Gene annotation
Transcriptome id Sobic.004G146000.1
Synonym Sb04g019020
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
fructose-bisphospate aldolase isozyme, putative, expressed
UniProt C5XRQ7
Pfam PF00274
Panther DB PTHR11627:SF21 PTHR11627
NCBI CDD -
KEGG Orthology K01623; fructose-bisphosphate aldolase, class I
Gene Ontology GO:0004332; fructose-bisphosphate aldolase activity GO:0006096glycolytic process


Orthologs (automatic annotation)
TAIR AT2G36460 : Aldolase superfamily protein
RAP-DB (Rice) LOC_Os05g33380.1 : fructose-bisphospate aldolase isozyme, putative, expressed
MaizeGDB (Corn) Zm00025a039403 , Zm00025a026369
Brachypodium KQK11092
Barley HORVU3Hr1G088540.1 , HORVU3Hr1G088540.2 , HORVU3Hr1G088500.2 , HORVU3Hr1G088500.3 , HORVU3Hr1G088570.1 , HORVU3Hr1G088570.2
Wheat TraesCS3A02G391100 , TraesCS3A02G391500 , TraesCS3B02G423200 , TraesCS3D02G384000 , TraesCS3B02G422900 , TraesCS3D02G384100 , TraesCS3D02G384100 , TraesCS3D02G383700
Populus PNT32068 , PNT32065 , PNT32067 , PNT32066


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cDNA sequences
Sobic.004G146000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
2 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
3 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
4 Sobic.001G108200 expressed protein -
5 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
6 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
7 Sobic.004G065500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
8 Sobic.003G355100 expressed protein -
9 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
10 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
11 Sobic.007G214600 EF hand family protein, putative, expressed -
12 Sobic.003G377100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
13 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
15 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
16 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.004G306300 expressed protein -
18 Sobic.010G086200 GRAM domain containing protein, expressed -
19 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.009G189501 - -


Gene co-expression network
sample Sobic004G146000 Sobic004G146000 Sobic003G393900 Sobic003G393900 Sobic004G146000--Sobic003G393900 Sobic006G267200 Sobic006G267200 Sobic004G146000--Sobic006G267200 Sobic001G459800 Sobic001G459800 Sobic004G146000--Sobic001G459800 Sobic001G108200 Sobic001G108200 Sobic004G146000--Sobic001G108200 Sobic001G405500 Sobic001G405500 Sobic004G146000--Sobic001G405500 Sobic004G141200 Sobic004G141200 Sobic004G146000--Sobic004G141200 Sobic004G065500 Sobic004G065500 Sobic004G146000--Sobic004G065500 Sobic003G355100 Sobic003G355100 Sobic004G146000--Sobic003G355100 Sobic003G148600 Sobic003G148600 Sobic004G146000--Sobic003G148600 Sobic003G393900--Sobic004G141200 Sobic003G393900--Sobic001G108200 Sobic003G393900--Sobic001G459800 Sobic004G100700 Sobic004G100700 Sobic003G393900--Sobic004G100700 Sobic002G188900 Sobic002G188900 Sobic003G393900--Sobic002G188900 Sobic003G393900--Sobic004G065500 Sobic003G393900--Sobic006G267200 Sobic005G011300 Sobic005G011300 Sobic003G393900--Sobic005G011300 Sobic003G369100 Sobic003G369100 Sobic003G393900--Sobic003G369100 Sobic006G267200--Sobic001G459800 Sobic006G267200--Sobic004G065500 Sobic006G267200--Sobic003G393900 Sobic006G267200--Sobic001G405500 Sobic009G141800 Sobic009G141800 Sobic006G267200--Sobic009G141800 Sobic010G086200 Sobic010G086200 Sobic006G267200--Sobic010G086200 Sobic006G267200--Sobic004G146000 Sobic006G267200--Sobic004G141200 Sobic001G320900 Sobic001G320900 Sobic006G267200--Sobic001G320900 Sobic001G391500 Sobic001G391500 Sobic001G459800--Sobic001G391500 Sobic001G459800--Sobic006G267200 Sobic001G459800--Sobic004G141200 Sobic001G459800--Sobic003G393900 Sobic003G228900 Sobic003G228900 Sobic001G459800--Sobic003G228900 Sobic001G459800--Sobic004G065500 Sobic001G138600 Sobic001G138600 Sobic001G459800--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G459800--Sobic007G074000 Sobic001G459800--Sobic005G011300 Sobic001G108200--Sobic004G141200 Sobic001G108200--Sobic003G393900 Sobic001G108200--Sobic004G100700 Sobic001G108200--Sobic003G369100 Sobic003G086600 Sobic003G086600 Sobic001G108200--Sobic003G086600 Sobic001G108200--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic001G108200--Sobic007G214600 Sobic003G382800 Sobic003G382800 Sobic001G108200--Sobic003G382800 Sobic005G099000 Sobic005G099000 Sobic001G108200--Sobic005G099000 Sobic001G405500--Sobic003G086600 Sobic001G405500--Sobic003G148600 Sobic003G394400 Sobic003G394400 Sobic001G405500--Sobic003G394400 Sobic001G405500--Sobic001G108200 Sobic007G026600 Sobic007G026600 Sobic001G405500--Sobic007G026600 Sobic003G144700 Sobic003G144700 Sobic001G405500--Sobic003G144700 Sobic001G405500--Sobic003G355100 Sobic001G405500--Sobic003G382800 Sobic001G405500--Sobic006G267200 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic004G141200--Sobic001G459800 Sobic004G304625 Sobic004G304625 Sobic004G141200--Sobic004G304625 Sobic004G141200--Sobic001G138600 Sobic004G141200--Sobic001G391500 Sobic004G141200--Sobic004G100700 Sobic004G065500--Sobic006G267200 Sobic004G065500--Sobic001G459800 Sobic004G065500--Sobic003G393900 Sobic004G065500--Sobic007G074000 Sobic004G065500--Sobic010G086200 Sobic004G306300 Sobic004G306300 Sobic004G065500--Sobic004G306300 Sobic004G065500--Sobic003G228900 Sobic004G321300 Sobic004G321300 Sobic004G065500--Sobic004G321300 Sobic009G247900 Sobic009G247900 Sobic004G065500--Sobic009G247900 Sobic003G355100--Sobic007G214600 Sobic003G197200 Sobic003G197200 Sobic003G355100--Sobic003G197200 Sobic001G481300 Sobic001G481300 Sobic003G355100--Sobic001G481300 Sobic003G355100--Sobic003G148600 Sobic004G109600 Sobic004G109600 Sobic003G355100--Sobic004G109600 Sobic003G355100--Sobic003G394400 Sobic003G355100--Sobic001G108200 Sobic003G355100--Sobic003G144700 Sobic004G166200 Sobic004G166200 Sobic003G355100--Sobic004G166200 Sobic003G148600--Sobic003G197200 Sobic003G123600 Sobic003G123600 Sobic003G148600--Sobic003G123600 Sobic003G148600--Sobic003G144700 Sobic003G148600--Sobic003G355100 Sobic003G148600--Sobic007G214600 Sobic003G148600--Sobic004G166200 Sobic001G107800 Sobic001G107800 Sobic003G148600--Sobic001G107800 Sobic003G148600--Sobic001G405500 Sobic003G148600--Sobic003G394400
Octagon: transcription factors


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