Gene annotation
Transcriptome id Sobic.002G243000.1
Synonym Sb02g028000
Functional annotation aspartic proteinase nepenthesin-2 precursor, putative, expressed
UniProt C5X3T4
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF378
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os09g30414.1 : aspartic proteinase nepenthesin-2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a047405
Brachypodium -
Barley HORVU5Hr1G072370.1 , HORVU7Hr1G094870.5 , HORVU7Hr1G094870.4 , HORVU7Hr1G094870.6 , HORVU7Hr1G094870.1 , HORVU7Hr1G094870.3 , HORVU7Hr1G094870.2
Wheat TraesCS7B02G305000 , TraesCS7D02G399500 , TraesCS5A02G259400 , TraesCS5A02G259400 , TraesCS5D02G267300 , TraesCS7A02G405600 , TraesCS5B02G258200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G240600 - -
2 Sobic.003G050300 peroxidases (PubMedID : 28944535)@peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.004G161751 - -
6 Sobic.003G073380 - -
7 Sobic.001G449100 E2F-related protein, putative, expressed -
8 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
9 Sobic.001G401100 pathogenesis-related Bet v I family protein, putative, expressed -
10 Sobic.006G154500 GEM, putative, expressed -
11 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
12 Sobic.010G082600 EF hand family protein, putative, expressed -
13 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
14 Sobic.010G259300 transferase family protein, putative, expressed -
15 Sobic.010G043900 expressed protein -
16 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
17 Sobic.003G307801 - -
18 Sobic.003G079200 - -
19 Sobic.005G196800 membrane protein, putative, expressed -
20 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic002G243000 Sobic002G243000 Sobic006G240600 Sobic006G240600 Sobic002G243000--Sobic006G240600 Sobic003G050300 Sobic003G050300 Sobic002G243000--Sobic003G050300 Sobic009G145500 Sobic009G145500 Sobic002G243000--Sobic009G145500 Sobic008G027600 Sobic008G027600 Sobic002G243000--Sobic008G027600 Sobic004G161751 Sobic004G161751 Sobic002G243000--Sobic004G161751 Sobic003G073380 Sobic003G073380 Sobic002G243000--Sobic003G073380 Sobic001G449100 Sobic001G449100 Sobic002G243000--Sobic001G449100 Sobic002G369400 Sobic002G369400 Sobic002G243000--Sobic002G369400 Sobic001G401100 Sobic001G401100 Sobic002G243000--Sobic001G401100 Sobic006G240600--Sobic009G145500 Sobic006G240600--Sobic002G243000 Sobic006G240600--Sobic003G073380 Sobic006G240600--Sobic004G161751 Sobic010G259300 Sobic010G259300 Sobic006G240600--Sobic010G259300 Sobic006G240600--Sobic001G401100 Sobic009G145600 Sobic009G145600 Sobic006G240600--Sobic009G145600 Sobic006G154500 Sobic006G154500 Sobic006G240600--Sobic006G154500 Sobic003G043600 Sobic003G043600 Sobic006G240600--Sobic003G043600 Sobic003G050300--Sobic003G073380 Sobic001G247300 Sobic001G247300 Sobic003G050300--Sobic001G247300 Sobic003G268600 Sobic003G268600 Sobic003G050300--Sobic003G268600 Sobic003G050300--Sobic003G043600 Sobic001G267600 Sobic001G267600 Sobic003G050300--Sobic001G267600 Sobic003G093000 Sobic003G093000 Sobic003G050300--Sobic003G093000 Sobic003G050300--Sobic009G145500 Sobic006G183400 Sobic006G183400 Sobic003G050300--Sobic006G183400 Sobic003G442100 Sobic003G442100 Sobic003G050300--Sobic003G442100 Sobic009G145500--Sobic003G043600 Sobic009G145500--Sobic003G073380 Sobic004G148200 Sobic004G148200 Sobic009G145500--Sobic004G148200 Sobic001G231400 Sobic001G231400 Sobic009G145500--Sobic001G231400 Sobic009G145500--Sobic003G268600 Sobic002G338500 Sobic002G338500 Sobic009G145500--Sobic002G338500 Sobic006G235000 Sobic006G235000 Sobic009G145500--Sobic006G235000 Sobic009G145500--Sobic009G145600 Sobic006G268800 Sobic006G268800 Sobic009G145500--Sobic006G268800 Sobic006G158400 Sobic006G158400 Sobic008G027600--Sobic006G158400 Sobic008G027600--Sobic002G369400 Sobic008G158100 Sobic008G158100 Sobic008G027600--Sobic008G158100 Sobic010G043900 Sobic010G043900 Sobic008G027600--Sobic010G043900 Sobic001G318500 Sobic001G318500 Sobic008G027600--Sobic001G318500 Sobic001G114900 Sobic001G114900 Sobic008G027600--Sobic001G114900 Sobic003G007600 Sobic003G007600 Sobic008G027600--Sobic003G007600 Sobic008G027600--Sobic009G145500 Sobic008G027600--Sobic002G243000 Sobic003G079200 Sobic003G079200 Sobic004G161751--Sobic003G079200 Sobic004G161751--Sobic003G073380 Sobic005G086600 Sobic005G086600 Sobic004G161751--Sobic005G086600 Sobic006G008000 Sobic006G008000 Sobic004G161751--Sobic006G008000 Sobic004G161751--Sobic009G145500 Sobic004G161751--Sobic009G145600 Sobic002G063800 Sobic002G063800 Sobic004G161751--Sobic002G063800 Sobic004G161751--Sobic006G235000 Sobic004G161751--Sobic003G043600 Sobic003G269000 Sobic003G269000 Sobic003G073380--Sobic003G269000 Sobic003G073380--Sobic005G086600 Sobic003G073380--Sobic004G161751 Sobic003G073380--Sobic009G145500 Sobic003G073380--Sobic003G268600 Sobic003G073380--Sobic003G043600 Sobic001G330400 Sobic001G330400 Sobic003G073380--Sobic001G330400 Sobic003G073380--Sobic003G050300 Sobic003G073380--Sobic003G079200 Sobic001G449100--Sobic003G079200 Sobic001G449100--Sobic002G243000 Sobic008G158600 Sobic008G158600 Sobic001G449100--Sobic008G158600 Sobic001G449100--Sobic006G240600 Sobic001G449100--Sobic002G369400 Sobic001G242000 Sobic001G242000 Sobic001G449100--Sobic001G242000 Sobic007G215600 Sobic007G215600 Sobic001G449100--Sobic007G215600 Sobic001G449100--Sobic002G063800 Sobic001G449100--Sobic004G161751 Sobic002G369400--Sobic008G027600 Sobic002G369400--Sobic001G242000 Sobic002G369400--Sobic001G114900 Sobic010G062300 Sobic010G062300 Sobic002G369400--Sobic010G062300 Sobic002G012300 Sobic002G012300 Sobic002G369400--Sobic002G012300 Sobic002G369400--Sobic003G079200 Sobic008G022000 Sobic008G022000 Sobic002G369400--Sobic008G022000 Sobic002G369400--Sobic002G063800 Sobic008G158501 Sobic008G158501 Sobic002G369400--Sobic008G158501 Sobic001G401100--Sobic009G145500 Sobic001G401100--Sobic006G154500 Sobic001G401100--Sobic009G145600 Sobic006G121500 Sobic006G121500 Sobic001G401100--Sobic006G121500 Sobic001G401100--Sobic003G043600 Sobic003G303100 Sobic003G303100 Sobic001G401100--Sobic003G303100 Sobic001G401100--Sobic003G073380 Sobic001G401100--Sobic004G148200 Sobic003G426400 Sobic003G426400 Sobic001G401100--Sobic003G426400
Octagon: transcription factors


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