Gene annotation
Transcriptome id Sobic.006G132800.1
Synonym Sb06g021270
Functional annotation expressed protein
UniProt A0A1B6PLT9
Pfam PF04862
Panther DB PTHR31265 PTHR31265:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80240 : Protein of unknown function, DUF642
RAP-DB (Rice) LOC_Os04g41710.1 : expressed protein
MaizeGDB (Corn) Zm00025a056374 , Zm00025a010851 , Zm00025a010850 , Zm00025a010843
Brachypodium KQJ83354 , KQJ84583 , KQJ84582
Barley HORVU2Hr1G085430.2 , HORVU2Hr1G085430.3 , HORVU2Hr1G085430.1 , HORVU2Hr1G085370.5 , HORVU2Hr1G085370.4 , HORVU2Hr1G085370.6 , HORVU2Hr1G085370.3 , HORVU2Hr1G085370.2 , HORVU5Hr1G094750.4 , HORVU5Hr1G094750.2 , HORVU5Hr1G094750.3 , HORVU5Hr1G094750.1 , HORVU2Hr1G085340.8 , HORVU2Hr1G085340.2 , HORVU2Hr1G085340.3 , HORVU2Hr1G085340.4 , HORVU2Hr1G085340.5 , HORVU2Hr1G085340.6 , HORVU2Hr1G085340.7
Wheat TraesCS2B02G369500 , TraesCS2B02G369700 , TraesCS2D02G349700 , TraesCS2B02G369300 , TraesCS2A02G351200 , TraesCS2A02G351500 , TraesCS5B02G390400 , TraesCS2D02G349500 , TraesCS5A02G385400 , TraesCS2D02G349200 , TraesCS5D02G395400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.010G196000 DNA binding protein, putative, expressed -
3 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
4 Sobic.006G008000 O-methyltransferase, putative, expressed -
5 Sobic.006G050800 expressed protein -
6 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
7 Sobic.010G082600 EF hand family protein, putative, expressed -
8 Sobic.004G245700 expressed protein -
9 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
10 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
11 Sobic.006G235100 expressed protein -
12 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
13 Sobic.003G376100 4,5-DOPA dioxygenase extradiol, putative, expressed K15777: 4,5-DOPA dioxygenase extradiol
14 Sobic.008G066401 - -
15 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.008G158501 - -
18 Sobic.005G086600 O-methyltransferase, putative, expressed -
19 Sobic.008G158800 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.008G066200 expressed protein -


Gene co-expression network
sample Sobic006G132800 Sobic006G132800 Sobic003G426600 Sobic003G426600 Sobic006G132800--Sobic003G426600 Sobic010G196000 Sobic010G196000 Sobic006G132800--Sobic010G196000 Sobic001G330300 Sobic001G330300 Sobic006G132800--Sobic001G330300 Sobic006G008000 Sobic006G008000 Sobic006G132800--Sobic006G008000 Sobic006G050800 Sobic006G050800 Sobic006G132800--Sobic006G050800 Sobic002G012500 Sobic002G012500 Sobic006G132800--Sobic002G012500 Sobic010G082600 Sobic010G082600 Sobic006G132800--Sobic010G082600 Sobic004G245700 Sobic004G245700 Sobic006G132800--Sobic004G245700 Sobic004G295100 Sobic004G295100 Sobic006G132800--Sobic004G295100 Sobic003G426600--Sobic006G008000 Sobic003G426600--Sobic002G012500 Sobic008G022000 Sobic008G022000 Sobic003G426600--Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic003G426600--Sobic002G012300 Sobic003G426600--Sobic010G082600 Sobic009G171500 Sobic009G171500 Sobic003G426600--Sobic009G171500 Sobic003G426600--Sobic010G196000 Sobic008G066200 Sobic008G066200 Sobic003G426600--Sobic008G066200 Sobic004G141100 Sobic004G141100 Sobic003G426600--Sobic004G141100 Sobic010G196000--Sobic004G295100 Sobic006G202600 Sobic006G202600 Sobic010G196000--Sobic006G202600 Sobic004G180700 Sobic004G180700 Sobic010G196000--Sobic004G180700 Sobic010G196000--Sobic006G050800 Sobic010G196000--Sobic003G426600 Sobic002G105300 Sobic002G105300 Sobic010G196000--Sobic002G105300 Sobic010G196000--Sobic001G330300 Sobic009G188000 Sobic009G188000 Sobic010G196000--Sobic009G188000 Sobic005G067500 Sobic005G067500 Sobic010G196000--Sobic005G067500 Sobic003G299300 Sobic003G299300 Sobic001G330300--Sobic003G299300 Sobic001G330300--Sobic004G295100 Sobic008G009400 Sobic008G009400 Sobic001G330300--Sobic008G009400 Sobic001G330300--Sobic006G050800 Sobic010G270700 Sobic010G270700 Sobic001G330300--Sobic010G270700 Sobic001G330300--Sobic004G141100 Sobic001G330300--Sobic010G196000 Sobic001G242000 Sobic001G242000 Sobic001G330300--Sobic001G242000 Sobic003G282100 Sobic003G282100 Sobic001G330300--Sobic003G282100 Sobic006G008000--Sobic008G066200 Sobic006G008000--Sobic002G012500 Sobic003G079200 Sobic003G079200 Sobic006G008000--Sobic003G079200 Sobic005G086600 Sobic005G086600 Sobic006G008000--Sobic005G086600 Sobic006G008000--Sobic002G012300 Sobic009G145600 Sobic009G145600 Sobic006G008000--Sobic009G145600 Sobic009G145700 Sobic009G145700 Sobic006G008000--Sobic009G145700 Sobic006G008000--Sobic008G022000 Sobic008G066401 Sobic008G066401 Sobic006G008000--Sobic008G066401 Sobic006G050800--Sobic004G180700 Sobic006G050800--Sobic010G196000 Sobic006G050800--Sobic001G330300 Sobic006G050800--Sobic006G202600 Sobic006G050800--Sobic004G295100 Sobic004G301600 Sobic004G301600 Sobic006G050800--Sobic004G301600 Sobic002G301900 Sobic002G301900 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic010G009900 Sobic010G009900 Sobic006G050800--Sobic010G009900 Sobic002G012500--Sobic006G008000 Sobic001G259400 Sobic001G259400 Sobic002G012500--Sobic001G259400 Sobic002G012500--Sobic008G066200 Sobic002G012500--Sobic002G012300 Sobic002G012500--Sobic008G066401 Sobic002G012500--Sobic003G079200 Sobic002G012500--Sobic008G022000 Sobic008G158600 Sobic008G158600 Sobic002G012500--Sobic008G158600 Sobic002G012500--Sobic009G145600 Sobic010G082600--Sobic004G141100 Sobic010G082600--Sobic006G008000 Sobic006G235100 Sobic006G235100 Sobic010G082600--Sobic006G235100 Sobic009G184000 Sobic009G184000 Sobic010G082600--Sobic009G184000 Sobic010G082600--Sobic009G145700 Sobic010G082600--Sobic003G426600 Sobic002G189100 Sobic002G189100 Sobic010G082600--Sobic002G189100 Sobic010G082600--Sobic002G012500 Sobic003G043600 Sobic003G043600 Sobic010G082600--Sobic003G043600 Sobic004G245700--Sobic009G145600 Sobic004G245700--Sobic009G145700 Sobic004G245700--Sobic008G066401 Sobic003G043500 Sobic003G043500 Sobic004G245700--Sobic003G043500 Sobic009G184100 Sobic009G184100 Sobic004G245700--Sobic009G184100 Sobic009G200566 Sobic009G200566 Sobic004G245700--Sobic009G200566 Sobic009G145500 Sobic009G145500 Sobic004G245700--Sobic009G145500 Sobic006G054800 Sobic006G054800 Sobic004G245700--Sobic006G054800 Sobic001G318700 Sobic001G318700 Sobic004G245700--Sobic001G318700 Sobic004G295100--Sobic010G196000 Sobic004G297900 Sobic004G297900 Sobic004G295100--Sobic004G297900 Sobic004G295100--Sobic008G009400 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic003G311800 Sobic003G311800 Sobic004G295100--Sobic003G311800 Sobic006G235200 Sobic006G235200 Sobic004G295100--Sobic006G235200 Sobic001G300500 Sobic001G300500 Sobic004G295100--Sobic001G300500 Sobic007G090469 Sobic007G090469 Sobic004G295100--Sobic007G090469
Octagon: transcription factors


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