Gene annotation
Transcriptome id Sobic.009G171500.1
Synonym Sb09g023260
Functional annotation expressed protein
UniProt C5YZQ5
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30230 : -
RAP-DB (Rice) LOC_Os05g39710.1 : expressed protein
MaizeGDB (Corn) Zm00025a039746 , Zm00025a043966
Brachypodium KQK05784 , KQK10386
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.002G012500 DUF538 domain containing protein, putative, expressed -
3 Sobic.006G008000 O-methyltransferase, putative, expressed -
4 Sobic.002G294000 purine permease, putative, expressed -
5 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
6 Sobic.006G235100 expressed protein -
7 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
8 Sobic.008G066200 expressed protein -
9 Sobic.010G082600 EF hand family protein, putative, expressed -
10 Sobic.006G141700 OsGrx_C2.2 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
11 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.003G376100 4,5-DOPA dioxygenase extradiol, putative, expressed K15777: 4,5-DOPA dioxygenase extradiol
13 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
14 Sobic.010G196000 DNA binding protein, putative, expressed -
15 Sobic.008G066401 - -
16 Sobic.006G007900 SbOMT3 is involved in the biosynthesis of the allelochemical sorgoleone. Highly expressed in rrot hairs.(PubMedID : 17998204)@"Catalyse the A ringspecific 3,5-bis-O-methylation of resveratrol, yielding pterostilbene, preference for alkylresorcinolic-type substrates"(PubMedID : 21902799)@Produced pinostilbene as the major product besides a very small amount of pterostilbene from resveratrol in E.coli.(PubMedID : 24267561)@"Methylation activity in the A ring hydroxyl group against resveratrol as well as 3,5-dihydroxy-4'-methoxystilbene"(PubMedID : 25033820)@Catalytic activity for transferring one methyl group to the hydroxyl group at the 3- or 5-position in resveratrol in E.coli. Weak activity for methylation of both hydroxyl groups to generate pterostilbene in E.coli.(PubMedID : 25715927)@O-methyltransferase, putative, expressed -
17 Sobic.008G158800 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
19 Sobic.001G259400 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
20 Sobic.009G145600 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic009G171500 Sobic009G171500 Sobic003G426600 Sobic003G426600 Sobic009G171500--Sobic003G426600 Sobic002G012500 Sobic002G012500 Sobic009G171500--Sobic002G012500 Sobic006G008000 Sobic006G008000 Sobic009G171500--Sobic006G008000 Sobic002G294000 Sobic002G294000 Sobic009G171500--Sobic002G294000 Sobic008G022000 Sobic008G022000 Sobic009G171500--Sobic008G022000 Sobic006G235100 Sobic006G235100 Sobic009G171500--Sobic006G235100 Sobic004G141100 Sobic004G141100 Sobic009G171500--Sobic004G141100 Sobic008G066200 Sobic008G066200 Sobic009G171500--Sobic008G066200 Sobic010G082600 Sobic010G082600 Sobic009G171500--Sobic010G082600 Sobic003G426600--Sobic006G008000 Sobic003G426600--Sobic002G012500 Sobic003G426600--Sobic008G022000 Sobic002G012300 Sobic002G012300 Sobic003G426600--Sobic002G012300 Sobic003G426600--Sobic010G082600 Sobic003G426600--Sobic009G171500 Sobic010G196000 Sobic010G196000 Sobic003G426600--Sobic010G196000 Sobic003G426600--Sobic008G066200 Sobic003G426600--Sobic004G141100 Sobic002G012500--Sobic006G008000 Sobic001G259400 Sobic001G259400 Sobic002G012500--Sobic001G259400 Sobic002G012500--Sobic008G066200 Sobic002G012500--Sobic002G012300 Sobic008G066401 Sobic008G066401 Sobic002G012500--Sobic008G066401 Sobic003G079200 Sobic003G079200 Sobic002G012500--Sobic003G079200 Sobic002G012500--Sobic008G022000 Sobic008G158600 Sobic008G158600 Sobic002G012500--Sobic008G158600 Sobic009G145600 Sobic009G145600 Sobic002G012500--Sobic009G145600 Sobic006G008000--Sobic008G066200 Sobic006G008000--Sobic002G012500 Sobic006G008000--Sobic003G079200 Sobic005G086600 Sobic005G086600 Sobic006G008000--Sobic005G086600 Sobic006G008000--Sobic002G012300 Sobic006G008000--Sobic009G145600 Sobic009G145700 Sobic009G145700 Sobic006G008000--Sobic009G145700 Sobic006G008000--Sobic008G022000 Sobic006G008000--Sobic008G066401 Sobic002G294000--Sobic006G008000 Sobic002G294000--Sobic002G012500 Sobic002G294000--Sobic008G022000 Sobic002G294000--Sobic008G066200 Sobic002G294000--Sobic002G012300 Sobic006G141700 Sobic006G141700 Sobic002G294000--Sobic006G141700 Sobic002G294000--Sobic004G141100 Sobic002G294000--Sobic009G145600 Sobic002G294000--Sobic003G079200 Sobic008G022000--Sobic002G012300 Sobic008G022000--Sobic006G008000 Sobic008G022000--Sobic008G066200 Sobic008G022000--Sobic002G012500 Sobic008G158501 Sobic008G158501 Sobic008G022000--Sobic008G158501 Sobic008G022000--Sobic003G079200 Sobic008G022000--Sobic008G158600 Sobic008G036800 Sobic008G036800 Sobic008G022000--Sobic008G036800 Sobic008G022000--Sobic003G426600 Sobic001G502400 Sobic001G502400 Sobic006G235100--Sobic001G502400 Sobic006G007900 Sobic006G007900 Sobic006G235100--Sobic006G007900 Sobic001G313600 Sobic001G313600 Sobic006G235100--Sobic001G313600 Sobic009G184000 Sobic009G184000 Sobic006G235100--Sobic009G184000 Sobic005G107900 Sobic005G107900 Sobic006G235100--Sobic005G107900 Sobic003G442100 Sobic003G442100 Sobic006G235100--Sobic003G442100 Sobic006G235100--Sobic004G141100 Sobic006G075400 Sobic006G075400 Sobic006G235100--Sobic006G075400 Sobic003G432700 Sobic003G432700 Sobic006G235100--Sobic003G432700 Sobic002G351300 Sobic002G351300 Sobic004G141100--Sobic002G351300 Sobic004G141100--Sobic006G235100 Sobic004G141100--Sobic010G082600 Sobic007G017500 Sobic007G017500 Sobic004G141100--Sobic007G017500 Sobic004G141100--Sobic006G075400 Sobic008G009400 Sobic008G009400 Sobic004G141100--Sobic008G009400 Sobic006G054800 Sobic006G054800 Sobic004G141100--Sobic006G054800 Sobic004G141100--Sobic006G008000 Sobic004G141100--Sobic008G066401 Sobic008G066200--Sobic006G008000 Sobic008G066200--Sobic002G012500 Sobic008G066200--Sobic009G145700 Sobic008G066200--Sobic003G079200 Sobic008G066200--Sobic009G145600 Sobic008G066200--Sobic008G066401 Sobic008G066200--Sobic008G022000 Sobic008G066200--Sobic002G012300 Sobic001G188800 Sobic001G188800 Sobic008G066200--Sobic001G188800 Sobic010G082600--Sobic004G141100 Sobic010G082600--Sobic006G008000 Sobic010G082600--Sobic006G235100 Sobic010G082600--Sobic009G184000 Sobic010G082600--Sobic009G145700 Sobic010G082600--Sobic003G426600 Sobic002G189100 Sobic002G189100 Sobic010G082600--Sobic002G189100 Sobic010G082600--Sobic002G012500 Sobic003G043600 Sobic003G043600 Sobic010G082600--Sobic003G043600
Octagon: transcription factors


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