Gene annotation
Transcriptome id Sobic.010G209200.1
Synonym ATWRKY40, WRKY40, Sb10g025600
Functional annotation WRKY28, expressed
UniProt C5Z6T5
Pfam PF03106
Panther DB PTHR31429 PTHR31429:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G80840 : WRKY DNA-binding protein 40
RAP-DB (Rice) LOC_Os06g44010.1 : WRKY28, expressed
MaizeGDB (Corn) Zm00025a051603 , Zm00025a047001 , Zm00025a042053 , Zm00025a034743
Brachypodium KQK19880 , KQJ93670 , KQK16829
Barley HORVU5Hr1G065420.8 , HORVU5Hr1G065420.9 , HORVU5Hr1G065420.1 , HORVU5Hr1G065420.2 , HORVU5Hr1G065420.3 , HORVU5Hr1G065420.6 , HORVU6Hr1G028790.2 , HORVU6Hr1G028790.3 , HORVU6Hr1G028790.1 , HORVU7Hr1G113850.4 , HORVU7Hr1G113850.1 , HORVU7Hr1G113850.3 , HORVU7Hr1G113850.2 , HORVU3Hr1G020210.2 , HORVU3Hr1G020210.3 , HORVU3Hr1G020210.1 , HORVU3Hr1G020210.4 , HORVU7Hr1G113830.3 , HORVU7Hr1G113830.2 , HORVU7Hr1G113830.1 , HORVU7Hr1G113830.4 , HORVU5Hr1G065420.12 , HORVU5Hr1G065420.10 , HORVU5Hr1G065420.11
Wheat TraesCS6A02G146900 , TraesCS6B02G175100 , TraesCS6B02G175100 , TraesCS7D02G497700 , TraesCS7B02G419400 , TraesCS5B02G224000 , TraesCS7A02G509000 , TraesCS7A02G508700 , TraesCS1B02G434300 , TraesCS7B02G418600 , TraesCS5D02G232800 , TraesCS6D02G136200 , TraesCS6D02G136200 , TraesCS3B02G130000 , TraesCS3B02G130000 , TraesCS7D02G497400 , TraesCS7D02G497400 , TraesCS7B02G418500 , TraesCS7B02G418500 , TraesCS1D02G412500 , TraesCS7B02G418400 , TraesCS7D02G497300 , TraesCS7D02G497300 , TraesCS5B02G224100 , TraesCS7A02G508800 , TraesCS3D02G113300 , TraesCSU02G001200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G122400 expressed protein -
2 Sobic.004G191400 - -
3 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
5 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.004G191300 - -
7 Sobic.001G138600 VQ domain containing protein, putative, expressed -
8 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
9 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
10 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
11 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
13 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
14 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
15 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
17 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.005G186100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@patatin, putative, expressed -
19 Sobic.006G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
20 Sobic.003G064200 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic010G209200 Sobic010G209200 Sobic009G122400 Sobic009G122400 Sobic010G209200--Sobic009G122400 Sobic004G191400 Sobic004G191400 Sobic010G209200--Sobic004G191400 Sobic003G428700 Sobic003G428700 Sobic010G209200--Sobic003G428700 Sobic003G228900 Sobic003G228900 Sobic010G209200--Sobic003G228900 Sobic001G079300 Sobic001G079300 Sobic010G209200--Sobic001G079300 Sobic004G191300 Sobic004G191300 Sobic010G209200--Sobic004G191300 Sobic001G138600 Sobic001G138600 Sobic010G209200--Sobic001G138600 Sobic007G213800 Sobic007G213800 Sobic010G209200--Sobic007G213800 Sobic009G184000 Sobic009G184000 Sobic010G209200--Sobic009G184000 Sobic009G122400--Sobic004G191400 Sobic009G122400--Sobic010G209200 Sobic009G122400--Sobic004G191300 Sobic009G122400--Sobic003G428700 Sobic009G122400--Sobic003G228900 Sobic009G122400--Sobic001G079300 Sobic001G330400 Sobic001G330400 Sobic009G122400--Sobic001G330400 Sobic001G256700 Sobic001G256700 Sobic009G122400--Sobic001G256700 Sobic002G388900 Sobic002G388900 Sobic009G122400--Sobic002G388900 Sobic004G191400--Sobic004G191300 Sobic004G191400--Sobic001G079300 Sobic004G191400--Sobic009G122400 Sobic004G191400--Sobic010G209200 Sobic007G122800 Sobic007G122800 Sobic004G191400--Sobic007G122800 Sobic004G191400--Sobic003G228900 Sobic004G308900 Sobic004G308900 Sobic004G191400--Sobic004G308900 Sobic004G191400--Sobic003G428700 Sobic004G294400 Sobic004G294400 Sobic004G191400--Sobic004G294400 Sobic003G428700--Sobic009G122400 Sobic003G428700--Sobic010G209200 Sobic003G428700--Sobic004G191400 Sobic004G169200 Sobic004G169200 Sobic003G428700--Sobic004G169200 Sobic003G093000 Sobic003G093000 Sobic003G428700--Sobic003G093000 Sobic004G222500 Sobic004G222500 Sobic003G428700--Sobic004G222500 Sobic009G247900 Sobic009G247900 Sobic003G428700--Sobic009G247900 Sobic002G220000 Sobic002G220000 Sobic003G428700--Sobic002G220000 Sobic001G035100 Sobic001G035100 Sobic003G428700--Sobic001G035100 Sobic006G075400 Sobic006G075400 Sobic003G228900--Sobic006G075400 Sobic003G228900--Sobic010G209200 Sobic003G228900--Sobic009G184000 Sobic003G228900--Sobic004G191400 Sobic003G432700 Sobic003G432700 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic003G228900--Sobic009G122400 Sobic003G228900--Sobic001G079300 Sobic001G079300--Sobic004G191400 Sobic001G079300--Sobic004G191300 Sobic001G079300--Sobic010G209200 Sobic001G079300--Sobic003G228900 Sobic001G079300--Sobic001G138600 Sobic001G079300--Sobic009G122400 Sobic001G079300--Sobic003G260300 Sobic004G141200 Sobic004G141200 Sobic001G079300--Sobic004G141200 Sobic001G079300--Sobic009G184000 Sobic004G191300--Sobic004G191400 Sobic004G191300--Sobic009G122400 Sobic004G191300--Sobic001G079300 Sobic004G191300--Sobic010G209200 Sobic004G191300--Sobic007G122800 Sobic004G191300--Sobic004G294400 Sobic004G191300--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic004G191300--Sobic002G358300 Sobic001G195200 Sobic001G195200 Sobic004G191300--Sobic001G195200 Sobic003G382800 Sobic003G382800 Sobic001G138600--Sobic003G382800 Sobic001G112200 Sobic001G112200 Sobic001G138600--Sobic001G112200 Sobic001G138600--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic001G138600--Sobic003G369100 Sobic001G138600--Sobic009G184000 Sobic001G138600--Sobic001G079300 Sobic007G074000 Sobic007G074000 Sobic001G138600--Sobic007G074000 Sobic001G459800 Sobic001G459800 Sobic001G138600--Sobic001G459800 Sobic001G391500 Sobic001G391500 Sobic001G138600--Sobic001G391500 Sobic003G144700 Sobic003G144700 Sobic007G213800--Sobic003G144700 Sobic007G213800--Sobic001G391500 Sobic002G282300 Sobic002G282300 Sobic007G213800--Sobic002G282300 Sobic006G230900 Sobic006G230900 Sobic007G213800--Sobic006G230900 Sobic003G197200 Sobic003G197200 Sobic007G213800--Sobic003G197200 Sobic007G213800--Sobic001G138600 Sobic006G231200 Sobic006G231200 Sobic007G213800--Sobic006G231200 Sobic007G213800--Sobic010G209200 Sobic007G213800--Sobic001G459800 Sobic009G184000--Sobic001G112200 Sobic007G169700 Sobic007G169700 Sobic009G184000--Sobic007G169700 Sobic006G235100 Sobic006G235100 Sobic009G184000--Sobic006G235100 Sobic001G502400 Sobic001G502400 Sobic009G184000--Sobic001G502400 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic009G184000--Sobic001G138600 Sobic008G066401 Sobic008G066401 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100
Octagon: transcription factors


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