Gene annotation
Transcriptome id Sobic.006G154500.1
Synonym Sb06g023180
Functional annotation GEM, putative, expressed
UniProt C5YCI3
Pfam PF02893
Panther DB PTHR31969 PTHR31969:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08350 : GRAM domain-containing protein / ABA-responsive protein-related
RAP-DB (Rice) LOC_Os04g44510.1 : GEM, putative, expressed
MaizeGDB (Corn) Zm00025a030929 , Zm00025a010593 , Zm00025a056549 , Zm00025a021015
Brachypodium KQK00479
Barley HORVU2Hr1G090730.4 , HORVU2Hr1G090730.3 , HORVU2Hr1G090730.2 , HORVU2Hr1G090730.1 , HORVU2Hr1G090690.1 , HORVU2Hr1G090690.2
Wheat TraesCS2B02G392300 , TraesCS2B02G392100 , TraesCS6B02G263000 , TraesCS6D02G216600 , TraesCS2D02G371400 , TraesCS2A02G375100 , TraesCS2A02G375200 , TraesCS2D02G371600 , TraesCS6A02G234300 , TraesCS2D02G371500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G154400 GEM, putative, expressed -
2 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
4 Sobic.004G161751 - -
5 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
6 Sobic.001G401100 pathogenesis-related Bet v I family protein, putative, expressed -
7 Sobic.010G175800 "similar to Glutathione S-transferase GST 19, expressed in drought and oxidative stress"(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
9 Sobic.004G203700 ubiquitin family protein, putative, expressed -
10 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.003G426400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
14 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.003G073380 - -
16 Sobic.004G148200 Cupin domain containing protein, expressed -
17 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.006G240600 - -
19 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
20 Sobic.002G243000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G154500 Sobic006G154500 Sobic006G154400 Sobic006G154400 Sobic006G154500--Sobic006G154400 Sobic009G145500 Sobic009G145500 Sobic006G154500--Sobic009G145500 Sobic003G303100 Sobic003G303100 Sobic006G154500--Sobic003G303100 Sobic004G161751 Sobic004G161751 Sobic006G154500--Sobic004G161751 Sobic003G043600 Sobic003G043600 Sobic006G154500--Sobic003G043600 Sobic001G401100 Sobic001G401100 Sobic006G154500--Sobic001G401100 Sobic010G175800 Sobic010G175800 Sobic006G154500--Sobic010G175800 Sobic002G338500 Sobic002G338500 Sobic006G154500--Sobic002G338500 Sobic004G203700 Sobic004G203700 Sobic006G154500--Sobic004G203700 Sobic006G154400--Sobic006G154500 Sobic006G154400--Sobic010G175800 Sobic006G154400--Sobic004G161751 Sobic010G062300 Sobic010G062300 Sobic006G154400--Sobic010G062300 Sobic002G369400 Sobic002G369400 Sobic006G154400--Sobic002G369400 Sobic003G079200 Sobic003G079200 Sobic006G154400--Sobic003G079200 Sobic009G145600 Sobic009G145600 Sobic006G154400--Sobic009G145600 Sobic009G145700 Sobic009G145700 Sobic006G154400--Sobic009G145700 Sobic006G008000 Sobic006G008000 Sobic006G154400--Sobic006G008000 Sobic009G145500--Sobic003G043600 Sobic003G073380 Sobic003G073380 Sobic009G145500--Sobic003G073380 Sobic004G148200 Sobic004G148200 Sobic009G145500--Sobic004G148200 Sobic001G231400 Sobic001G231400 Sobic009G145500--Sobic001G231400 Sobic003G268600 Sobic003G268600 Sobic009G145500--Sobic003G268600 Sobic009G145500--Sobic002G338500 Sobic006G235000 Sobic006G235000 Sobic009G145500--Sobic006G235000 Sobic009G145500--Sobic009G145600 Sobic006G268800 Sobic006G268800 Sobic009G145500--Sobic006G268800 Sobic002G055700 Sobic002G055700 Sobic003G303100--Sobic002G055700 Sobic001G318700 Sobic001G318700 Sobic003G303100--Sobic001G318700 Sobic004G189400 Sobic004G189400 Sobic003G303100--Sobic004G189400 Sobic003G382600 Sobic003G382600 Sobic003G303100--Sobic003G382600 Sobic004G237800 Sobic004G237800 Sobic003G303100--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic003G303100--Sobic003G426400 Sobic003G303100--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G303100--Sobic005G029200 Sobic005G063100 Sobic005G063100 Sobic003G303100--Sobic005G063100 Sobic004G161751--Sobic003G079200 Sobic004G161751--Sobic003G073380 Sobic005G086600 Sobic005G086600 Sobic004G161751--Sobic005G086600 Sobic004G161751--Sobic006G008000 Sobic004G161751--Sobic009G145500 Sobic004G161751--Sobic009G145600 Sobic002G063800 Sobic002G063800 Sobic004G161751--Sobic002G063800 Sobic004G161751--Sobic006G235000 Sobic004G161751--Sobic003G043600 Sobic003G043600--Sobic002G338500 Sobic003G043600--Sobic009G145500 Sobic003G043600--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic003G043600--Sobic006G075400 Sobic003G442100 Sobic003G442100 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic009G184000 Sobic009G184000 Sobic003G043600--Sobic009G184000 Sobic003G043600--Sobic009G145700 Sobic003G043600--Sobic001G318700 Sobic001G401100--Sobic009G145500 Sobic001G401100--Sobic006G154500 Sobic001G401100--Sobic009G145600 Sobic006G121500 Sobic006G121500 Sobic001G401100--Sobic006G121500 Sobic001G401100--Sobic003G043600 Sobic001G401100--Sobic003G303100 Sobic001G401100--Sobic003G073380 Sobic001G401100--Sobic004G148200 Sobic001G401100--Sobic003G426400 Sobic010G175800--Sobic006G154500 Sobic010G175800--Sobic006G154400 Sobic010G175800--Sobic004G161751 Sobic010G175800--Sobic003G043600 Sobic010G175800--Sobic009G145500 Sobic010G175800--Sobic002G338500 Sobic010G175800--Sobic003G073380 Sobic010G175800--Sobic003G079200 Sobic010G175800--Sobic003G303100 Sobic002G338500--Sobic003G043600 Sobic002G338500--Sobic003G382600 Sobic002G338500--Sobic002G055700 Sobic010G156500 Sobic010G156500 Sobic002G338500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G338500--Sobic003G364300 Sobic002G338500--Sobic009G145500 Sobic002G338500--Sobic009G145700 Sobic002G353900 Sobic002G353900 Sobic002G338500--Sobic002G353900 Sobic005G196800 Sobic005G196800 Sobic002G338500--Sobic005G196800 Sobic004G203700--Sobic003G303100 Sobic004G203700--Sobic002G055700 Sobic004G203700--Sobic002G338500 Sobic001G318500 Sobic001G318500 Sobic004G203700--Sobic001G318500 Sobic004G203700--Sobic003G426400 Sobic004G203700--Sobic003G043600 Sobic004G203700--Sobic003G382600 Sobic002G200600 Sobic002G200600 Sobic004G203700--Sobic002G200600 Sobic001G367600 Sobic001G367600 Sobic004G203700--Sobic001G367600
Octagon: transcription factors


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