Gene annotation
Transcriptome id Sobic.008G158800.1
Synonym
Functional annotation LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt A0A1Z5R7W7
Pfam PF00234
Panther DB PTHR31731
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62510 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g01320.1 : LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a000125
Brachypodium -
Barley HORVU4Hr1G087780.8 , HORVU4Hr1G087780.4 , HORVU4Hr1G087780.5 , HORVU4Hr1G087780.6 , HORVU4Hr1G087780.1 , HORVU4Hr1G087780.7 , HORVU4Hr1G087780.3 , HORVU4Hr1G087770.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G200566 - -
2 Sobic.008G066200 expressed protein -
3 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
5 Sobic.006G008000 O-methyltransferase, putative, expressed -
6 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.004G169300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain-containing protein, putative, expressed -
8 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G418500 OsGrx_C6 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
10 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
12 Sobic.008G158501 - -
13 Sobic.005G177600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
14 Sobic.008G066401 - -
15 Sobic.009G184100 - -
16 Sobic.003G376100 4,5-DOPA dioxygenase extradiol, putative, expressed K15777: 4,5-DOPA dioxygenase extradiol
17 Sobic.009G171500 expressed protein -
18 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.002G389400 OsRCI2-10 - Hydrophobic protein LTI6A, expressed -
20 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic008G158800 Sobic008G158800 Sobic009G200566 Sobic009G200566 Sobic008G158800--Sobic009G200566 Sobic008G066200 Sobic008G066200 Sobic008G158800--Sobic008G066200 Sobic004G109900 Sobic004G109900 Sobic008G158800--Sobic004G109900 Sobic008G022000 Sobic008G022000 Sobic008G158800--Sobic008G022000 Sobic006G008000 Sobic006G008000 Sobic008G158800--Sobic006G008000 Sobic003G426600 Sobic003G426600 Sobic008G158800--Sobic003G426600 Sobic004G169300 Sobic004G169300 Sobic008G158800--Sobic004G169300 Sobic009G145700 Sobic009G145700 Sobic008G158800--Sobic009G145700 Sobic003G418500 Sobic003G418500 Sobic008G158800--Sobic003G418500 Sobic009G200566--Sobic009G145700 Sobic009G145600 Sobic009G145600 Sobic009G200566--Sobic009G145600 Sobic001G112200 Sobic001G112200 Sobic009G200566--Sobic001G112200 Sobic009G200566--Sobic008G158800 Sobic008G066401 Sobic008G066401 Sobic009G200566--Sobic008G066401 Sobic009G184100 Sobic009G184100 Sobic009G200566--Sobic009G184100 Sobic004G245700 Sobic004G245700 Sobic009G200566--Sobic004G245700 Sobic009G200566--Sobic008G066200 Sobic002G055700 Sobic002G055700 Sobic009G200566--Sobic002G055700 Sobic008G066200--Sobic006G008000 Sobic002G012500 Sobic002G012500 Sobic008G066200--Sobic002G012500 Sobic008G066200--Sobic009G145700 Sobic003G079200 Sobic003G079200 Sobic008G066200--Sobic003G079200 Sobic008G066200--Sobic009G145600 Sobic008G066200--Sobic008G066401 Sobic008G066200--Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic008G066200--Sobic002G012300 Sobic001G188800 Sobic001G188800 Sobic008G066200--Sobic001G188800 Sobic004G109900--Sobic008G066200 Sobic004G109900--Sobic001G112200 Sobic010G225251 Sobic010G225251 Sobic004G109900--Sobic010G225251 Sobic009G184000 Sobic009G184000 Sobic004G109900--Sobic009G184000 Sobic010G156500 Sobic010G156500 Sobic004G109900--Sobic010G156500 Sobic006G235100 Sobic006G235100 Sobic004G109900--Sobic006G235100 Sobic001G502400 Sobic001G502400 Sobic004G109900--Sobic001G502400 Sobic002G389400 Sobic002G389400 Sobic004G109900--Sobic002G389400 Sobic004G109900--Sobic009G145700 Sobic008G022000--Sobic002G012300 Sobic008G022000--Sobic006G008000 Sobic008G022000--Sobic008G066200 Sobic008G022000--Sobic002G012500 Sobic008G158501 Sobic008G158501 Sobic008G022000--Sobic008G158501 Sobic008G022000--Sobic003G079200 Sobic008G158600 Sobic008G158600 Sobic008G022000--Sobic008G158600 Sobic008G036800 Sobic008G036800 Sobic008G022000--Sobic008G036800 Sobic008G022000--Sobic003G426600 Sobic006G008000--Sobic008G066200 Sobic006G008000--Sobic002G012500 Sobic006G008000--Sobic003G079200 Sobic005G086600 Sobic005G086600 Sobic006G008000--Sobic005G086600 Sobic006G008000--Sobic002G012300 Sobic006G008000--Sobic009G145600 Sobic006G008000--Sobic009G145700 Sobic006G008000--Sobic008G022000 Sobic006G008000--Sobic008G066401 Sobic003G426600--Sobic006G008000 Sobic003G426600--Sobic002G012500 Sobic003G426600--Sobic008G022000 Sobic003G426600--Sobic002G012300 Sobic010G082600 Sobic010G082600 Sobic003G426600--Sobic010G082600 Sobic009G171500 Sobic009G171500 Sobic003G426600--Sobic009G171500 Sobic010G196000 Sobic010G196000 Sobic003G426600--Sobic010G196000 Sobic003G426600--Sobic008G066200 Sobic004G141100 Sobic004G141100 Sobic003G426600--Sobic004G141100 Sobic004G169300--Sobic008G066200 Sobic004G169300--Sobic009G200566 Sobic008G139600 Sobic008G139600 Sobic004G169300--Sobic008G139600 Sobic010G166500 Sobic010G166500 Sobic004G169300--Sobic010G166500 Sobic004G169300--Sobic008G158800 Sobic006G101300 Sobic006G101300 Sobic004G169300--Sobic006G101300 Sobic004G169300--Sobic009G145700 Sobic001G280800 Sobic001G280800 Sobic004G169300--Sobic001G280800 Sobic002G323300 Sobic002G323300 Sobic004G169300--Sobic002G323300 Sobic009G145700--Sobic009G145600 Sobic009G145700--Sobic008G066401 Sobic009G145700--Sobic008G066200 Sobic009G145700--Sobic006G008000 Sobic009G145700--Sobic001G112200 Sobic003G043600 Sobic003G043600 Sobic009G145700--Sobic003G043600 Sobic003G043500 Sobic003G043500 Sobic009G145700--Sobic003G043500 Sobic009G145700--Sobic009G184000 Sobic009G145700--Sobic003G079200 Sobic002G042000 Sobic002G042000 Sobic003G418500--Sobic002G042000 Sobic003G418500--Sobic006G101300 Sobic005G177600 Sobic005G177600 Sobic003G418500--Sobic005G177600 Sobic003G418500--Sobic008G158800 Sobic006G234900 Sobic006G234900 Sobic003G418500--Sobic006G234900 Sobic003G418500--Sobic004G169300 Sobic003G364300 Sobic003G364300 Sobic003G418500--Sobic003G364300 Sobic003G418500--Sobic010G156500 Sobic002G010900 Sobic002G010900 Sobic003G418500--Sobic002G010900
Octagon: transcription factors


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