Gene annotation
Transcriptome id Sobic.010G196000.1
Synonym Sb10g024540, ESC, ORE7, AHL27
Functional annotation DNA binding protein, putative, expressed
UniProt C5Z674
Pfam PF03479
Panther DB PTHR31100 PTHR31100:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76500 : Predicted AT-hook DNA-binding family protein
RAP-DB (Rice) LOC_Os06g41860.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a025945 , Zm00025a009999 , Zm00025a051503
Brachypodium KQJ95304 , PNT66732 , KQK17622
Barley HORVU7Hr1G093230.4 , HORVU7Hr1G093230.2 , HORVU7Hr1G093230.3 , HORVU7Hr1G093230.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
2 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
3 Sobic.004G180700 expressed protein -
4 Sobic.006G050800 expressed protein -
5 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.002G105300 SCP-like extracellular protein, expressed -
7 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
8 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
9 Sobic.005G067500 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
10 Sobic.004G301600 integral membrane protein, putative, expressed -
11 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.002G124500 expansin precursor, putative, expressed -
13 Sobic.006G132800 expressed protein -
14 Sobic.008G009400 - -
15 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
16 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.006G009100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD40-like Beta Propeller Repeat family protein, expressed -
18 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
19 Sobic.001G508532 - -
20 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES


Gene co-expression network
sample Sobic010G196000 Sobic010G196000 Sobic004G295100 Sobic004G295100 Sobic010G196000--Sobic004G295100 Sobic006G202600 Sobic006G202600 Sobic010G196000--Sobic006G202600 Sobic004G180700 Sobic004G180700 Sobic010G196000--Sobic004G180700 Sobic006G050800 Sobic006G050800 Sobic010G196000--Sobic006G050800 Sobic003G426600 Sobic003G426600 Sobic010G196000--Sobic003G426600 Sobic002G105300 Sobic002G105300 Sobic010G196000--Sobic002G105300 Sobic001G330300 Sobic001G330300 Sobic010G196000--Sobic001G330300 Sobic009G188000 Sobic009G188000 Sobic010G196000--Sobic009G188000 Sobic005G067500 Sobic005G067500 Sobic010G196000--Sobic005G067500 Sobic004G295100--Sobic010G196000 Sobic004G297900 Sobic004G297900 Sobic004G295100--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic004G295100--Sobic008G009400 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic003G311800 Sobic003G311800 Sobic004G295100--Sobic003G311800 Sobic006G235200 Sobic006G235200 Sobic004G295100--Sobic006G235200 Sobic001G300500 Sobic001G300500 Sobic004G295100--Sobic001G300500 Sobic007G090469 Sobic007G090469 Sobic004G295100--Sobic007G090469 Sobic006G202600--Sobic004G180700 Sobic006G202600--Sobic010G196000 Sobic006G202600--Sobic004G295100 Sobic006G170600 Sobic006G170600 Sobic006G202600--Sobic006G170600 Sobic004G301600 Sobic004G301600 Sobic006G202600--Sobic004G301600 SobicK026900 SobicK026900 Sobic006G202600--SobicK026900 Sobic006G202600--Sobic006G050800 Sobic001G508532 Sobic001G508532 Sobic006G202600--Sobic001G508532 Sobic006G202600--Sobic007G090469 Sobic004G180700--Sobic004G301600 Sobic004G180700--Sobic002G105300 Sobic004G180700--Sobic006G202600 Sobic004G180700--Sobic006G050800 Sobic004G180700--Sobic006G170600 Sobic004G180700--Sobic010G196000 Sobic004G180700--Sobic004G295100 Sobic002G301900 Sobic002G301900 Sobic004G180700--Sobic002G301900 Sobic005G163800 Sobic005G163800 Sobic004G180700--Sobic005G163800 Sobic006G050800--Sobic004G180700 Sobic006G050800--Sobic010G196000 Sobic006G050800--Sobic001G330300 Sobic006G050800--Sobic006G202600 Sobic006G050800--Sobic004G295100 Sobic006G050800--Sobic004G301600 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic010G009900 Sobic010G009900 Sobic006G050800--Sobic010G009900 Sobic006G008000 Sobic006G008000 Sobic003G426600--Sobic006G008000 Sobic002G012500 Sobic002G012500 Sobic003G426600--Sobic002G012500 Sobic008G022000 Sobic008G022000 Sobic003G426600--Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic003G426600--Sobic002G012300 Sobic010G082600 Sobic010G082600 Sobic003G426600--Sobic010G082600 Sobic009G171500 Sobic009G171500 Sobic003G426600--Sobic009G171500 Sobic003G426600--Sobic010G196000 Sobic008G066200 Sobic008G066200 Sobic003G426600--Sobic008G066200 Sobic004G141100 Sobic004G141100 Sobic003G426600--Sobic004G141100 Sobic002G105300--Sobic004G180700 Sobic002G105300--Sobic006G202600 Sobic002G105300--Sobic010G196000 Sobic002G105300--Sobic004G301600 Sobic002G105300--Sobic004G295100 Sobic002G105300--Sobic007G090469 Sobic002G213600 Sobic002G213600 Sobic002G105300--Sobic002G213600 Sobic005G215400 Sobic005G215400 Sobic002G105300--Sobic005G215400 Sobic004G348800 Sobic004G348800 Sobic002G105300--Sobic004G348800 Sobic003G299300 Sobic003G299300 Sobic001G330300--Sobic003G299300 Sobic001G330300--Sobic004G295100 Sobic001G330300--Sobic008G009400 Sobic001G330300--Sobic006G050800 Sobic010G270700 Sobic010G270700 Sobic001G330300--Sobic010G270700 Sobic001G330300--Sobic004G141100 Sobic001G330300--Sobic010G196000 Sobic001G242000 Sobic001G242000 Sobic001G330300--Sobic001G242000 Sobic003G282100 Sobic003G282100 Sobic001G330300--Sobic003G282100 Sobic001G313600 Sobic001G313600 Sobic009G188000--Sobic001G313600 Sobic001G304100 Sobic001G304100 Sobic009G188000--Sobic001G304100 Sobic005G107900 Sobic005G107900 Sobic009G188000--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic009G188000--Sobic001G502400 Sobic001G238400 Sobic001G238400 Sobic009G188000--Sobic001G238400 Sobic006G235100 Sobic006G235100 Sobic009G188000--Sobic006G235100 Sobic003G084400 Sobic003G084400 Sobic009G188000--Sobic003G084400 Sobic009G188000--Sobic008G009400 Sobic001G295200 Sobic001G295200 Sobic009G188000--Sobic001G295200 Sobic010G271300 Sobic010G271300 Sobic005G067500--Sobic010G271300 Sobic005G067500--Sobic010G196000 Sobic005G067500--Sobic006G202600 Sobic005G067500--Sobic004G295100 Sobic005G067500--Sobic001G508532 Sobic005G067500--Sobic004G297900 Sobic005G067500--Sobic006G050800 Sobic009G109000 Sobic009G109000 Sobic005G067500--Sobic009G109000 Sobic002G124500 Sobic002G124500 Sobic005G067500--Sobic002G124500
Octagon: transcription factors


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