Gene annotation
Transcriptome id Sobic.003G093000.1
Synonym Sb03g007780
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A1B6Q2A0
Pfam -
Panther DB PTHR33782 PTHR33782:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01300 : -
RAP-DB (Rice) LOC_Os01g03130.1 : expressed protein
MaizeGDB (Corn) Zm00025a023670
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G220000 expressed protein -
2 Sobic.003G092900 expressed protein -
3 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
4 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
5 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.004G191400 - -
7 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
8 Sobic.009G122400 expressed protein -
9 Sobic.010G259300 transferase family protein, putative, expressed -
10 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
11 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
12 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
14 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
15 Sobic.003G268600 - -
16 Sobic.002G358300 expressed protein -
17 Sobic.010G209200 WRKY28, expressed -
18 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
19 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
20 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C


Gene co-expression network
sample Sobic003G093000 Sobic003G093000 Sobic002G220000 Sobic002G220000 Sobic003G093000--Sobic002G220000 Sobic003G092900 Sobic003G092900 Sobic003G093000--Sobic003G092900 Sobic002G189100 Sobic002G189100 Sobic003G093000--Sobic002G189100 Sobic004G222500 Sobic004G222500 Sobic003G093000--Sobic004G222500 Sobic003G428700 Sobic003G428700 Sobic003G093000--Sobic003G428700 Sobic004G191400 Sobic004G191400 Sobic003G093000--Sobic004G191400 Sobic003G228900 Sobic003G228900 Sobic003G093000--Sobic003G228900 Sobic009G122400 Sobic009G122400 Sobic003G093000--Sobic009G122400 Sobic010G259300 Sobic010G259300 Sobic003G093000--Sobic010G259300 Sobic002G220000--Sobic003G093000 Sobic001G035100 Sobic001G035100 Sobic002G220000--Sobic001G035100 Sobic001G330400 Sobic001G330400 Sobic002G220000--Sobic001G330400 Sobic002G220000--Sobic003G428700 Sobic002G220000--Sobic003G092900 Sobic002G220000--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic002G220000--Sobic004G169200 Sobic002G220000--Sobic002G189100 Sobic004G219800 Sobic004G219800 Sobic002G220000--Sobic004G219800 Sobic003G092900--Sobic003G093000 Sobic003G092900--Sobic004G222500 Sobic003G092900--Sobic002G220000 Sobic001G247300 Sobic001G247300 Sobic003G092900--Sobic001G247300 Sobic002G140300 Sobic002G140300 Sobic003G092900--Sobic002G140300 Sobic003G430400 Sobic003G430400 Sobic003G092900--Sobic003G430400 Sobic009G247900 Sobic009G247900 Sobic003G092900--Sobic009G247900 Sobic001G267600 Sobic001G267600 Sobic003G092900--Sobic001G267600 Sobic003G092900--Sobic002G189100 Sobic002G189100--Sobic003G228900 Sobic002G189100--Sobic003G093000 Sobic009G192600 Sobic009G192600 Sobic002G189100--Sobic009G192600 Sobic009G184000 Sobic009G184000 Sobic002G189100--Sobic009G184000 Sobic003G142300 Sobic003G142300 Sobic002G189100--Sobic003G142300 Sobic010G209200 Sobic010G209200 Sobic002G189100--Sobic010G209200 Sobic002G189100--Sobic002G220000 Sobic002G189100--Sobic004G191400 Sobic002G189100--Sobic001G267600 Sobic004G222500--Sobic002G140300 Sobic004G222500--Sobic003G093000 Sobic004G222500--Sobic003G092900 Sobic004G222500--Sobic003G428700 Sobic006G183400 Sobic006G183400 Sobic004G222500--Sobic006G183400 Sobic004G222500--Sobic009G247900 Sobic004G222500--Sobic001G035100 Sobic004G222500--Sobic002G220000 Sobic006G179500 Sobic006G179500 Sobic004G222500--Sobic006G179500 Sobic003G428700--Sobic009G122400 Sobic003G428700--Sobic010G209200 Sobic003G428700--Sobic004G191400 Sobic003G428700--Sobic004G169200 Sobic003G428700--Sobic003G093000 Sobic003G428700--Sobic004G222500 Sobic003G428700--Sobic009G247900 Sobic003G428700--Sobic002G220000 Sobic003G428700--Sobic001G035100 Sobic004G191300 Sobic004G191300 Sobic004G191400--Sobic004G191300 Sobic001G079300 Sobic001G079300 Sobic004G191400--Sobic001G079300 Sobic004G191400--Sobic009G122400 Sobic004G191400--Sobic010G209200 Sobic007G122800 Sobic007G122800 Sobic004G191400--Sobic007G122800 Sobic004G191400--Sobic003G228900 Sobic004G308900 Sobic004G308900 Sobic004G191400--Sobic004G308900 Sobic004G191400--Sobic003G428700 Sobic004G294400 Sobic004G294400 Sobic004G191400--Sobic004G294400 Sobic006G075400 Sobic006G075400 Sobic003G228900--Sobic006G075400 Sobic003G228900--Sobic010G209200 Sobic003G228900--Sobic009G184000 Sobic003G228900--Sobic004G191400 Sobic003G432700 Sobic003G432700 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic003G228900--Sobic009G122400 Sobic003G228900--Sobic001G079300 Sobic009G122400--Sobic004G191400 Sobic009G122400--Sobic010G209200 Sobic009G122400--Sobic004G191300 Sobic009G122400--Sobic003G428700 Sobic009G122400--Sobic003G228900 Sobic009G122400--Sobic001G079300 Sobic009G122400--Sobic001G330400 Sobic001G256700 Sobic001G256700 Sobic009G122400--Sobic001G256700 Sobic002G388900 Sobic002G388900 Sobic009G122400--Sobic002G388900 Sobic010G259300--Sobic003G093000 Sobic010G259300--Sobic002G189100 Sobic001G407800 Sobic001G407800 Sobic010G259300--Sobic001G407800 Sobic006G054800 Sobic006G054800 Sobic010G259300--Sobic006G054800 Sobic008G139600 Sobic008G139600 Sobic010G259300--Sobic008G139600 Sobic010G259300--Sobic002G220000 Sobic004G237800 Sobic004G237800 Sobic010G259300--Sobic004G237800 Sobic010G259300--Sobic001G247300 Sobic003G043500 Sobic003G043500 Sobic010G259300--Sobic003G043500
Octagon: transcription factors


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