Gene annotation
Transcriptome id Sobic.006G231200.1
Synonym Sb06g029890
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
wound induced protein, putative, expressed
UniProt C5YGQ5
Pfam PF12609
Panther DB PTHR33090
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10270 : Wound-responsive family protein
RAP-DB (Rice) LOC_Os04g54240.1 : wound induced protein, putative, expressed
MaizeGDB (Corn) Zm00025a018162 , Zm00025a009631 , Zm00025a009630
Brachypodium KQK17212 , KQJ84834 , KQJ84833 , KQJ93436 , KQJ84831 , KQJ84830
Barley HORVU2Hr1G108780.1 , HORVU7Hr1G101580.2 , HORVU2Hr1G116830.1 , HORVU2Hr1G108730.1 , HORVU6Hr1G025830.1 , HORVU2Hr1G116800.1 , HORVU2Hr1G116800.2 , HORVU2Hr1G116800.3 , HORVU2Hr1G116800.4 , HORVU2Hr1G116780.1 , HORVU7Hr1G101580.1
Wheat TraesCS7B02G348300 , TraesCS7A02G449200 , TraesCS7B02G348900 , TraesCS2D02G532000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
2 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
3 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
4 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
5 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
7 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
8 Sobic.002G282300 expressed protein -
9 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
12 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
13 Sobic.003G369100 AP2 domain containing protein, expressed -
14 Sobic.001G138600 VQ domain containing protein, putative, expressed -
15 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
16 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
18 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
20 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic006G231200 Sobic006G231200 Sobic006G230900 Sobic006G230900 Sobic006G231200--Sobic006G230900 Sobic006G231100 Sobic006G231100 Sobic006G231200--Sobic006G231100 Sobic007G213800 Sobic007G213800 Sobic006G231200--Sobic007G213800 Sobic001G459800 Sobic001G459800 Sobic006G231200--Sobic001G459800 Sobic010G217800 Sobic010G217800 Sobic006G231200--Sobic010G217800 Sobic003G144700 Sobic003G144700 Sobic006G231200--Sobic003G144700 Sobic006G267200 Sobic006G267200 Sobic006G231200--Sobic006G267200 Sobic002G282300 Sobic002G282300 Sobic006G231200--Sobic002G282300 Sobic001G320900 Sobic001G320900 Sobic006G231200--Sobic001G320900 Sobic006G230900--Sobic006G231200 Sobic006G230900--Sobic006G231100 Sobic006G230900--Sobic002G282300 Sobic006G230900--Sobic007G213800 Sobic006G230900--Sobic010G217800 Sobic002G415600 Sobic002G415600 Sobic006G230900--Sobic002G415600 Sobic006G230900--Sobic003G144700 Sobic003G123600 Sobic003G123600 Sobic006G230900--Sobic003G123600 Sobic003G197200 Sobic003G197200 Sobic006G230900--Sobic003G197200 Sobic008G177800 Sobic008G177800 Sobic006G231100--Sobic008G177800 Sobic006G231100--Sobic006G230900 Sobic006G231100--Sobic006G231200 Sobic006G231100--Sobic010G217800 Sobic006G231100--Sobic002G415600 Sobic010G234600 Sobic010G234600 Sobic006G231100--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic006G231100--Sobic004G286600 Sobic002G294700 Sobic002G294700 Sobic006G231100--Sobic002G294700 Sobic006G231100--Sobic002G282300 Sobic007G213800--Sobic003G144700 Sobic001G391500 Sobic001G391500 Sobic007G213800--Sobic001G391500 Sobic007G213800--Sobic002G282300 Sobic007G213800--Sobic006G230900 Sobic007G213800--Sobic003G197200 Sobic001G138600 Sobic001G138600 Sobic007G213800--Sobic001G138600 Sobic007G213800--Sobic006G231200 Sobic010G209200 Sobic010G209200 Sobic007G213800--Sobic010G209200 Sobic007G213800--Sobic001G459800 Sobic001G459800--Sobic001G391500 Sobic001G459800--Sobic006G267200 Sobic004G141200 Sobic004G141200 Sobic001G459800--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic001G459800--Sobic003G393900 Sobic003G228900 Sobic003G228900 Sobic001G459800--Sobic003G228900 Sobic004G065500 Sobic004G065500 Sobic001G459800--Sobic004G065500 Sobic001G459800--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G459800--Sobic007G074000 Sobic005G011300 Sobic005G011300 Sobic001G459800--Sobic005G011300 Sobic010G217800--Sobic002G415600 Sobic010G217800--Sobic006G230900 Sobic010G217800--Sobic003G144700 Sobic010G217800--Sobic003G123600 Sobic010G217800--Sobic006G231200 Sobic010G217800--Sobic006G231100 Sobic010G217800--Sobic006G267200 Sobic010G220200 Sobic010G220200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800 Sobic003G144700--Sobic003G197200 Sobic003G148600 Sobic003G148600 Sobic003G144700--Sobic003G148600 Sobic003G144700--Sobic007G213800 Sobic003G144700--Sobic001G320900 Sobic003G355100 Sobic003G355100 Sobic003G144700--Sobic003G355100 Sobic003G144700--Sobic001G391500 Sobic009G169000 Sobic009G169000 Sobic003G144700--Sobic009G169000 Sobic003G144700--Sobic003G123600 Sobic003G144700--Sobic006G230900 Sobic006G267200--Sobic001G459800 Sobic006G267200--Sobic004G065500 Sobic006G267200--Sobic003G393900 Sobic001G405500 Sobic001G405500 Sobic006G267200--Sobic001G405500 Sobic009G141800 Sobic009G141800 Sobic006G267200--Sobic009G141800 Sobic010G086200 Sobic010G086200 Sobic006G267200--Sobic010G086200 Sobic004G146000 Sobic004G146000 Sobic006G267200--Sobic004G146000 Sobic006G267200--Sobic004G141200 Sobic006G267200--Sobic001G320900 Sobic002G282300--Sobic006G230900 Sobic002G282300--Sobic007G213800 Sobic001G205350 Sobic001G205350 Sobic002G282300--Sobic001G205350 Sobic001G338600 Sobic001G338600 Sobic002G282300--Sobic001G338600 Sobic002G282300--Sobic003G144700 Sobic002G282300--Sobic003G197200 Sobic002G282300--Sobic006G231200 Sobic002G282300--Sobic001G320900 Sobic004G169200 Sobic004G169200 Sobic002G282300--Sobic004G169200 Sobic009G036000 Sobic009G036000 Sobic001G320900--Sobic009G036000 Sobic001G320900--Sobic003G144700 Sobic001G320900--Sobic009G169000 Sobic001G320900--Sobic001G391500 Sobic001G320900--Sobic003G148600 Sobic009G036100 Sobic009G036100 Sobic001G320900--Sobic009G036100 Sobic001G320900--Sobic003G197200 Sobic001G320900--Sobic003G355100 Sobic001G320900--Sobic001G405500
Octagon: transcription factors


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