Gene annotation
Transcriptome id Sobic.001G401100.1
Synonym Sb01g037950, PYL6, RCAR9
Functional annotation pathogenesis-related Bet v I family protein, putative, expressed
UniProt C5WMM1
Pfam PF00407
Panther DB PTHR31213 PTHR31213:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009607; response to biotic stimulus GO:0006952defense response


Orthologs (automatic annotation)
TAIR AT2G40330 : PYR1-like 6
RAP-DB (Rice) LOC_Os03g18850.1 : pathogenesis-related Bet v I family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002072 , Zm00025a002073
Brachypodium KQK22066
Barley HORVU4Hr1G054870.3 , HORVU4Hr1G054870.6 , HORVU4Hr1G054870.7 , HORVU4Hr1G054870.4 , HORVU4Hr1G054870.5
Wheat TraesCS4A02G116400 , TraesCS2B02G442700 , TraesCS2D02G317800 , TraesCS2B02G500200 , TraesCS4B02G187800 , TraesCS2A02G423300 , TraesCS7D02G164500 , TraesCS2B02G500100 , TraesCS4D02G189200 , TraesCS4D02G189200 , TraesCS7A02G162600 , TraesCS2D02G420900 , TraesCS1B02G115600 , TraesCS2B02G500300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.006G154500 GEM, putative, expressed -
3 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.006G121500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
6 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
7 Sobic.003G073380 - -
8 Sobic.004G148200 Cupin domain containing protein, expressed -
9 Sobic.003G426400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
11 Sobic.002G367400 esterase, putative, expressed -
12 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.006G240600 - -
14 Sobic.004G161751 - -
15 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
16 Sobic.003G043500 - -
17 Sobic.003G268600 - -
18 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
19 Sobic.004G245700 expressed protein -
20 Sobic.010G259300 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G401100 Sobic001G401100 Sobic009G145500 Sobic009G145500 Sobic001G401100--Sobic009G145500 Sobic006G154500 Sobic006G154500 Sobic001G401100--Sobic006G154500 Sobic009G145600 Sobic009G145600 Sobic001G401100--Sobic009G145600 Sobic006G121500 Sobic006G121500 Sobic001G401100--Sobic006G121500 Sobic003G043600 Sobic003G043600 Sobic001G401100--Sobic003G043600 Sobic003G303100 Sobic003G303100 Sobic001G401100--Sobic003G303100 Sobic003G073380 Sobic003G073380 Sobic001G401100--Sobic003G073380 Sobic004G148200 Sobic004G148200 Sobic001G401100--Sobic004G148200 Sobic003G426400 Sobic003G426400 Sobic001G401100--Sobic003G426400 Sobic009G145500--Sobic003G043600 Sobic009G145500--Sobic003G073380 Sobic009G145500--Sobic004G148200 Sobic001G231400 Sobic001G231400 Sobic009G145500--Sobic001G231400 Sobic003G268600 Sobic003G268600 Sobic009G145500--Sobic003G268600 Sobic002G338500 Sobic002G338500 Sobic009G145500--Sobic002G338500 Sobic006G235000 Sobic006G235000 Sobic009G145500--Sobic006G235000 Sobic009G145500--Sobic009G145600 Sobic006G268800 Sobic006G268800 Sobic009G145500--Sobic006G268800 Sobic006G154400 Sobic006G154400 Sobic006G154500--Sobic006G154400 Sobic006G154500--Sobic009G145500 Sobic006G154500--Sobic003G303100 Sobic004G161751 Sobic004G161751 Sobic006G154500--Sobic004G161751 Sobic006G154500--Sobic003G043600 Sobic006G154500--Sobic001G401100 Sobic010G175800 Sobic010G175800 Sobic006G154500--Sobic010G175800 Sobic006G154500--Sobic002G338500 Sobic004G203700 Sobic004G203700 Sobic006G154500--Sobic004G203700 Sobic009G145700 Sobic009G145700 Sobic009G145600--Sobic009G145700 Sobic008G066401 Sobic008G066401 Sobic009G145600--Sobic008G066401 Sobic008G066200 Sobic008G066200 Sobic009G145600--Sobic008G066200 Sobic003G079200 Sobic003G079200 Sobic009G145600--Sobic003G079200 Sobic006G008000 Sobic006G008000 Sobic009G145600--Sobic006G008000 Sobic003G043500 Sobic003G043500 Sobic009G145600--Sobic003G043500 Sobic004G245700 Sobic004G245700 Sobic009G145600--Sobic004G245700 Sobic002G012500 Sobic002G012500 Sobic009G145600--Sobic002G012500 Sobic009G200566 Sobic009G200566 Sobic009G145600--Sobic009G200566 Sobic006G121500--Sobic001G401100 Sobic002G055600 Sobic002G055600 Sobic006G121500--Sobic002G055600 Sobic006G121500--Sobic004G148200 Sobic002G367400 Sobic002G367400 Sobic006G121500--Sobic002G367400 Sobic002G055700 Sobic002G055700 Sobic006G121500--Sobic002G055700 Sobic010G069200 Sobic010G069200 Sobic006G121500--Sobic010G069200 Sobic004G189500 Sobic004G189500 Sobic006G121500--Sobic004G189500 Sobic004G050000 Sobic004G050000 Sobic006G121500--Sobic004G050000 Sobic006G240600 Sobic006G240600 Sobic006G121500--Sobic006G240600 Sobic003G043600--Sobic002G338500 Sobic003G043600--Sobic009G145500 Sobic003G043600--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic003G043600--Sobic006G075400 Sobic003G442100 Sobic003G442100 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic009G184000 Sobic009G184000 Sobic003G043600--Sobic009G184000 Sobic003G043600--Sobic009G145700 Sobic001G318700 Sobic001G318700 Sobic003G043600--Sobic001G318700 Sobic003G303100--Sobic002G055700 Sobic003G303100--Sobic001G318700 Sobic004G189400 Sobic004G189400 Sobic003G303100--Sobic004G189400 Sobic003G382600 Sobic003G382600 Sobic003G303100--Sobic003G382600 Sobic004G237800 Sobic004G237800 Sobic003G303100--Sobic004G237800 Sobic003G303100--Sobic003G426400 Sobic003G303100--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G303100--Sobic005G029200 Sobic005G063100 Sobic005G063100 Sobic003G303100--Sobic005G063100 Sobic003G269000 Sobic003G269000 Sobic003G073380--Sobic003G269000 Sobic005G086600 Sobic005G086600 Sobic003G073380--Sobic005G086600 Sobic003G073380--Sobic004G161751 Sobic003G073380--Sobic009G145500 Sobic003G073380--Sobic003G268600 Sobic003G073380--Sobic003G043600 Sobic001G330400 Sobic001G330400 Sobic003G073380--Sobic001G330400 Sobic003G050300 Sobic003G050300 Sobic003G073380--Sobic003G050300 Sobic003G073380--Sobic003G079200 Sobic004G148200--Sobic005G029200 Sobic004G148200--Sobic002G055700 Sobic004G148200--Sobic004G189500 Sobic007G227300 Sobic007G227300 Sobic004G148200--Sobic007G227300 Sobic004G148200--Sobic004G189400 Sobic004G148200--Sobic003G303100 Sobic004G148200--Sobic006G268800 Sobic004G148200--Sobic009G145500 Sobic003G200700 Sobic003G200700 Sobic004G148200--Sobic003G200700 Sobic003G426400--Sobic002G055700 Sobic003G426400--Sobic003G303100 Sobic009G111000 Sobic009G111000 Sobic003G426400--Sobic009G111000 Sobic001G367600 Sobic001G367600 Sobic003G426400--Sobic001G367600 Sobic003G426400--Sobic003G043600 Sobic003G426400--Sobic004G237800 Sobic003G426400--Sobic005G063100 Sobic006G141700 Sobic006G141700 Sobic003G426400--Sobic006G141700 Sobic003G426400--Sobic004G203700
Octagon: transcription factors


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