Gene annotation
Transcriptome id Sobic.006G056400.1
Synonym JAZ10, TIFY9, JAS1, Sb06g014460
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
zinc-finger protein, putative, expressed
UniProt A0A1B6PKE6
Pfam PF09425 PF06200
Panther DB PTHR33077 PTHR33077:SF2
NCBI CDD -
KEGG Orthology K13464; jasmonate ZIM domain-containing protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13220 : jasmonate-zim-domain protein 10
RAP-DB (Rice) LOC_Os04g32480.1 : zinc-finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a011691
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
2 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
3 Sobic.008G136400 expressed protein -
4 Sobic.003G369100 AP2 domain containing protein, expressed -
5 Sobic.005G186100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@patatin, putative, expressed -
6 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
8 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.001G308300 expressed protein -
10 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
11 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
12 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
14 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
15 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
16 Sobic.010G209200 WRKY28, expressed -
17 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
18 Sobic.001G481100 DUF581 domain containing protein, expressed -
19 Sobic.001G138600 VQ domain containing protein, putative, expressed -
20 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -


Gene co-expression network
sample Sobic006G056400 Sobic006G056400 Sobic002G333400 Sobic002G333400 Sobic006G056400--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic006G056400--Sobic006G158600 Sobic008G136400 Sobic008G136400 Sobic006G056400--Sobic008G136400 Sobic003G369100 Sobic003G369100 Sobic006G056400--Sobic003G369100 Sobic005G186100 Sobic005G186100 Sobic006G056400--Sobic005G186100 Sobic002G140400 Sobic002G140400 Sobic006G056400--Sobic002G140400 Sobic007G074000 Sobic007G074000 Sobic006G056400--Sobic007G074000 Sobic001G318700 Sobic001G318700 Sobic006G056400--Sobic001G318700 Sobic001G308300 Sobic001G308300 Sobic006G056400--Sobic001G308300 Sobic001G407800 Sobic001G407800 Sobic002G333400--Sobic001G407800 Sobic002G333400--Sobic006G158600 Sobic002G333400--Sobic006G056400 Sobic002G333400--Sobic008G136400 Sobic002G333400--Sobic005G186100 Sobic002G333400--Sobic003G369100 Sobic009G151600 Sobic009G151600 Sobic002G333400--Sobic009G151600 Sobic002G333400--Sobic002G140400 Sobic002G333400--Sobic007G074000 Sobic006G158600--Sobic008G136400 Sobic002G192000 Sobic002G192000 Sobic006G158600--Sobic002G192000 Sobic006G158600--Sobic002G140400 Sobic006G158600--Sobic002G333400 Sobic006G158600--Sobic006G056400 Sobic001G038900 Sobic001G038900 Sobic006G158600--Sobic001G038900 Sobic001G423800 Sobic001G423800 Sobic006G158600--Sobic001G423800 Sobic002G336600 Sobic002G336600 Sobic006G158600--Sobic002G336600 Sobic004G243100 Sobic004G243100 Sobic006G158600--Sobic004G243100 Sobic008G136400--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic008G136400--Sobic008G050600 Sobic008G136400--Sobic002G140400 Sobic006G275200 Sobic006G275200 Sobic008G136400--Sobic006G275200 Sobic001G140900 Sobic001G140900 Sobic008G136400--Sobic001G140900 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic008G136400--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic008G136400--Sobic009G008900 Sobic004G141200 Sobic004G141200 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic001G138600 Sobic001G138600 Sobic003G369100--Sobic001G138600 Sobic001G108200 Sobic001G108200 Sobic003G369100--Sobic001G108200 Sobic003G369100--Sobic001G140900 Sobic001G112200 Sobic001G112200 Sobic003G369100--Sobic001G112200 Sobic003G345100 Sobic003G345100 Sobic003G369100--Sobic003G345100 Sobic003G369100--Sobic008G050600 Sobic003G369100--Sobic001G308300 Sobic005G186100--Sobic001G138600 Sobic005G186100--Sobic001G112200 Sobic005G186100--Sobic006G056400 Sobic005G186100--Sobic002G333400 Sobic005G186100--Sobic001G318700 Sobic003G228900 Sobic003G228900 Sobic005G186100--Sobic003G228900 Sobic001G481100 Sobic001G481100 Sobic005G186100--Sobic001G481100 Sobic001G079300 Sobic001G079300 Sobic005G186100--Sobic001G079300 Sobic009G184000 Sobic009G184000 Sobic005G186100--Sobic009G184000 Sobic002G140400--Sobic001G038900 Sobic002G263400 Sobic002G263400 Sobic002G140400--Sobic002G263400 Sobic002G140400--Sobic004G189400 Sobic002G140400--Sobic001G423800 Sobic002G140400--Sobic008G136400 Sobic002G140400--Sobic007G074000 Sobic004G237800 Sobic004G237800 Sobic002G140400--Sobic004G237800 Sobic002G140400--Sobic008G050600 Sobic003G286600 Sobic003G286600 Sobic002G140400--Sobic003G286600 Sobic007G074000--Sobic003G369100 Sobic007G074000--Sobic004G141200 Sobic007G074000--Sobic004G237800 Sobic007G074000--Sobic002G140400 Sobic007G074000--Sobic003G228900 Sobic007G074000--Sobic002G336600 Sobic003G364600 Sobic003G364600 Sobic007G074000--Sobic003G364600 Sobic007G074000--Sobic001G138600 Sobic009G247900 Sobic009G247900 Sobic007G074000--Sobic009G247900 Sobic001G318700--Sobic001G112200 Sobic001G018300 Sobic001G018300 Sobic001G318700--Sobic001G018300 Sobic001G318700--Sobic004G243100 Sobic001G318700--Sobic002G192000 Sobic003G303100 Sobic003G303100 Sobic001G318700--Sobic003G303100 Sobic002G251000 Sobic002G251000 Sobic001G318700--Sobic002G251000 Sobic001G318700--Sobic001G140900 Sobic006G075400 Sobic006G075400 Sobic001G318700--Sobic006G075400 Sobic001G318700--Sobic001G481100 Sobic001G308300--Sobic002G140400 Sobic001G308300--Sobic003G369100 Sobic001G308300--Sobic004G141200 Sobic001G308300--Sobic001G108200 Sobic001G308300--Sobic007G074000 Sobic001G387900 Sobic001G387900 Sobic001G308300--Sobic001G387900 Sobic001G308300--Sobic001G038900 Sobic001G308300--Sobic003G364600 Sobic001G308300--Sobic006G158600
Octagon: transcription factors


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