Gene annotation
| Transcriptome id | Sobic.001G280800.1 |
|---|---|
| Synonym | GSTU18, GST29, Sb01g027620, ATGSTU18 |
| Functional annotation | glutathione S-transferase, putative, expressed |
| UniProt | C5WQK9 |
| Pfam | PF13417 |
| Panther DB | PTHR11260 PTHR11260:SF243 |
| NCBI CDD | KOG0406; Glutathione S-transferase |
| KEGG Orthology | K00799; GST, glutathione S-transferase |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT1G10360 : glutathione S-transferase TAU 18 |
|---|---|
| RAP-DB (Rice) | LOC_Os10g38670.1 : glutathione S-transferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a053625 |
| Brachypodium | KQJ97544 , KQJ97554 , KQK11525 |
| Barley | HORVU1Hr1G001560.6 , HORVU1Hr1G001560.5 , HORVU1Hr1G001560.4 , HORVU1Hr1G001560.3 , HORVU1Hr1G001560.2 , HORVU1Hr1G001560.1 |
| Wheat | TraesCS3B02G409200 , TraesCS3D02G485700 , TraesCS3B02G539800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.010G198600 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 2 | Sobic.004G336500 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed | K14484: auxin-responsive protein IAA |
| 3 | Sobic.001G279300 | Up-reguralion under heat(PubMedID : 24916767)@VQ domain containing protein, putative, expressed | - |
| 4 | Sobic.009G069800 | Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed | K00844: hexokinase |
| 5 | Sobic.004G004400 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed | K00016: LDH, L-lactate dehydrogenase |
| 6 | Sobic.010G225251 | - | - |
| 7 | Sobic.009G145700 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 8 | Sobic.008G066401 | - | - |
| 9 | Sobic.004G109900 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 10 | Sobic.007G008100 | invertase/pectin methylesterase inhibitor family protein, putative, expressed | - |
| 11 | Sobic.006G054800 | "glycerophosphodiester phosphodiesterase, up-regulated under drought stress, involved in the final step of the choline biosynthesis pathway, mapped into a QTL involved in stay green (QSTG1_6) "(PubMedID : 24655390)@Glycerophosphodiester phosphodiesterase ( At)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed | - |
| 12 | Sobic.001G112200 | LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 13 | Sobic.007G169700 | inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed | K01240: uridine nucleosidase |
| 14 | Sobic.002G042000 | gibberellin receptor GID1L2, putative, expressed | - |
| 15 | Sobic.004G169300 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain-containing protein, putative, expressed | - |
| 16 | Sobic.001G169500 | - | - |
| 17 | Sobic.008G139600 | lectin-like receptor kinase, putative, expressed | - |
| 18 | Sobic.003G345600 | expressed protein | - |
| 19 | Sobic.009G200566 | - | - |
| 20 | Sobic.009G184000 | ICE-like protease p20 domain containing protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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