Gene annotation
Transcriptome id Sobic.003G136200.1
Synonym GLP5, Sb03g011590
Functional annotation Cupin domain containing protein, expressed
UniProt C5XHF1
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09560 : germin-like protein 5
RAP-DB (Rice) LOC_Os01g18170.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009755 , Zm00025a035173 , Zm00025a024209 , Zm00025a045177 , Zm00025a025978 , Zm00025a019053
Brachypodium KQK03596 , KQK03989 , PNT62629
Barley HORVU3Hr1G107930.2 , HORVU3Hr1G107930.1 , HORVU3Hr1G107870.1 , HORVU3Hr1G107830.1 , HORVU3Hr1G107930.3 , HORVU6Hr1G089510.1 , HORVU6Hr1G089510.2 , HORVU3Hr1G107860.1 , HORVU6Hr1G089570.3 , HORVU6Hr1G089570.2 , HORVU6Hr1G089570.1 , HORVU6Hr1G089450.1
Wheat TraesCS6A02G382100 , TraesCS6D02G367000 , TraesCS6B02G421200 , TraesCS6B02G420800 , TraesCS6D02G366700 , TraesCS6D02G367700 , TraesCS6A02G382200 , TraesCSU02G057500 , TraesCS3D02G489700 , TraesCS3D02G490100 , TraesCS6B02G420700 , TraesCS6A02G382900 , TraesCS6B02G422100 , TraesCS7D02G477200 , TraesCS6A02G383000 , TraesCS6D02G367800 , TraesCS6B02G422000 , TraesCS6D02G366900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G050800 expressed protein -
2 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.006G009100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD40-like Beta Propeller Repeat family protein, expressed -
4 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
6 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.010G196000 DNA binding protein, putative, expressed -
8 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
9 Sobic.009G109000 expressed protein -
10 Sobic.005G067500 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
11 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
12 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
13 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.008G009400 - -
15 Sobic.004G180700 expressed protein -
16 Sobic.006G235200 expressed protein -
17 Sobic.001G242100 expressed protein -
18 Sobic.002G124500 expansin precursor, putative, expressed -
19 Sobic.004G301600 integral membrane protein, putative, expressed -
20 Sobic.010G009900 - -


Gene co-expression network
sample Sobic003G136200 Sobic003G136200 Sobic006G050800 Sobic006G050800 Sobic003G136200--Sobic006G050800 SobicK026900 SobicK026900 Sobic003G136200--SobicK026900 Sobic006G009100 Sobic006G009100 Sobic003G136200--Sobic006G009100 Sobic002G301900 Sobic002G301900 Sobic003G136200--Sobic002G301900 Sobic004G295100 Sobic004G295100 Sobic003G136200--Sobic004G295100 Sobic004G297900 Sobic004G297900 Sobic003G136200--Sobic004G297900 Sobic010G196000 Sobic010G196000 Sobic003G136200--Sobic010G196000 Sobic010G045500 Sobic010G045500 Sobic003G136200--Sobic010G045500 Sobic009G109000 Sobic009G109000 Sobic003G136200--Sobic009G109000 Sobic004G180700 Sobic004G180700 Sobic006G050800--Sobic004G180700 Sobic006G050800--Sobic010G196000 Sobic001G330300 Sobic001G330300 Sobic006G050800--Sobic001G330300 Sobic006G202600 Sobic006G202600 Sobic006G050800--Sobic006G202600 Sobic006G050800--Sobic004G295100 Sobic004G301600 Sobic004G301600 Sobic006G050800--Sobic004G301600 Sobic006G050800--Sobic002G301900 Sobic006G050800--Sobic003G136200 Sobic010G009900 Sobic010G009900 Sobic006G050800--Sobic010G009900 SobicK026900--Sobic004G297900 Sobic007G090469 Sobic007G090469 SobicK026900--Sobic007G090469 Sobic001G238300 Sobic001G238300 SobicK026900--Sobic001G238300 SobicK026900--Sobic006G202600 Sobic004G202400 Sobic004G202400 SobicK026900--Sobic004G202400 Sobic002G425000 Sobic002G425000 SobicK026900--Sobic002G425000 Sobic010G270700 Sobic010G270700 SobicK026900--Sobic010G270700 Sobic001G237900 Sobic001G237900 SobicK026900--Sobic001G237900 SobicK026900--Sobic004G295100 Sobic006G009000 Sobic006G009000 Sobic006G009100--Sobic006G009000 Sobic002G327100 Sobic002G327100 Sobic006G009100--Sobic002G327100 Sobic006G009100--Sobic003G136200 Sobic006G009100--Sobic010G196000 Sobic006G009100--Sobic001G330300 Sobic006G158400 Sobic006G158400 Sobic006G009100--Sobic006G158400 Sobic006G009100--Sobic004G295100 Sobic006G009100--Sobic006G050800 Sobic005G067500 Sobic005G067500 Sobic006G009100--Sobic005G067500 Sobic001G242100 Sobic001G242100 Sobic002G301900--Sobic001G242100 Sobic002G301900--Sobic010G045500 Sobic001G502000 Sobic001G502000 Sobic002G301900--Sobic001G502000 Sobic006G170600 Sobic006G170600 Sobic002G301900--Sobic006G170600 Sobic003G400900 Sobic003G400900 Sobic002G301900--Sobic003G400900 Sobic005G222500 Sobic005G222500 Sobic002G301900--Sobic005G222500 Sobic004G299600 Sobic004G299600 Sobic002G301900--Sobic004G299600 Sobic002G183700 Sobic002G183700 Sobic002G301900--Sobic002G183700 Sobic002G301900--Sobic004G180700 Sobic004G295100--Sobic010G196000 Sobic004G295100--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic004G295100--Sobic008G009400 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic003G311800 Sobic003G311800 Sobic004G295100--Sobic003G311800 Sobic006G235200 Sobic006G235200 Sobic004G295100--Sobic006G235200 Sobic001G300500 Sobic001G300500 Sobic004G295100--Sobic001G300500 Sobic004G295100--Sobic007G090469 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G297900--Sobic004G295100 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic002G261500 Sobic002G261500 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 Sobic010G196000--Sobic004G295100 Sobic010G196000--Sobic006G202600 Sobic010G196000--Sobic004G180700 Sobic010G196000--Sobic006G050800 Sobic003G426600 Sobic003G426600 Sobic010G196000--Sobic003G426600 Sobic002G105300 Sobic002G105300 Sobic010G196000--Sobic002G105300 Sobic010G196000--Sobic001G330300 Sobic009G188000 Sobic009G188000 Sobic010G196000--Sobic009G188000 Sobic010G196000--Sobic005G067500 Sobic010G045500--Sobic001G242100 Sobic010G045500--Sobic002G301900 Sobic006G234466 Sobic006G234466 Sobic010G045500--Sobic006G234466 Sobic010G045500--Sobic004G180700 Sobic005G215400 Sobic005G215400 Sobic010G045500--Sobic005G215400 Sobic004G322800 Sobic004G322800 Sobic010G045500--Sobic004G322800 Sobic010G045500--Sobic010G270700 Sobic010G045500--Sobic004G301600 Sobic008G128200 Sobic008G128200 Sobic010G045500--Sobic008G128200 Sobic009G109000--Sobic003G311800 Sobic009G109000--Sobic004G297900 Sobic001G049900 Sobic001G049900 Sobic009G109000--Sobic001G049900 Sobic008G055100 Sobic008G055100 Sobic009G109000--Sobic008G055100 Sobic003G053400 Sobic003G053400 Sobic009G109000--Sobic003G053400 Sobic003G411200 Sobic003G411200 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic009G109000--Sobic008G009400 Sobic001G430100 Sobic001G430100 Sobic009G109000--Sobic001G430100
Octagon: transcription factors


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