Gene annotation
Transcriptome id Sobic.007G006300.1
Synonym Sb07g000720
Functional annotation expressed protein
UniProt A0A1B6PER9
Pfam -
Panther DB PTHR33115 PTHR33115:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18980 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os07g45460.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G198500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.007G147700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
3 Sobic.004G086400 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
4 Sobic.001G195200 cytochrome P450, putative, expressed -
5 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
6 Sobic.001G190100 serine/threonine-protein kinase receptor precursor, putative, expressed -
7 Sobic.001G397300 Up-reguralion under heat(PubMedID : 24916767)@expressed protein -
8 Sobic.003G148300 pectinesterase, putative, expressed K01051: pectinesterase
9 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
10 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
11 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.007G214600 EF hand family protein, putative, expressed -
13 Sobic.004G004500 lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
14 Sobic.002G284000 pyridoxal-dependent decarboxylase protein, putative, expressed K01581: E4.1.1.17, ODC1, speC, ornithine decarboxylase
15 Sobic.004G294400 expansin precursor, putative, expressed -
16 Sobic.009G189501 - -
17 Sobic.001G487500 expressed protein -
18 Sobic.001G201200 - -
19 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.007G178000 heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic007G006300 Sobic007G006300 Sobic010G198500 Sobic010G198500 Sobic007G006300--Sobic010G198500 Sobic007G147700 Sobic007G147700 Sobic007G006300--Sobic007G147700 Sobic004G086400 Sobic004G086400 Sobic007G006300--Sobic004G086400 Sobic001G195200 Sobic001G195200 Sobic007G006300--Sobic001G195200 Sobic002G234400 Sobic002G234400 Sobic007G006300--Sobic002G234400 Sobic001G190100 Sobic001G190100 Sobic007G006300--Sobic001G190100 Sobic001G397300 Sobic001G397300 Sobic007G006300--Sobic001G397300 Sobic003G148300 Sobic003G148300 Sobic007G006300--Sobic003G148300 Sobic004G108200 Sobic004G108200 Sobic007G006300--Sobic004G108200 Sobic007G214600 Sobic007G214600 Sobic010G198500--Sobic007G214600 Sobic001G201200 Sobic001G201200 Sobic010G198500--Sobic001G201200 Sobic003G197200 Sobic003G197200 Sobic010G198500--Sobic003G197200 Sobic010G198500--Sobic007G147700 Sobic001G443800 Sobic001G443800 Sobic010G198500--Sobic001G443800 Sobic004G109600 Sobic004G109600 Sobic010G198500--Sobic004G109600 Sobic001G371800 Sobic001G371800 Sobic010G198500--Sobic001G371800 Sobic003G355100 Sobic003G355100 Sobic010G198500--Sobic003G355100 Sobic001G481300 Sobic001G481300 Sobic010G198500--Sobic001G481300 Sobic007G147700--Sobic010G198500 Sobic007G147700--Sobic003G197200 Sobic007G147700--Sobic001G201200 Sobic007G147700--Sobic001G443800 Sobic007G147700--Sobic007G214600 Sobic001G105900 Sobic001G105900 Sobic007G147700--Sobic001G105900 Sobic007G147700--Sobic001G481300 Sobic007G147700--Sobic003G355100 Sobic001G279350 Sobic001G279350 Sobic007G147700--Sobic001G279350 Sobic004G086400--Sobic003G148300 Sobic004G086400--Sobic004G108200 Sobic004G004500 Sobic004G004500 Sobic004G086400--Sobic004G004500 Sobic010G212800 Sobic010G212800 Sobic004G086400--Sobic010G212800 Sobic006G207000 Sobic006G207000 Sobic004G086400--Sobic006G207000 Sobic004G086400--Sobic007G006300 Sobic004G086400--Sobic002G234400 Sobic002G339000 Sobic002G339000 Sobic004G086400--Sobic002G339000 Sobic009G189501 Sobic009G189501 Sobic004G086400--Sobic009G189501 Sobic004G294400 Sobic004G294400 Sobic001G195200--Sobic004G294400 Sobic001G256700 Sobic001G256700 Sobic001G195200--Sobic001G256700 Sobic004G308900 Sobic004G308900 Sobic001G195200--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic001G195200--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic001G195200--Sobic007G122800 Sobic001G195200--Sobic004G004500 Sobic001G195200--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic001G195200--Sobic002G395300 Sobic004G191300 Sobic004G191300 Sobic001G195200--Sobic004G191300 Sobic009G183900 Sobic009G183900 Sobic002G234400--Sobic009G183900 Sobic002G234400--Sobic004G108200 Sobic002G250000 Sobic002G250000 Sobic002G234400--Sobic002G250000 Sobic004G229400 Sobic004G229400 Sobic002G234400--Sobic004G229400 Sobic002G234400--Sobic003G148300 Sobic002G234400--Sobic001G195200 Sobic001G487500 Sobic001G487500 Sobic002G234400--Sobic001G487500 Sobic006G198700 Sobic006G198700 Sobic002G234400--Sobic006G198700 Sobic002G234400--Sobic004G086400 Sobic001G190100--Sobic009G189501 Sobic001G190100--Sobic007G006300 Sobic001G190100--Sobic001G397300 Sobic001G190100--Sobic001G105900 Sobic001G190100--Sobic002G234400 Sobic001G391500 Sobic001G391500 Sobic001G190100--Sobic001G391500 Sobic001G190100--Sobic002G250000 Sobic003G260300 Sobic003G260300 Sobic001G190100--Sobic003G260300 Sobic001G190100--Sobic002G339000 Sobic001G397300--Sobic002G250000 Sobic001G397300--Sobic009G189501 Sobic001G397300--Sobic007G006300 Sobic001G397300--Sobic002G234400 Sobic001G397300--Sobic001G190100 Sobic002G407100 Sobic002G407100 Sobic001G397300--Sobic002G407100 Sobic007G178000 Sobic007G178000 Sobic001G397300--Sobic007G178000 Sobic005G011300 Sobic005G011300 Sobic001G397300--Sobic005G011300 Sobic002G327201 Sobic002G327201 Sobic001G397300--Sobic002G327201 Sobic003G148300--Sobic004G108200 Sobic003G148300--Sobic004G004500 Sobic003G148300--Sobic004G086400 Sobic009G144700 Sobic009G144700 Sobic003G148300--Sobic009G144700 Sobic003G148300--Sobic004G294400 Sobic003G148300--Sobic001G256700 Sobic001G330100 Sobic001G330100 Sobic003G148300--Sobic001G330100 Sobic003G148300--Sobic002G339000 Sobic003G148300--Sobic010G212800 Sobic004G108200--Sobic003G148300 Sobic004G108200--Sobic009G144700 Sobic004G108200--Sobic004G294400 Sobic004G108200--Sobic001G256700 Sobic004G108200--Sobic001G330100 Sobic004G108200--Sobic004G004500 Sobic004G108200--Sobic002G395300 Sobic004G108200--Sobic001G195200 Sobic004G108200--Sobic002G234400
Octagon: transcription factors


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