Gene annotation
Transcriptome id Sobic.006G267200.1
Synonym Sb06g032940
Functional annotation pyruvate kinase, putative, expressed
UniProt C5YAI8
Pfam PF02887 PF00224
Panther DB PTHR11817 PTHR11817:SF5
NCBI CDD -
KEGG Orthology K00873; PK, pyruvate kinase
Gene Ontology GO:0006096; glycolytic process GO:0004743pyruvate kinase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G08570 : Pyruvate kinase family protein
RAP-DB (Rice) LOC_Os04g58110.1 : pyruvate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a057383 , Zm00025a024134 , Zm00025a009293
Brachypodium KQK21884 , KQJ85283 , KQK03897
Barley HORVU3Hr1G039230.2 , HORVU3Hr1G039230.1 , HORVU2Hr1G119460.2 , HORVU2Hr1G119460.1 , HORVU2Hr1G040570.1 , HORVU2Hr1G040570.2 , HORVU2Hr1G040570.3 , HORVU0Hr1G005720.2 , HORVU0Hr1G005720.3
Wheat TraesCS3D02G192800 , TraesCS2B02G591300 , TraesCS3A02G189300 , TraesCS2A02G593000 , TraesCS2D02G561700 , TraesCS3B02G218500 , TraesCS3B02G218500
Populus PNT18696 , PNT18697 , PNT18694 , PNT18693 , PNT18698 , PNT18699 , PNT18695 , PNT21873 , PNT21874 , PNT21875


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cDNA sequences
Sobic.006G267200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
2 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
3 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
4 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
5 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
6 Sobic.010G086200 GRAM domain containing protein, expressed -
7 Sobic.004G146000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
8 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
9 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
11 Sobic.001G108200 expressed protein -
12 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
13 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
16 Sobic.003G369100 AP2 domain containing protein, expressed -
17 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
18 Sobic.003G288600 reticulon domain containing protein, putative, expressed -
19 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
20 Sobic.003G387000 expressed protein -


Gene co-expression network
sample Sobic006G267200 Sobic006G267200 Sobic001G459800 Sobic001G459800 Sobic006G267200--Sobic001G459800 Sobic004G065500 Sobic004G065500 Sobic006G267200--Sobic004G065500 Sobic003G393900 Sobic003G393900 Sobic006G267200--Sobic003G393900 Sobic001G405500 Sobic001G405500 Sobic006G267200--Sobic001G405500 Sobic009G141800 Sobic009G141800 Sobic006G267200--Sobic009G141800 Sobic010G086200 Sobic010G086200 Sobic006G267200--Sobic010G086200 Sobic004G146000 Sobic004G146000 Sobic006G267200--Sobic004G146000 Sobic004G141200 Sobic004G141200 Sobic006G267200--Sobic004G141200 Sobic001G320900 Sobic001G320900 Sobic006G267200--Sobic001G320900 Sobic001G391500 Sobic001G391500 Sobic001G459800--Sobic001G391500 Sobic001G459800--Sobic006G267200 Sobic001G459800--Sobic004G141200 Sobic001G459800--Sobic003G393900 Sobic003G228900 Sobic003G228900 Sobic001G459800--Sobic003G228900 Sobic001G459800--Sobic004G065500 Sobic001G138600 Sobic001G138600 Sobic001G459800--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G459800--Sobic007G074000 Sobic005G011300 Sobic005G011300 Sobic001G459800--Sobic005G011300 Sobic004G065500--Sobic006G267200 Sobic004G065500--Sobic001G459800 Sobic004G065500--Sobic003G393900 Sobic004G065500--Sobic007G074000 Sobic004G065500--Sobic010G086200 Sobic004G306300 Sobic004G306300 Sobic004G065500--Sobic004G306300 Sobic004G065500--Sobic003G228900 Sobic004G321300 Sobic004G321300 Sobic004G065500--Sobic004G321300 Sobic009G247900 Sobic009G247900 Sobic004G065500--Sobic009G247900 Sobic003G393900--Sobic004G141200 Sobic001G108200 Sobic001G108200 Sobic003G393900--Sobic001G108200 Sobic003G393900--Sobic001G459800 Sobic004G100700 Sobic004G100700 Sobic003G393900--Sobic004G100700 Sobic002G188900 Sobic002G188900 Sobic003G393900--Sobic002G188900 Sobic003G393900--Sobic004G065500 Sobic003G393900--Sobic006G267200 Sobic003G393900--Sobic005G011300 Sobic003G369100 Sobic003G369100 Sobic003G393900--Sobic003G369100 Sobic003G086600 Sobic003G086600 Sobic001G405500--Sobic003G086600 Sobic003G148600 Sobic003G148600 Sobic001G405500--Sobic003G148600 Sobic003G394400 Sobic003G394400 Sobic001G405500--Sobic003G394400 Sobic001G405500--Sobic001G108200 Sobic007G026600 Sobic007G026600 Sobic001G405500--Sobic007G026600 Sobic003G144700 Sobic003G144700 Sobic001G405500--Sobic003G144700 Sobic003G355100 Sobic003G355100 Sobic001G405500--Sobic003G355100 Sobic003G382800 Sobic003G382800 Sobic001G405500--Sobic003G382800 Sobic001G405500--Sobic006G267200 Sobic009G141800--Sobic006G267200 Sobic009G141800--Sobic010G086200 Sobic009G141800--Sobic003G393900 Sobic009G141800--Sobic004G065500 Sobic004G187900 Sobic004G187900 Sobic009G141800--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic009G141800--Sobic001G281400 Sobic009G008900 Sobic009G008900 Sobic009G141800--Sobic009G008900 Sobic003G387000 Sobic003G387000 Sobic009G141800--Sobic003G387000 Sobic009G141800--Sobic001G459800 Sobic010G086200--Sobic006G267200 Sobic010G086200--Sobic004G065500 Sobic010G086200--Sobic004G321300 Sobic010G086200--Sobic009G141800 Sobic009G129000 Sobic009G129000 Sobic010G086200--Sobic009G129000 Sobic009G143400 Sobic009G143400 Sobic010G086200--Sobic009G143400 Sobic010G086200--Sobic001G459800 Sobic009G033700 Sobic009G033700 Sobic010G086200--Sobic009G033700 Sobic010G086200--Sobic003G393900 Sobic004G146000--Sobic003G393900 Sobic004G146000--Sobic006G267200 Sobic004G146000--Sobic001G459800 Sobic004G146000--Sobic001G108200 Sobic004G146000--Sobic001G405500 Sobic004G146000--Sobic004G141200 Sobic004G146000--Sobic004G065500 Sobic004G146000--Sobic003G355100 Sobic004G146000--Sobic003G148600 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic004G141200--Sobic001G459800 Sobic004G304625 Sobic004G304625 Sobic004G141200--Sobic004G304625 Sobic004G141200--Sobic001G138600 Sobic004G141200--Sobic001G391500 Sobic004G141200--Sobic004G100700 Sobic009G036000 Sobic009G036000 Sobic001G320900--Sobic009G036000 Sobic001G320900--Sobic003G144700 Sobic009G169000 Sobic009G169000 Sobic001G320900--Sobic009G169000 Sobic001G320900--Sobic001G391500 Sobic001G320900--Sobic003G148600 Sobic009G036100 Sobic009G036100 Sobic001G320900--Sobic009G036100 Sobic003G197200 Sobic003G197200 Sobic001G320900--Sobic003G197200 Sobic001G320900--Sobic003G355100 Sobic001G320900--Sobic001G405500
Octagon: transcription factors


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