Gene annotation
Transcriptome id Sobic.009G189501.1
Synonym -
Functional annotation -
UniProt C5XCC5 , A0A1Z5R3C0 , A0A1W0VZW7
Pfam -
Panther DB PTHR34114 PTHR34114:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13520 : arabinogalactan protein 12
RAP-DB (Rice) LOC_Os01g57030.1 : expressed protein
MaizeGDB (Corn) Zm00025a044151
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
2 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
4 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
5 Sobic.007G214600 EF hand family protein, putative, expressed -
6 Sobic.001G397300 Up-reguralion under heat(PubMedID : 24916767)@expressed protein -
7 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
8 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
9 Sobic.003G355100 expressed protein -
10 Sobic.001G190100 serine/threonine-protein kinase receptor precursor, putative, expressed -
11 Sobic.001G108200 expressed protein -
12 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
14 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
15 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
16 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
18 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
19 Sobic.001G195200 cytochrome P450, putative, expressed -
20 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -


Gene co-expression network
sample Sobic009G189501 Sobic009G189501 Sobic004G004500 Sobic004G004500 Sobic009G189501--Sobic004G004500 Sobic001G391500 Sobic001G391500 Sobic009G189501--Sobic001G391500 Sobic001G459800 Sobic001G459800 Sobic009G189501--Sobic001G459800 Sobic002G339000 Sobic002G339000 Sobic009G189501--Sobic002G339000 Sobic007G214600 Sobic007G214600 Sobic009G189501--Sobic007G214600 Sobic001G397300 Sobic001G397300 Sobic009G189501--Sobic001G397300 Sobic007G036900 Sobic007G036900 Sobic009G189501--Sobic007G036900 Sobic004G141200 Sobic004G141200 Sobic009G189501--Sobic004G141200 Sobic003G355100 Sobic003G355100 Sobic009G189501--Sobic003G355100 Sobic004G004500--Sobic002G339000 Sobic001G256700 Sobic001G256700 Sobic004G004500--Sobic001G256700 Sobic004G004500--Sobic007G036900 Sobic003G148300 Sobic003G148300 Sobic004G004500--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic004G004500--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic004G004500--Sobic001G195200 Sobic004G004500--Sobic009G189501 Sobic004G294400 Sobic004G294400 Sobic004G004500--Sobic004G294400 Sobic004G229800 Sobic004G229800 Sobic004G004500--Sobic004G229800 Sobic001G391500--Sobic001G459800 Sobic001G391500--Sobic004G141200 Sobic003G144700 Sobic003G144700 Sobic001G391500--Sobic003G144700 Sobic007G213800 Sobic007G213800 Sobic001G391500--Sobic007G213800 Sobic001G320900 Sobic001G320900 Sobic001G391500--Sobic001G320900 Sobic003G148600 Sobic003G148600 Sobic001G391500--Sobic003G148600 Sobic003G369100 Sobic003G369100 Sobic001G391500--Sobic003G369100 Sobic001G138600 Sobic001G138600 Sobic001G391500--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G391500--Sobic007G074000 Sobic001G459800--Sobic001G391500 Sobic006G267200 Sobic006G267200 Sobic001G459800--Sobic006G267200 Sobic001G459800--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic001G459800--Sobic003G393900 Sobic003G228900 Sobic003G228900 Sobic001G459800--Sobic003G228900 Sobic004G065500 Sobic004G065500 Sobic001G459800--Sobic004G065500 Sobic001G459800--Sobic001G138600 Sobic001G459800--Sobic007G074000 Sobic005G011300 Sobic005G011300 Sobic001G459800--Sobic005G011300 Sobic002G339000--Sobic004G004500 Sobic002G339000--Sobic001G256700 Sobic002G339000--Sobic007G036900 Sobic002G339000--Sobic003G148300 Sobic002G339000--Sobic001G195200 Sobic004G169200 Sobic004G169200 Sobic002G339000--Sobic004G169200 Sobic002G339000--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic002G339000--Sobic002G395300 Sobic002G339000--Sobic007G214600 Sobic007G214600--Sobic003G355100 Sobic003G197200 Sobic003G197200 Sobic007G214600--Sobic003G197200 Sobic004G109600 Sobic004G109600 Sobic007G214600--Sobic004G109600 Sobic007G214600--Sobic003G148600 Sobic001G481300 Sobic001G481300 Sobic007G214600--Sobic001G481300 Sobic010G198500 Sobic010G198500 Sobic007G214600--Sobic010G198500 Sobic001G371800 Sobic001G371800 Sobic007G214600--Sobic001G371800 Sobic003G394400 Sobic003G394400 Sobic007G214600--Sobic003G394400 Sobic004G166200 Sobic004G166200 Sobic007G214600--Sobic004G166200 Sobic002G250000 Sobic002G250000 Sobic001G397300--Sobic002G250000 Sobic001G397300--Sobic009G189501 Sobic007G006300 Sobic007G006300 Sobic001G397300--Sobic007G006300 Sobic002G234400 Sobic002G234400 Sobic001G397300--Sobic002G234400 Sobic001G190100 Sobic001G190100 Sobic001G397300--Sobic001G190100 Sobic002G407100 Sobic002G407100 Sobic001G397300--Sobic002G407100 Sobic007G178000 Sobic007G178000 Sobic001G397300--Sobic007G178000 Sobic001G397300--Sobic005G011300 Sobic002G327201 Sobic002G327201 Sobic001G397300--Sobic002G327201 Sobic007G036900--Sobic004G004500 Sobic008G187001 Sobic008G187001 Sobic007G036900--Sobic008G187001 Sobic007G036900--Sobic004G229800 Sobic007G036900--Sobic001G256700 Sobic007G036900--Sobic004G141200 Sobic007G036900--Sobic002G339000 Sobic003G364600 Sobic003G364600 Sobic007G036900--Sobic003G364600 Sobic001G108200 Sobic001G108200 Sobic007G036900--Sobic001G108200 Sobic001G079300 Sobic001G079300 Sobic007G036900--Sobic001G079300 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic004G141200--Sobic001G459800 Sobic004G304625 Sobic004G304625 Sobic004G141200--Sobic004G304625 Sobic004G141200--Sobic001G138600 Sobic004G141200--Sobic001G391500 Sobic004G100700 Sobic004G100700 Sobic004G141200--Sobic004G100700 Sobic003G355100--Sobic007G214600 Sobic003G355100--Sobic003G197200 Sobic003G355100--Sobic001G481300 Sobic003G355100--Sobic003G148600 Sobic003G355100--Sobic004G109600 Sobic003G355100--Sobic003G394400 Sobic003G355100--Sobic001G108200 Sobic003G355100--Sobic003G144700 Sobic003G355100--Sobic004G166200
Octagon: transcription factors


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