Gene annotation
Transcriptome id Sobic.004G292600.1
Synonym
Functional annotation LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt -
Pfam PF00234
Panther DB PTHR31731 PTHR31731:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12520 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os02g44310.1 : LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a052000 , Zm00025a021411 , Zm00025a003292 , Zm00025a052004 , Zm00025a052003
Brachypodium -
Barley HORVU4Hr1G087780.10 , HORVU4Hr1G087780.9
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G539300 expressed protein -
2 Sobic.001G539300 expressed protein -
3 Sobic.001G539300 expressed protein -
4 Sobic.001G539300 expressed protein -
5 Sobic.001G539300 expressed protein -
6 Sobic.001G539300 expressed protein -
7 Sobic.001G162233 - -
8 Sobic.010G156400 expressed protein -
9 Sobic.005G011900 - -
10 Sobic.008G184700 CND41, chloroplast nucleoid DNA binding protein, putative, expressed -
11 Sobic.008G026000 expressed protein -
12 Sobic.009G178550 - -
13 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
14 Sobic.001G246900 MBTB45 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.006G198000 expressed protein -
16 Sobic.008G158501 - -
17 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.005G203700 - -
19 Sobic.001G414300 - -
20 Sobic.002G154900 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase


Gene co-expression network
sample Sobic004G292600 Sobic004G292600 Sobic001G539300 Sobic001G539300 Sobic004G292600--Sobic001G539300 Sobic001G162233 Sobic001G162233 Sobic004G292600--Sobic001G162233 Sobic010G156400 Sobic010G156400 Sobic004G292600--Sobic010G156400 Sobic005G011900 Sobic005G011900 Sobic004G292600--Sobic005G011900 Sobic001G539300--Sobic001G539300 Sobic001G539300--Sobic010G156400 Sobic009G178550 Sobic009G178550 Sobic001G539300--Sobic009G178550 Sobic008G184700 Sobic008G184700 Sobic001G539300--Sobic008G184700 Sobic001G539300--Sobic004G292600 Sobic001G162233--Sobic004G292600 Sobic001G162233--Sobic005G011900 Sobic008G158600 Sobic008G158600 Sobic001G162233--Sobic008G158600 Sobic002G012300 Sobic002G012300 Sobic001G162233--Sobic002G012300 Sobic001G162233--Sobic010G156400 Sobic008G158501 Sobic008G158501 Sobic001G162233--Sobic008G158501 Sobic001G162233--Sobic001G539300 Sobic010G156400--Sobic001G539300 Sobic001G246900 Sobic001G246900 Sobic010G156400--Sobic001G246900 Sobic010G156400--Sobic009G178550 Sobic010G156400--Sobic008G184700 Sobic005G011900--Sobic010G156400 Sobic005G011900--Sobic001G539300 Sobic005G011900--Sobic001G162233 Sobic005G011900--Sobic004G292600
Octagon: transcription factors


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