Gene annotation
Transcriptome id Sobic.007G054900.1
Synonym Sb07g004430
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt C5YHH2
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50150 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os08g07040.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019555 , Zm00025a055056 , Zm00025a030034 , Zm00025a049809
Brachypodium KQJ95247 , KQK19340
Barley HORVU6Hr1G000590.1
Wheat TraesCS6A02G164600 , TraesCS6B02G187100 , TraesCS6D02G148500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G009900 - -
2 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
3 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
6 Sobic.005G011900 - -
7 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
8 Sobic.001G162233 - -
9 Sobic.008G158501 - -
10 Sobic.002G154900 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
11 Sobic.006G050800 expressed protein -
12 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
13 Sobic.006G234466 - -
14 Sobic.002G063800 transferase family protein, putative, expressed -
15 Sobic.001G449100 E2F-related protein, putative, expressed -
16 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
17 Sobic.004G165100 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
18 Sobic.003G136200 Cupin domain containing protein, expressed -
19 Sobic.006G217100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
20 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -


Gene co-expression network
sample Sobic007G054900 Sobic007G054900 Sobic010G009900 Sobic010G009900 Sobic007G054900--Sobic010G009900 Sobic001G242000 Sobic001G242000 Sobic007G054900--Sobic001G242000 Sobic008G158600 Sobic008G158600 Sobic007G054900--Sobic008G158600 Sobic004G292600 Sobic004G292600 Sobic007G054900--Sobic004G292600 Sobic002G012300 Sobic002G012300 Sobic007G054900--Sobic002G012300 Sobic005G011900 Sobic005G011900 Sobic007G054900--Sobic005G011900 Sobic002G369400 Sobic002G369400 Sobic007G054900--Sobic002G369400 Sobic001G162233 Sobic001G162233 Sobic007G054900--Sobic001G162233 Sobic008G158501 Sobic008G158501 Sobic007G054900--Sobic008G158501 Sobic010G009900--Sobic007G054900 Sobic006G050800 Sobic006G050800 Sobic010G009900--Sobic006G050800 Sobic009G116600 Sobic009G116600 Sobic010G009900--Sobic009G116600 Sobic010G009900--Sobic001G242000 SobicK026900 SobicK026900 Sobic010G009900--SobicK026900 Sobic010G045500 Sobic010G045500 Sobic010G009900--Sobic010G045500 Sobic010G009900--Sobic002G369400 Sobic003G136200 Sobic003G136200 Sobic010G009900--Sobic003G136200 Sobic010G009900--Sobic002G012300 Sobic001G242000--Sobic007G054900 Sobic001G242000--Sobic002G369400 Sobic002G063800 Sobic002G063800 Sobic001G242000--Sobic002G063800 Sobic001G330300 Sobic001G330300 Sobic001G242000--Sobic001G330300 Sobic010G270700 Sobic010G270700 Sobic001G242000--Sobic010G270700 Sobic010G062300 Sobic010G062300 Sobic001G242000--Sobic010G062300 Sobic001G242000--Sobic006G050800 Sobic001G242000--Sobic010G009900 Sobic001G449100 Sobic001G449100 Sobic001G242000--Sobic001G449100 Sobic008G158600--Sobic002G012300 Sobic003G079200 Sobic003G079200 Sobic008G158600--Sobic003G079200 Sobic008G158600--Sobic008G158501 Sobic002G012500 Sobic002G012500 Sobic008G158600--Sobic002G012500 Sobic008G158600--Sobic002G063800 Sobic008G022000 Sobic008G022000 Sobic008G158600--Sobic008G022000 Sobic008G036800 Sobic008G036800 Sobic008G158600--Sobic008G036800 Sobic006G008000 Sobic006G008000 Sobic008G158600--Sobic006G008000 Sobic001G259400 Sobic001G259400 Sobic008G158600--Sobic001G259400 Sobic001G539300 Sobic001G539300 Sobic004G292600--Sobic001G539300 Sobic004G292600--Sobic001G162233 Sobic010G156400 Sobic010G156400 Sobic004G292600--Sobic010G156400 Sobic004G292600--Sobic005G011900 Sobic002G012300--Sobic008G158600 Sobic002G012300--Sobic008G158501 Sobic002G012300--Sobic008G022000 Sobic002G012300--Sobic003G079200 Sobic002G012300--Sobic006G008000 Sobic002G012300--Sobic002G012500 Sobic008G066200 Sobic008G066200 Sobic002G012300--Sobic008G066200 Sobic002G012300--Sobic008G036800 Sobic002G012300--Sobic002G063800 Sobic005G011900--Sobic010G156400 Sobic005G011900--Sobic001G539300 Sobic005G011900--Sobic001G162233 Sobic005G011900--Sobic004G292600 Sobic008G027600 Sobic008G027600 Sobic002G369400--Sobic008G027600 Sobic002G369400--Sobic001G242000 Sobic001G114900 Sobic001G114900 Sobic002G369400--Sobic001G114900 Sobic002G369400--Sobic010G062300 Sobic002G369400--Sobic002G012300 Sobic002G369400--Sobic003G079200 Sobic002G369400--Sobic008G022000 Sobic002G369400--Sobic002G063800 Sobic002G369400--Sobic008G158501 Sobic001G162233--Sobic004G292600 Sobic001G162233--Sobic005G011900 Sobic001G162233--Sobic008G158600 Sobic001G162233--Sobic002G012300 Sobic001G162233--Sobic010G156400 Sobic001G162233--Sobic008G158501 Sobic001G162233--Sobic001G539300 Sobic008G158501--Sobic002G012300 Sobic008G158501--Sobic008G158600 Sobic008G158501--Sobic008G022000 Sobic008G158501--Sobic003G079200 Sobic008G158501--Sobic002G012500 Sobic008G158501--Sobic006G008000 Sobic008G158501--Sobic002G063800 Sobic008G158501--Sobic008G066200 Sobic008G158501--Sobic008G036800
Octagon: transcription factors


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