Gene annotation
Transcriptome id Sobic.001G190100.1
Synonym RK3, Sb01g016720, ARK3
Functional annotation serine/threonine-protein kinase receptor precursor, putative, expressed
UniProt C5WV97
Pfam PF08276 PF01453 PF00954 PF07714
Panther DB PTHR27002 PTHR27002:SF8
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os03g35600.1 : serine/threonine-protein kinase receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a054001 , Zm00025a044078 , Zm00025a006256 , Zm00025a048337 , Zm00025a048280 , Zm00025a020523
Brachypodium KQK15839 , PNT65707 , KQK15913 , KQK14050
Barley HORVU2Hr1G030320.1 , HORVU1Hr1G074310.1 , HORVU1Hr1G074310.2 , HORVU1Hr1G074310.4 , HORVU1Hr1G074310.8 , HORVU1Hr1G074310.9 , HORVU1Hr1G074310.3 , HORVU1Hr1G074310.5 , HORVU1Hr1G074310.6 , HORVU1Hr1G074310.7 , HORVU2Hr1G042550.1 , HORVU2Hr1G042550.2 , HORVU2Hr1G042550.3 , HORVU1Hr1G088580.6 , HORVU1Hr1G088580.7 , HORVU1Hr1G088580.4 , HORVU1Hr1G088580.5 , HORVU1Hr1G088580.2 , HORVU1Hr1G088580.3 , HORVU1Hr1G088580.1 , HORVU5Hr1G087040.2 , HORVU5Hr1G087040.3 , HORVU5Hr1G087040.1 , HORVU5Hr1G087040.6 , HORVU5Hr1G087040.7 , HORVU5Hr1G087040.4 , HORVU5Hr1G087040.5 , HORVU2Hr1G044890.7 , HORVU2Hr1G044890.6 , HORVU2Hr1G044890.5 , HORVU2Hr1G044890.4 , HORVU2Hr1G044890.3 , HORVU2Hr1G044890.2 , HORVU2Hr1G044890.1 , HORVU2Hr1G044890.9 , HORVU2Hr1G044890.8 , HORVU1Hr1G074310.10 , HORVU1Hr1G074310.11 , HORVU1Hr1G074310.16 , HORVU1Hr1G074310.14 , HORVU1Hr1G074310.15 , HORVU1Hr1G088580.15 , HORVU1Hr1G088580.10 , HORVU1Hr1G088580.11 , HORVU1Hr1G088580.12 , HORVU1Hr1G088580.13 , HORVU1Hr1G088580.8 , HORVU1Hr1G088580.9 , HORVU5Hr1G111240.4 , HORVU5Hr1G111240.5 , HORVU5Hr1G111240.6 , HORVU5Hr1G111240.7 , HORVU5Hr1G111240.2 , HORVU5Hr1G111240.3 , HORVU5Hr1G111240.8 , HORVU5Hr1G111240.9 , HORVU2Hr1G044890.14 , HORVU2Hr1G044890.13 , HORVU2Hr1G044890.12 , HORVU2Hr1G044890.11 , HORVU2Hr1G044890.10
Wheat TraesCS1A02G273600 , TraesCS2D02G217600 , TraesCS2A02G211900 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273600 , TraesCS1D02G273800 , TraesCS1D02G273800 , TraesCS5D02G357000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G189501 - -
2 Sobic.007G006300 expressed protein -
3 Sobic.001G397300 Up-reguralion under heat(PubMedID : 24916767)@expressed protein -
4 Sobic.001G105900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
5 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
6 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
8 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
10 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
11 Sobic.001G195200 cytochrome P450, putative, expressed -
12 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
13 Sobic.007G147700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
14 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
15 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.010G198500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
18 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
19 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
20 Sobic.002G282300 expressed protein -


Gene co-expression network
sample Sobic001G190100 Sobic001G190100 Sobic009G189501 Sobic009G189501 Sobic001G190100--Sobic009G189501 Sobic007G006300 Sobic007G006300 Sobic001G190100--Sobic007G006300 Sobic001G397300 Sobic001G397300 Sobic001G190100--Sobic001G397300 Sobic001G105900 Sobic001G105900 Sobic001G190100--Sobic001G105900 Sobic002G234400 Sobic002G234400 Sobic001G190100--Sobic002G234400 Sobic001G391500 Sobic001G391500 Sobic001G190100--Sobic001G391500 Sobic002G250000 Sobic002G250000 Sobic001G190100--Sobic002G250000 Sobic003G260300 Sobic003G260300 Sobic001G190100--Sobic003G260300 Sobic002G339000 Sobic002G339000 Sobic001G190100--Sobic002G339000 Sobic004G004500 Sobic004G004500 Sobic009G189501--Sobic004G004500 Sobic009G189501--Sobic001G391500 Sobic001G459800 Sobic001G459800 Sobic009G189501--Sobic001G459800 Sobic009G189501--Sobic002G339000 Sobic007G214600 Sobic007G214600 Sobic009G189501--Sobic007G214600 Sobic009G189501--Sobic001G397300 Sobic007G036900 Sobic007G036900 Sobic009G189501--Sobic007G036900 Sobic004G141200 Sobic004G141200 Sobic009G189501--Sobic004G141200 Sobic003G355100 Sobic003G355100 Sobic009G189501--Sobic003G355100 Sobic010G198500 Sobic010G198500 Sobic007G006300--Sobic010G198500 Sobic007G147700 Sobic007G147700 Sobic007G006300--Sobic007G147700 Sobic004G086400 Sobic004G086400 Sobic007G006300--Sobic004G086400 Sobic001G195200 Sobic001G195200 Sobic007G006300--Sobic001G195200 Sobic007G006300--Sobic002G234400 Sobic007G006300--Sobic001G190100 Sobic007G006300--Sobic001G397300 Sobic003G148300 Sobic003G148300 Sobic007G006300--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic007G006300--Sobic004G108200 Sobic001G397300--Sobic002G250000 Sobic001G397300--Sobic009G189501 Sobic001G397300--Sobic007G006300 Sobic001G397300--Sobic002G234400 Sobic001G397300--Sobic001G190100 Sobic002G407100 Sobic002G407100 Sobic001G397300--Sobic002G407100 Sobic007G178000 Sobic007G178000 Sobic001G397300--Sobic007G178000 Sobic005G011300 Sobic005G011300 Sobic001G397300--Sobic005G011300 Sobic002G327201 Sobic002G327201 Sobic001G397300--Sobic002G327201 Sobic001G105900--Sobic007G147700 Sobic001G443800 Sobic001G443800 Sobic001G105900--Sobic001G443800 Sobic003G197200 Sobic003G197200 Sobic001G105900--Sobic003G197200 Sobic002G291900 Sobic002G291900 Sobic001G105900--Sobic002G291900 Sobic001G105900--Sobic001G190100 Sobic001G201200 Sobic001G201200 Sobic001G105900--Sobic001G201200 Sobic001G105900--Sobic010G198500 Sobic003G148600 Sobic003G148600 Sobic001G105900--Sobic003G148600 Sobic009G148100 Sobic009G148100 Sobic001G105900--Sobic009G148100 Sobic009G183900 Sobic009G183900 Sobic002G234400--Sobic009G183900 Sobic002G234400--Sobic004G108200 Sobic002G234400--Sobic002G250000 Sobic004G229400 Sobic004G229400 Sobic002G234400--Sobic004G229400 Sobic002G234400--Sobic003G148300 Sobic002G234400--Sobic001G195200 Sobic001G487500 Sobic001G487500 Sobic002G234400--Sobic001G487500 Sobic006G198700 Sobic006G198700 Sobic002G234400--Sobic006G198700 Sobic002G234400--Sobic004G086400 Sobic001G391500--Sobic001G459800 Sobic001G391500--Sobic004G141200 Sobic003G144700 Sobic003G144700 Sobic001G391500--Sobic003G144700 Sobic007G213800 Sobic007G213800 Sobic001G391500--Sobic007G213800 Sobic001G320900 Sobic001G320900 Sobic001G391500--Sobic001G320900 Sobic001G391500--Sobic003G148600 Sobic003G369100 Sobic003G369100 Sobic001G391500--Sobic003G369100 Sobic001G138600 Sobic001G138600 Sobic001G391500--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G391500--Sobic007G074000 Sobic002G250000--Sobic002G234400 Sobic002G250000--Sobic001G397300 Sobic010G029700 Sobic010G029700 Sobic002G250000--Sobic010G029700 Sobic008G186100 Sobic008G186100 Sobic002G250000--Sobic008G186100 Sobic002G250000--Sobic005G011300 Sobic002G250000--Sobic007G006300 Sobic002G250000--Sobic004G108200 Sobic002G287100 Sobic002G287100 Sobic002G250000--Sobic002G287100 Sobic003G033900 Sobic003G033900 Sobic002G250000--Sobic003G033900 Sobic003G228900 Sobic003G228900 Sobic003G260300--Sobic003G228900 Sobic001G079300 Sobic001G079300 Sobic003G260300--Sobic001G079300 Sobic004G191400 Sobic004G191400 Sobic003G260300--Sobic004G191400 Sobic006G075400 Sobic006G075400 Sobic003G260300--Sobic006G075400 Sobic003G432700 Sobic003G432700 Sobic003G260300--Sobic003G432700 Sobic001G502400 Sobic001G502400 Sobic003G260300--Sobic001G502400 Sobic009G184000 Sobic009G184000 Sobic003G260300--Sobic009G184000 Sobic004G191300 Sobic004G191300 Sobic003G260300--Sobic004G191300 Sobic003G260300--Sobic001G195200 Sobic002G339000--Sobic004G004500 Sobic001G256700 Sobic001G256700 Sobic002G339000--Sobic001G256700 Sobic002G339000--Sobic007G036900 Sobic002G339000--Sobic003G148300 Sobic002G339000--Sobic001G195200 Sobic004G169200 Sobic004G169200 Sobic002G339000--Sobic004G169200 Sobic002G339000--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic002G339000--Sobic002G395300 Sobic002G339000--Sobic007G214600
Octagon: transcription factors


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