Gene annotation
Transcriptome id Sobic.001G242000.1
Synonym CSLD5, SOS6, ATCSLD5
Functional annotation CSLF7 - cellulose synthase-like family F
beta1,3
1,4 glucan synthase, expressed
UniProt A0A1B6QKN9
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF63
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G03050 : cellulose synthase-like D3
RAP-DB (Rice) LOC_Os10g20260.1 : CSLF7 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed
MaizeGDB (Corn) Zm00025a048342 , Zm00025a054306 , Zm00025a050769 , Zm00025a030058 , Zm00025a006857 , Zm00025a003543
Brachypodium KQK15829 , KQJ86377
Barley HORVU1Hr1G039250.10 , HORVU1Hr1G039250.11 , HORVU1Hr1G039250.12 , HORVU1Hr1G039250.13 , HORVU1Hr1G039250.14 , HORVU1Hr1G039250.15 , HORVU1Hr1G039250.16 , HORVU1Hr1G039250.17 , HORVU1Hr1G039250.18 , HORVU1Hr1G039250.19 , HORVU1Hr1G039250.2 , HORVU1Hr1G039250.3 , HORVU1Hr1G039250.6 , HORVU1Hr1G039250.4 , HORVU1Hr1G039250.5 , HORVU1Hr1G039250.8 , HORVU1Hr1G039250.9 , HORVU1Hr1G039250.25 , HORVU1Hr1G039250.24 , HORVU1Hr1G039250.27 , HORVU1Hr1G039250.26 , HORVU1Hr1G039250.21 , HORVU1Hr1G039250.20 , HORVU1Hr1G039250.23 , HORVU1Hr1G039250.22 , HORVU1Hr1G039250.29 , HORVU1Hr1G039250.28 , HORVU1Hr1G022900.2 , HORVU1Hr1G022900.3 , HORVU1Hr1G022900.1 , HORVU1Hr1G022900.6 , HORVU1Hr1G022900.7 , HORVU1Hr1G022900.4 , HORVU1Hr1G022900.5 , HORVU1Hr1G022900.8 , HORVU1Hr1G022900.9 , HORVU1Hr1G039250.30 , HORVU5Hr1G113750.4 , HORVU5Hr1G113750.1 , HORVU5Hr1G113750.2 , HORVU5Hr1G113750.3 , HORVU1Hr1G022900.10 , HORVU1Hr1G022900.11
Wheat TraesCS2D02G217000 , TraesCS2A02G210000 , TraesCS2D02G216800 , TraesCSU02G003300 , TraesCS2B02G236200 , TraesCS2B02G236200 , TraesCS2B02G236400 , TraesCS5B02G495200 , TraesCS1A02G099100 , TraesCS5A02G482200 , TraesCS1B02G167200 , TraesCS5D02G495800 , TraesCS1D02G107100 , TraesCS1D02G146600 , TraesCS1D02G146600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
2 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
3 Sobic.002G063800 transferase family protein, putative, expressed -
4 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
5 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.010G062300 plant protein of unknown function domain containing protein, expressed -
7 Sobic.006G050800 expressed protein -
8 Sobic.010G009900 - -
9 Sobic.001G449100 E2F-related protein, putative, expressed -
10 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.006G217100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
12 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
13 Sobic.004G316350 - -
14 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.008G158501 - -
16 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.003G079200 - -
18 Sobic.003G282100 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
19 Sobic.002G243000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
20 Sobic.002G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@SCP-like extracellular protein, expressed -


Gene co-expression network
sample Sobic001G242000 Sobic001G242000 Sobic007G054900 Sobic007G054900 Sobic001G242000--Sobic007G054900 Sobic002G369400 Sobic002G369400 Sobic001G242000--Sobic002G369400 Sobic002G063800 Sobic002G063800 Sobic001G242000--Sobic002G063800 Sobic001G330300 Sobic001G330300 Sobic001G242000--Sobic001G330300 Sobic010G270700 Sobic010G270700 Sobic001G242000--Sobic010G270700 Sobic010G062300 Sobic010G062300 Sobic001G242000--Sobic010G062300 Sobic006G050800 Sobic006G050800 Sobic001G242000--Sobic006G050800 Sobic010G009900 Sobic010G009900 Sobic001G242000--Sobic010G009900 Sobic001G449100 Sobic001G449100 Sobic001G242000--Sobic001G449100 Sobic007G054900--Sobic010G009900 Sobic007G054900--Sobic001G242000 Sobic008G158600 Sobic008G158600 Sobic007G054900--Sobic008G158600 Sobic004G292600 Sobic004G292600 Sobic007G054900--Sobic004G292600 Sobic002G012300 Sobic002G012300 Sobic007G054900--Sobic002G012300 Sobic005G011900 Sobic005G011900 Sobic007G054900--Sobic005G011900 Sobic007G054900--Sobic002G369400 Sobic001G162233 Sobic001G162233 Sobic007G054900--Sobic001G162233 Sobic008G158501 Sobic008G158501 Sobic007G054900--Sobic008G158501 Sobic008G027600 Sobic008G027600 Sobic002G369400--Sobic008G027600 Sobic002G369400--Sobic001G242000 Sobic001G114900 Sobic001G114900 Sobic002G369400--Sobic001G114900 Sobic002G369400--Sobic010G062300 Sobic002G369400--Sobic002G012300 Sobic003G079200 Sobic003G079200 Sobic002G369400--Sobic003G079200 Sobic008G022000 Sobic008G022000 Sobic002G369400--Sobic008G022000 Sobic002G369400--Sobic002G063800 Sobic002G369400--Sobic008G158501 Sobic002G063800--Sobic003G079200 Sobic006G235000 Sobic006G235000 Sobic002G063800--Sobic006G235000 Sobic002G063800--Sobic010G062300 Sobic006G008000 Sobic006G008000 Sobic002G063800--Sobic006G008000 Sobic002G063800--Sobic002G012300 Sobic002G063800--Sobic008G158600 Sobic009G145600 Sobic009G145600 Sobic002G063800--Sobic009G145600 Sobic005G086600 Sobic005G086600 Sobic002G063800--Sobic005G086600 Sobic002G012500 Sobic002G012500 Sobic002G063800--Sobic002G012500 Sobic003G299300 Sobic003G299300 Sobic001G330300--Sobic003G299300 Sobic004G295100 Sobic004G295100 Sobic001G330300--Sobic004G295100 Sobic008G009400 Sobic008G009400 Sobic001G330300--Sobic008G009400 Sobic001G330300--Sobic006G050800 Sobic001G330300--Sobic010G270700 Sobic004G141100 Sobic004G141100 Sobic001G330300--Sobic004G141100 Sobic010G196000 Sobic010G196000 Sobic001G330300--Sobic010G196000 Sobic001G330300--Sobic001G242000 Sobic003G282100 Sobic003G282100 Sobic001G330300--Sobic003G282100 Sobic010G270700--Sobic003G282100 Sobic010G270700--Sobic008G009400 Sobic010G270700--Sobic001G330300 SobicK026900 SobicK026900 Sobic010G270700--SobicK026900 Sobic004G297900 Sobic004G297900 Sobic010G270700--Sobic004G297900 Sobic010G270700--Sobic003G299300 Sobic008G127933 Sobic008G127933 Sobic010G270700--Sobic008G127933 Sobic003G311800 Sobic003G311800 Sobic010G270700--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic010G270700--Sobic009G109000 Sobic010G062300--Sobic002G063800 Sobic010G062300--Sobic006G235000 Sobic010G062300--Sobic006G008000 Sobic010G062300--Sobic009G145600 Sobic010G062300--Sobic003G079200 Sobic010G062300--Sobic002G369400 Sobic009G145500 Sobic009G145500 Sobic010G062300--Sobic009G145500 Sobic004G161751 Sobic004G161751 Sobic010G062300--Sobic004G161751 Sobic010G062300--Sobic005G086600 Sobic004G180700 Sobic004G180700 Sobic006G050800--Sobic004G180700 Sobic006G050800--Sobic010G196000 Sobic006G050800--Sobic001G330300 Sobic006G202600 Sobic006G202600 Sobic006G050800--Sobic006G202600 Sobic006G050800--Sobic004G295100 Sobic004G301600 Sobic004G301600 Sobic006G050800--Sobic004G301600 Sobic002G301900 Sobic002G301900 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic006G050800--Sobic010G009900 Sobic010G009900--Sobic007G054900 Sobic010G009900--Sobic006G050800 Sobic009G116600 Sobic009G116600 Sobic010G009900--Sobic009G116600 Sobic010G009900--Sobic001G242000 Sobic010G009900--SobicK026900 Sobic010G045500 Sobic010G045500 Sobic010G009900--Sobic010G045500 Sobic010G009900--Sobic002G369400 Sobic010G009900--Sobic003G136200 Sobic010G009900--Sobic002G012300 Sobic001G449100--Sobic003G079200 Sobic002G243000 Sobic002G243000 Sobic001G449100--Sobic002G243000 Sobic001G449100--Sobic008G158600 Sobic006G240600 Sobic006G240600 Sobic001G449100--Sobic006G240600 Sobic001G449100--Sobic002G369400 Sobic001G449100--Sobic001G242000 Sobic007G215600 Sobic007G215600 Sobic001G449100--Sobic007G215600 Sobic001G449100--Sobic002G063800 Sobic001G449100--Sobic004G161751
Octagon: transcription factors


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