Gene annotation
Transcriptome id Sobic.001G449100.1
Synonym Sb01g042210
Functional annotation E2F-related protein, putative, expressed
UniProt C5WRT2
Pfam PF04678
Panther DB PTHR13462 PTHR13462:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23790 : Protein of unknown function (DUF607)
RAP-DB (Rice) LOC_Os03g13050.1 : E2F-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a052992 , Zm00025a001399 , Zm00025a006424 , Zm00025a006422
Brachypodium KQK22771
Barley HORVU4Hr1G066140.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G079200 - -
2 Sobic.002G243000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
3 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.006G240600 - -
5 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
6 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
7 Sobic.007G215600 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
8 Sobic.002G063800 transferase family protein, putative, expressed -
9 Sobic.004G161751 - -
10 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
11 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.003G073380 - -
13 Sobic.001G401100 pathogenesis-related Bet v I family protein, putative, expressed -
14 Sobic.010G259300 transferase family protein, putative, expressed -
15 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
16 Sobic.006G121500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.006G154500 GEM, putative, expressed -
18 Sobic.003G313100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
20 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G449100 Sobic001G449100 Sobic003G079200 Sobic003G079200 Sobic001G449100--Sobic003G079200 Sobic002G243000 Sobic002G243000 Sobic001G449100--Sobic002G243000 Sobic008G158600 Sobic008G158600 Sobic001G449100--Sobic008G158600 Sobic006G240600 Sobic006G240600 Sobic001G449100--Sobic006G240600 Sobic002G369400 Sobic002G369400 Sobic001G449100--Sobic002G369400 Sobic001G242000 Sobic001G242000 Sobic001G449100--Sobic001G242000 Sobic007G215600 Sobic007G215600 Sobic001G449100--Sobic007G215600 Sobic002G063800 Sobic002G063800 Sobic001G449100--Sobic002G063800 Sobic004G161751 Sobic004G161751 Sobic001G449100--Sobic004G161751 Sobic006G008000 Sobic006G008000 Sobic003G079200--Sobic006G008000 Sobic008G066200 Sobic008G066200 Sobic003G079200--Sobic008G066200 Sobic002G012300 Sobic002G012300 Sobic003G079200--Sobic002G012300 Sobic009G145600 Sobic009G145600 Sobic003G079200--Sobic009G145600 Sobic003G079200--Sobic008G158600 Sobic002G012500 Sobic002G012500 Sobic003G079200--Sobic002G012500 Sobic003G079200--Sobic002G063800 Sobic003G079200--Sobic004G161751 Sobic005G086600 Sobic005G086600 Sobic003G079200--Sobic005G086600 Sobic002G243000--Sobic006G240600 Sobic003G050300 Sobic003G050300 Sobic002G243000--Sobic003G050300 Sobic009G145500 Sobic009G145500 Sobic002G243000--Sobic009G145500 Sobic008G027600 Sobic008G027600 Sobic002G243000--Sobic008G027600 Sobic002G243000--Sobic004G161751 Sobic003G073380 Sobic003G073380 Sobic002G243000--Sobic003G073380 Sobic002G243000--Sobic001G449100 Sobic002G243000--Sobic002G369400 Sobic001G401100 Sobic001G401100 Sobic002G243000--Sobic001G401100 Sobic008G158600--Sobic002G012300 Sobic008G158600--Sobic003G079200 Sobic008G158501 Sobic008G158501 Sobic008G158600--Sobic008G158501 Sobic008G158600--Sobic002G012500 Sobic008G158600--Sobic002G063800 Sobic008G022000 Sobic008G022000 Sobic008G158600--Sobic008G022000 Sobic008G036800 Sobic008G036800 Sobic008G158600--Sobic008G036800 Sobic008G158600--Sobic006G008000 Sobic001G259400 Sobic001G259400 Sobic008G158600--Sobic001G259400 Sobic006G240600--Sobic009G145500 Sobic006G240600--Sobic002G243000 Sobic006G240600--Sobic003G073380 Sobic006G240600--Sobic004G161751 Sobic010G259300 Sobic010G259300 Sobic006G240600--Sobic010G259300 Sobic006G240600--Sobic001G401100 Sobic006G240600--Sobic009G145600 Sobic006G154500 Sobic006G154500 Sobic006G240600--Sobic006G154500 Sobic003G043600 Sobic003G043600 Sobic006G240600--Sobic003G043600 Sobic002G369400--Sobic008G027600 Sobic002G369400--Sobic001G242000 Sobic001G114900 Sobic001G114900 Sobic002G369400--Sobic001G114900 Sobic010G062300 Sobic010G062300 Sobic002G369400--Sobic010G062300 Sobic002G369400--Sobic002G012300 Sobic002G369400--Sobic003G079200 Sobic002G369400--Sobic008G022000 Sobic002G369400--Sobic002G063800 Sobic002G369400--Sobic008G158501 Sobic007G054900 Sobic007G054900 Sobic001G242000--Sobic007G054900 Sobic001G242000--Sobic002G369400 Sobic001G242000--Sobic002G063800 Sobic001G330300 Sobic001G330300 Sobic001G242000--Sobic001G330300 Sobic010G270700 Sobic010G270700 Sobic001G242000--Sobic010G270700 Sobic001G242000--Sobic010G062300 Sobic006G050800 Sobic006G050800 Sobic001G242000--Sobic006G050800 Sobic010G009900 Sobic010G009900 Sobic001G242000--Sobic010G009900 Sobic001G242000--Sobic001G449100 Sobic004G148100 Sobic004G148100 Sobic007G215600--Sobic004G148100 Sobic006G162100 Sobic006G162100 Sobic007G215600--Sobic006G162100 Sobic005G177600 Sobic005G177600 Sobic007G215600--Sobic005G177600 Sobic007G215600--Sobic001G449100 Sobic004G189500 Sobic004G189500 Sobic007G215600--Sobic004G189500 Sobic007G215600--Sobic009G145600 Sobic004G148200 Sobic004G148200 Sobic007G215600--Sobic004G148200 Sobic007G215600--Sobic002G369400 Sobic007G215600--Sobic006G154500 Sobic002G063800--Sobic003G079200 Sobic006G235000 Sobic006G235000 Sobic002G063800--Sobic006G235000 Sobic002G063800--Sobic010G062300 Sobic002G063800--Sobic006G008000 Sobic002G063800--Sobic002G012300 Sobic002G063800--Sobic008G158600 Sobic002G063800--Sobic009G145600 Sobic002G063800--Sobic005G086600 Sobic002G063800--Sobic002G012500 Sobic004G161751--Sobic003G079200 Sobic004G161751--Sobic003G073380 Sobic004G161751--Sobic005G086600 Sobic004G161751--Sobic006G008000 Sobic004G161751--Sobic009G145500 Sobic004G161751--Sobic009G145600 Sobic004G161751--Sobic002G063800 Sobic004G161751--Sobic006G235000 Sobic004G161751--Sobic003G043600
Octagon: transcription factors


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