Gene annotation
Transcriptome id Sobic.003G050300.1
Synonym Sb03g004380
Functional annotation peroxidases (PubMedID : 28944535)
peroxidase precursor, putative, expressed
UniProt C5XNE7
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF51
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT2G41480 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os01g07770.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK02931 , PNT70049
Barley HORVU0Hr1G006290.1 , HORVU0Hr1G006290.2 , HORVU3Hr1G036780.2 , HORVU3Hr1G024510.1 , HORVU3Hr1G024510.2
Wheat TraesCS3D02G130800 , TraesCS3A02G129900 , TraesCS3B02G209600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G073380 - -
2 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
3 Sobic.003G268600 - -
4 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
5 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
6 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -
9 Sobic.003G442100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
10 Sobic.004G161751 - -
11 Sobic.002G243000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
12 Sobic.005G086600 O-methyltransferase, putative, expressed -
13 Sobic.004G222500 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
14 Sobic.003G092900 expressed protein -
15 Sobic.003G269000 STE_MEKK_ste11_MAP3K.7 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
16 Sobic.003G307801 - -
17 Sobic.003G064200 MYB family transcription factor, putative, expressed -
18 Sobic.004G064500 class I glutamine amidotransferase, putative, expressed -
19 Sobic.010G259300 transferase family protein, putative, expressed -
20 Sobic.010G082600 EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic003G050300 Sobic003G050300 Sobic003G073380 Sobic003G073380 Sobic003G050300--Sobic003G073380 Sobic001G247300 Sobic001G247300 Sobic003G050300--Sobic001G247300 Sobic003G268600 Sobic003G268600 Sobic003G050300--Sobic003G268600 Sobic003G043600 Sobic003G043600 Sobic003G050300--Sobic003G043600 Sobic001G267600 Sobic001G267600 Sobic003G050300--Sobic001G267600 Sobic003G093000 Sobic003G093000 Sobic003G050300--Sobic003G093000 Sobic009G145500 Sobic009G145500 Sobic003G050300--Sobic009G145500 Sobic006G183400 Sobic006G183400 Sobic003G050300--Sobic006G183400 Sobic003G442100 Sobic003G442100 Sobic003G050300--Sobic003G442100 Sobic003G269000 Sobic003G269000 Sobic003G073380--Sobic003G269000 Sobic005G086600 Sobic005G086600 Sobic003G073380--Sobic005G086600 Sobic004G161751 Sobic004G161751 Sobic003G073380--Sobic004G161751 Sobic003G073380--Sobic009G145500 Sobic003G073380--Sobic003G268600 Sobic003G073380--Sobic003G043600 Sobic001G330400 Sobic001G330400 Sobic003G073380--Sobic001G330400 Sobic003G073380--Sobic003G050300 Sobic003G079200 Sobic003G079200 Sobic003G073380--Sobic003G079200 Sobic005G196800 Sobic005G196800 Sobic001G247300--Sobic005G196800 Sobic001G247300--Sobic003G043600 Sobic003G092900 Sobic003G092900 Sobic001G247300--Sobic003G092900 Sobic004G237800 Sobic004G237800 Sobic001G247300--Sobic004G237800 Sobic009G184000 Sobic009G184000 Sobic001G247300--Sobic009G184000 Sobic001G247300--Sobic006G183400 Sobic002G338500 Sobic002G338500 Sobic001G247300--Sobic002G338500 Sobic007G074000 Sobic007G074000 Sobic001G247300--Sobic007G074000 Sobic003G382600 Sobic003G382600 Sobic001G247300--Sobic003G382600 Sobic003G268600--Sobic003G442100 Sobic003G268600--Sobic001G330400 Sobic003G268600--Sobic003G043600 Sobic006G075400 Sobic006G075400 Sobic003G268600--Sobic006G075400 Sobic003G268600--Sobic005G086600 Sobic007G017500 Sobic007G017500 Sobic003G268600--Sobic007G017500 Sobic008G066401 Sobic008G066401 Sobic003G268600--Sobic008G066401 Sobic003G064200 Sobic003G064200 Sobic003G268600--Sobic003G064200 Sobic003G268600--Sobic009G145500 Sobic003G043600--Sobic002G338500 Sobic003G043600--Sobic009G145500 Sobic003G043600--Sobic003G268600 Sobic003G043600--Sobic006G075400 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic003G043600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic003G043600--Sobic009G145700 Sobic001G318700 Sobic001G318700 Sobic003G043600--Sobic001G318700 Sobic001G267600--Sobic003G093000 Sobic002G189100 Sobic002G189100 Sobic001G267600--Sobic002G189100 Sobic001G267600--Sobic003G064200 Sobic001G267600--Sobic003G268600 Sobic001G267600--Sobic001G247300 Sobic009G192600 Sobic009G192600 Sobic001G267600--Sobic009G192600 Sobic001G267600--Sobic003G092900 Sobic001G267600--Sobic003G050300 Sobic010G259300 Sobic010G259300 Sobic001G267600--Sobic010G259300 Sobic002G220000 Sobic002G220000 Sobic003G093000--Sobic002G220000 Sobic003G093000--Sobic003G092900 Sobic003G093000--Sobic002G189100 Sobic004G222500 Sobic004G222500 Sobic003G093000--Sobic004G222500 Sobic003G428700 Sobic003G428700 Sobic003G093000--Sobic003G428700 Sobic004G191400 Sobic004G191400 Sobic003G093000--Sobic004G191400 Sobic003G228900 Sobic003G228900 Sobic003G093000--Sobic003G228900 Sobic009G122400 Sobic009G122400 Sobic003G093000--Sobic009G122400 Sobic003G093000--Sobic010G259300 Sobic009G145500--Sobic003G043600 Sobic009G145500--Sobic003G073380 Sobic004G148200 Sobic004G148200 Sobic009G145500--Sobic004G148200 Sobic001G231400 Sobic001G231400 Sobic009G145500--Sobic001G231400 Sobic009G145500--Sobic003G268600 Sobic009G145500--Sobic002G338500 Sobic006G235000 Sobic006G235000 Sobic009G145500--Sobic006G235000 Sobic009G145600 Sobic009G145600 Sobic009G145500--Sobic009G145600 Sobic006G268800 Sobic006G268800 Sobic009G145500--Sobic006G268800 Sobic006G179500 Sobic006G179500 Sobic006G183400--Sobic006G179500 Sobic002G140300 Sobic002G140300 Sobic006G183400--Sobic002G140300 Sobic006G183400--Sobic005G196800 Sobic006G183400--Sobic001G247300 Sobic006G183400--Sobic004G222500 Sobic003G037800 Sobic003G037800 Sobic006G183400--Sobic003G037800 Sobic009G247900 Sobic009G247900 Sobic006G183400--Sobic009G247900 Sobic002G359300 Sobic002G359300 Sobic006G183400--Sobic002G359300 Sobic003G264500 Sobic003G264500 Sobic006G183400--Sobic003G264500 Sobic003G442100--Sobic003G268600 Sobic003G442100--Sobic001G310600 Sobic003G442100--Sobic003G043600 Sobic006G235100 Sobic006G235100 Sobic003G442100--Sobic006G235100 Sobic001G259900 Sobic001G259900 Sobic003G442100--Sobic001G259900 Sobic006G007900 Sobic006G007900 Sobic003G442100--Sobic006G007900 Sobic003G442100--Sobic004G191400 Sobic003G442100--Sobic006G075400 Sobic003G442100--Sobic005G086600
Octagon: transcription factors


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