobic001G035100 Sobic004G228500 Sobic004G228500 Sobic001G471200--Sobic004G228500 Sobic001G471200--Sobic003G228900 Sobic006G103000 Sobic006G103000 Sobic001G471200--Sobic006G103000 Sobic004G219800 Sobic004G219800 Sobic001G471200--Sobic004G219800 Sobic006G183400 Sobic006G183400 Sobic001G471200--Sobic006G183400 Sobic001G471200--Sobic010G223600 Sobic004G243100 Sobic004G243100 Sobic001G471200--Sobic004G243100 Sobic009G224100--Sobic004G243100 Sobic002G139400 Sobic002G139400 Sobic009G224100--Sobic002G139400 Sobic002G184200 Sobic002G184200 Sobic009G224100--Sobic002G184200 Sobic008G187001 Sobic008G187001 Sobic009G224100--Sobic008G187001 Sobic007G155200 Sobic007G155200 Sobic009G224100--Sobic007G155200 Sobic001G423800 Sobic001G423800 Sobic009G224100--Sobic001G423800 Sobic009G224100--Sobic002G388900 Sobic001G192200 Sobic001G192200 Sobic009G224100--Sobic001G192200 Sobic001G330100 Sobic001G330100 Sobic009G224100--Sobic001G330100 Sobic001G035100--Sobic002G220000 Sobic003G093000 Sobic003G093000 Sobic001G035100--Sobic003G093000 Sobic001G035100--Sobic003G428700 Sobic001G035100--Sobic004G219800 Sobic001G035100--Sobic004G169200 Sobic004G097100 Sobic004G097100 Sobic001G035100--Sobic004G097100 Sobic004G222500 Sobic004G222500 Sobic001G035100--Sobic004G222500 Sobic009G241801 Sobic009G241801 Sobic001G035100--Sobic009G241801 Sobic001G035100--Sobic001G471200
Octagon: transcription factors


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