Gene annotation
Transcriptome id Sobic.007G178000.1
Synonym Sb07g024945
Functional annotation heat shock protein DnaJ, putative, expressed
UniProt A0A1B6PIL8
Pfam PF00226
Panther DB PTHR24078
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17880 : Chaperone DnaJ-domain superfamily protein
RAP-DB (Rice) LOC_Os08g43490.1 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a034210 , Zm00025a005699
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G377100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
2 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
3 Sobic.007G147700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR33 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.003G355100 expressed protein -
5 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.001G397300 Up-reguralion under heat(PubMedID : 24916767)@expressed protein -
7 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
8 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
9 Sobic.002G407100 expressed protein -
10 Sobic.007G006300 expressed protein -
11 Sobic.007G214600 EF hand family protein, putative, expressed -
12 Sobic.010G198500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G105900 "Significantly enhanced the expression levels by drought stress, decreased markedly by silicon application"(PubMedID : 24813726)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
14 Sobic.001G076100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.008G118700 respiratory burst oxidase, putative, expressed -
16 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G371800 expressed protein -
19 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic007G178000 Sobic007G178000 Sobic003G377100 Sobic003G377100 Sobic007G178000--Sobic003G377100 Sobic003G197200 Sobic003G197200 Sobic007G178000--Sobic003G197200 Sobic007G147700 Sobic007G147700 Sobic007G178000--Sobic007G147700 Sobic003G355100 Sobic003G355100 Sobic007G178000--Sobic003G355100 Sobic001G481300 Sobic001G481300 Sobic007G178000--Sobic001G481300 Sobic001G397300 Sobic001G397300 Sobic007G178000--Sobic001G397300 Sobic003G148600 Sobic003G148600 Sobic007G178000--Sobic003G148600 Sobic003G144700 Sobic003G144700 Sobic007G178000--Sobic003G144700 Sobic002G407100 Sobic002G407100 Sobic007G178000--Sobic002G407100 Sobic003G377100--Sobic003G148600 Sobic002G068600 Sobic002G068600 Sobic003G377100--Sobic002G068600 Sobic003G086600 Sobic003G086600 Sobic003G377100--Sobic003G086600 Sobic001G405500 Sobic001G405500 Sobic003G377100--Sobic001G405500 Sobic008G118700 Sobic008G118700 Sobic003G377100--Sobic008G118700 Sobic004G166200 Sobic004G166200 Sobic003G377100--Sobic004G166200 Sobic003G377100--Sobic003G355100 Sobic001G108200 Sobic001G108200 Sobic003G377100--Sobic001G108200 Sobic003G377100--Sobic003G197200 Sobic003G197200--Sobic003G148600 Sobic007G214600 Sobic007G214600 Sobic003G197200--Sobic007G214600 Sobic003G197200--Sobic003G355100 Sobic003G197200--Sobic003G144700 Sobic001G443800 Sobic001G443800 Sobic003G197200--Sobic001G443800 Sobic003G197200--Sobic001G481300 Sobic001G201200 Sobic001G201200 Sobic003G197200--Sobic001G201200 Sobic004G109600 Sobic004G109600 Sobic003G197200--Sobic004G109600 Sobic003G123600 Sobic003G123600 Sobic003G197200--Sobic003G123600 Sobic010G198500 Sobic010G198500 Sobic007G147700--Sobic010G198500 Sobic007G147700--Sobic003G197200 Sobic007G147700--Sobic001G201200 Sobic007G147700--Sobic001G443800 Sobic007G147700--Sobic007G214600 Sobic001G105900 Sobic001G105900 Sobic007G147700--Sobic001G105900 Sobic007G147700--Sobic001G481300 Sobic007G147700--Sobic003G355100 Sobic001G279350 Sobic001G279350 Sobic007G147700--Sobic001G279350 Sobic003G355100--Sobic007G214600 Sobic003G355100--Sobic003G197200 Sobic003G355100--Sobic001G481300 Sobic003G355100--Sobic003G148600 Sobic003G355100--Sobic004G109600 Sobic003G394400 Sobic003G394400 Sobic003G355100--Sobic003G394400 Sobic003G355100--Sobic001G108200 Sobic003G355100--Sobic003G144700 Sobic003G355100--Sobic004G166200 Sobic001G481300--Sobic003G355100 Sobic001G481300--Sobic004G109600 Sobic001G481300--Sobic003G197200 Sobic001G481300--Sobic007G214600 Sobic001G481300--Sobic001G279350 Sobic004G109700 Sobic004G109700 Sobic001G481300--Sobic004G109700 Sobic001G481300--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic001G481300--Sobic001G371800 Sobic001G481300--Sobic010G198500 Sobic002G250000 Sobic002G250000 Sobic001G397300--Sobic002G250000 Sobic009G189501 Sobic009G189501 Sobic001G397300--Sobic009G189501 Sobic007G006300 Sobic007G006300 Sobic001G397300--Sobic007G006300 Sobic002G234400 Sobic002G234400 Sobic001G397300--Sobic002G234400 Sobic001G190100 Sobic001G190100 Sobic001G397300--Sobic001G190100 Sobic001G397300--Sobic002G407100 Sobic001G397300--Sobic007G178000 Sobic005G011300 Sobic005G011300 Sobic001G397300--Sobic005G011300 Sobic002G327201 Sobic002G327201 Sobic001G397300--Sobic002G327201 Sobic003G148600--Sobic003G197200 Sobic003G148600--Sobic003G123600 Sobic003G148600--Sobic003G144700 Sobic003G148600--Sobic003G355100 Sobic003G148600--Sobic007G214600 Sobic003G148600--Sobic004G166200 Sobic001G107800 Sobic001G107800 Sobic003G148600--Sobic001G107800 Sobic003G148600--Sobic001G405500 Sobic003G148600--Sobic003G394400 Sobic003G144700--Sobic003G197200 Sobic003G144700--Sobic003G148600 Sobic007G213800 Sobic007G213800 Sobic003G144700--Sobic007G213800 Sobic001G320900 Sobic001G320900 Sobic003G144700--Sobic001G320900 Sobic003G144700--Sobic003G355100 Sobic001G391500 Sobic001G391500 Sobic003G144700--Sobic001G391500 Sobic009G169000 Sobic009G169000 Sobic003G144700--Sobic009G169000 Sobic003G144700--Sobic003G123600 Sobic006G230900 Sobic006G230900 Sobic003G144700--Sobic006G230900 Sobic002G407100--Sobic001G397300 Sobic002G407100--Sobic007G178000 Sobic009G121900 Sobic009G121900 Sobic002G407100--Sobic009G121900 Sobic002G327300 Sobic002G327300 Sobic002G407100--Sobic002G327300 Sobic002G407100--Sobic002G250000 Sobic001G432700 Sobic001G432700 Sobic002G407100--Sobic001G432700 Sobic002G407100--Sobic007G006300 Sobic002G407100--Sobic002G327201 Sobic009G074100 Sobic009G074100 Sobic002G407100--Sobic009G074100
Octagon: transcription factors


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