Gene annotation
Transcriptome id Sobic.005G067500.1
Synonym Sb05g005720
Functional annotation 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed
UniProt C5Y6L6
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF141
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology K05933; aminocyclopropanecarboxylate oxidase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G77330 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os11g08380.1 : 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a055410 , Zm00025a055408 , Zm00025a055407 , Zm00025a055405 , Zm00025a034057 , Zm00025a034056 , Zm00025a012763
Brachypodium KQJ89108 , KQK07503 , KQK07502
Barley HORVU1Hr1G020410.2 , HORVU1Hr1G020410.3 , HORVU1Hr1G020410.1 , HORVU1Hr1G020450.2 , HORVU1Hr1G020450.1 , HORVU1Hr1G020430.1 , HORVU4Hr1G017660.2 , HORVU4Hr1G017660.3 , HORVU4Hr1G017660.1
Wheat TraesCS4D02G095500 , TraesCSU02G067700 , TraesCS4A02G221300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G271300 carrier, putative, expressed -
2 Sobic.010G196000 DNA binding protein, putative, expressed -
3 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
4 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
5 Sobic.001G508532 - -
6 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.006G050800 expressed protein -
8 Sobic.009G109000 expressed protein -
9 Sobic.002G124500 expansin precursor, putative, expressed -
10 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.003G136200 Cupin domain containing protein, expressed -
12 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
13 Sobic.001G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.006G009100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD40-like Beta Propeller Repeat family protein, expressed -
15 Sobic.003G411200 CRAL/TRIO domain containing protein, expressed -
16 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
18 Sobic.006G235200 expressed protein -
19 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
20 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -


Gene co-expression network
sample Sobic005G067500 Sobic005G067500 Sobic010G271300 Sobic010G271300 Sobic005G067500--Sobic010G271300 Sobic010G196000 Sobic010G196000 Sobic005G067500--Sobic010G196000 Sobic006G202600 Sobic006G202600 Sobic005G067500--Sobic006G202600 Sobic004G295100 Sobic004G295100 Sobic005G067500--Sobic004G295100 Sobic001G508532 Sobic001G508532 Sobic005G067500--Sobic001G508532 Sobic004G297900 Sobic004G297900 Sobic005G067500--Sobic004G297900 Sobic006G050800 Sobic006G050800 Sobic005G067500--Sobic006G050800 Sobic009G109000 Sobic009G109000 Sobic005G067500--Sobic009G109000 Sobic002G124500 Sobic002G124500 Sobic005G067500--Sobic002G124500 Sobic010G271300--Sobic005G067500 Sobic010G271300--Sobic009G109000 Sobic004G318700 Sobic004G318700 Sobic010G271300--Sobic004G318700 Sobic001G238800 Sobic001G238800 Sobic010G271300--Sobic001G238800 Sobic003G093700 Sobic003G093700 Sobic010G271300--Sobic003G093700 Sobic009G188000 Sobic009G188000 Sobic010G271300--Sobic009G188000 Sobic002G213600 Sobic002G213600 Sobic010G271300--Sobic002G213600 Sobic010G271300--Sobic002G124500 Sobic010G106500 Sobic010G106500 Sobic010G271300--Sobic010G106500 Sobic010G196000--Sobic004G295100 Sobic010G196000--Sobic006G202600 Sobic004G180700 Sobic004G180700 Sobic010G196000--Sobic004G180700 Sobic010G196000--Sobic006G050800 Sobic003G426600 Sobic003G426600 Sobic010G196000--Sobic003G426600 Sobic002G105300 Sobic002G105300 Sobic010G196000--Sobic002G105300 Sobic001G330300 Sobic001G330300 Sobic010G196000--Sobic001G330300 Sobic010G196000--Sobic009G188000 Sobic010G196000--Sobic005G067500 Sobic006G202600--Sobic004G180700 Sobic006G202600--Sobic010G196000 Sobic006G202600--Sobic004G295100 Sobic006G170600 Sobic006G170600 Sobic006G202600--Sobic006G170600 Sobic004G301600 Sobic004G301600 Sobic006G202600--Sobic004G301600 SobicK026900 SobicK026900 Sobic006G202600--SobicK026900 Sobic006G202600--Sobic006G050800 Sobic006G202600--Sobic001G508532 Sobic007G090469 Sobic007G090469 Sobic006G202600--Sobic007G090469 Sobic004G295100--Sobic010G196000 Sobic004G295100--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic004G295100--Sobic008G009400 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic003G311800 Sobic003G311800 Sobic004G295100--Sobic003G311800 Sobic006G235200 Sobic006G235200 Sobic004G295100--Sobic006G235200 Sobic001G300500 Sobic001G300500 Sobic004G295100--Sobic001G300500 Sobic004G295100--Sobic007G090469 Sobic001G508532--Sobic006G202600 Sobic001G508532--Sobic002G124500 Sobic001G508532--Sobic004G318700 Sobic001G508532--Sobic010G196000 Sobic001G508532--Sobic004G295100 Sobic001G508532--Sobic005G067500 Sobic001G508532--Sobic010G106500 Sobic001G264000 Sobic001G264000 Sobic001G508532--Sobic001G264000 Sobic001G508532--Sobic006G170600 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic004G297900--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic004G297900--Sobic001G238300 Sobic004G297900--Sobic004G295100 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic002G261500 Sobic002G261500 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 Sobic006G050800--Sobic004G180700 Sobic006G050800--Sobic010G196000 Sobic006G050800--Sobic001G330300 Sobic006G050800--Sobic006G202600 Sobic006G050800--Sobic004G295100 Sobic006G050800--Sobic004G301600 Sobic002G301900 Sobic002G301900 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic010G009900 Sobic010G009900 Sobic006G050800--Sobic010G009900 Sobic009G109000--Sobic003G311800 Sobic009G109000--Sobic004G297900 Sobic001G049900 Sobic001G049900 Sobic009G109000--Sobic001G049900 Sobic008G055100 Sobic008G055100 Sobic009G109000--Sobic008G055100 Sobic003G053400 Sobic003G053400 Sobic009G109000--Sobic003G053400 Sobic003G411200 Sobic003G411200 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic009G109000--Sobic008G009400 Sobic001G430100 Sobic001G430100 Sobic009G109000--Sobic001G430100 Sobic002G124500--Sobic003G053400 Sobic002G124500--SobicK026900 Sobic002G124500--Sobic001G508532 Sobic002G425000 Sobic002G425000 Sobic002G124500--Sobic002G425000 Sobic002G124500--Sobic004G348800 Sobic010G158500 Sobic010G158500 Sobic002G124500--Sobic010G158500 Sobic003G053300 Sobic003G053300 Sobic002G124500--Sobic003G053300 Sobic010G212500 Sobic010G212500 Sobic002G124500--Sobic010G212500 Sobic002G124500--Sobic006G202600
Octagon: transcription factors


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