Gene annotation
Transcriptome id Sobic.010G225251.1
Synonym -
Functional annotation -
UniProt A0A1W0VUA1
Pfam PF00304
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
3 Sobic.001G310600 expressed protein -
4 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase
5 Sobic.001G138600 VQ domain containing protein, putative, expressed -
6 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
7 Sobic.002G389400 OsRCI2-10 - Hydrophobic protein LTI6A, expressed -
8 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
10 Sobic.001G259900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
11 Sobic.001G279500 VQ domain containing protein, putative, expressed -
12 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
13 Sobic.009G145700 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.008G044300 U-box domain-containing protein, putative, expressed -
15 Sobic.006G235100 expressed protein -
16 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G186100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@patatin, putative, expressed -
19 Sobic.006G190100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
20 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -


Gene co-expression network
sample Sobic010G225251 Sobic010G225251 Sobic001G112200 Sobic001G112200 Sobic010G225251--Sobic001G112200 Sobic004G336500 Sobic004G336500 Sobic010G225251--Sobic004G336500 Sobic001G310600 Sobic001G310600 Sobic010G225251--Sobic001G310600 Sobic009G069800 Sobic009G069800 Sobic010G225251--Sobic009G069800 Sobic001G138600 Sobic001G138600 Sobic010G225251--Sobic001G138600 Sobic009G184000 Sobic009G184000 Sobic010G225251--Sobic009G184000 Sobic002G389400 Sobic002G389400 Sobic010G225251--Sobic002G389400 Sobic004G109900 Sobic004G109900 Sobic010G225251--Sobic004G109900 Sobic007G169700 Sobic007G169700 Sobic010G225251--Sobic007G169700 Sobic001G112200--Sobic009G184000 Sobic001G318700 Sobic001G318700 Sobic001G112200--Sobic001G318700 Sobic001G112200--Sobic001G138600 Sobic003G369100 Sobic003G369100 Sobic001G112200--Sobic003G369100 Sobic001G112200--Sobic007G169700 Sobic004G237800 Sobic004G237800 Sobic001G112200--Sobic004G237800 Sobic009G145700 Sobic009G145700 Sobic001G112200--Sobic009G145700 Sobic007G074000 Sobic007G074000 Sobic001G112200--Sobic007G074000 Sobic001G112200--Sobic001G310600 Sobic004G336500--Sobic009G069800 Sobic003G367200 Sobic003G367200 Sobic004G336500--Sobic003G367200 Sobic001G169500 Sobic001G169500 Sobic004G336500--Sobic001G169500 Sobic007G008100 Sobic007G008100 Sobic004G336500--Sobic007G008100 Sobic004G336500--Sobic001G112200 Sobic004G336500--Sobic010G225251 Sobic003G382800 Sobic003G382800 Sobic004G336500--Sobic003G382800 Sobic001G280800 Sobic001G280800 Sobic004G336500--Sobic001G280800 Sobic004G336500--Sobic001G138600 Sobic003G442100 Sobic003G442100 Sobic001G310600--Sobic003G442100 Sobic003G043600 Sobic003G043600 Sobic001G310600--Sobic003G043600 Sobic001G310600--Sobic001G112200 Sobic006G075400 Sobic006G075400 Sobic001G310600--Sobic006G075400 Sobic001G502400 Sobic001G502400 Sobic001G310600--Sobic001G502400 Sobic001G310600--Sobic001G318700 Sobic002G336600 Sobic002G336600 Sobic001G310600--Sobic002G336600 Sobic001G310600--Sobic009G184000 Sobic001G079300 Sobic001G079300 Sobic001G310600--Sobic001G079300 Sobic009G069800--Sobic004G336500 Sobic009G069800--Sobic007G008100 Sobic009G069800--Sobic010G225251 Sobic002G042000 Sobic002G042000 Sobic009G069800--Sobic002G042000 Sobic009G069800--Sobic001G280800 Sobic001G477600 Sobic001G477600 Sobic009G069800--Sobic001G477600 Sobic004G236100 Sobic004G236100 Sobic009G069800--Sobic004G236100 Sobic010G166500 Sobic010G166500 Sobic009G069800--Sobic010G166500 Sobic003G041600 Sobic003G041600 Sobic009G069800--Sobic003G041600 Sobic001G138600--Sobic003G382800 Sobic001G138600--Sobic001G112200 Sobic004G141200 Sobic004G141200 Sobic001G138600--Sobic004G141200 Sobic001G138600--Sobic003G369100 Sobic001G138600--Sobic009G184000 Sobic001G138600--Sobic001G079300 Sobic001G138600--Sobic007G074000 Sobic001G459800 Sobic001G459800 Sobic001G138600--Sobic001G459800 Sobic001G391500 Sobic001G391500 Sobic001G138600--Sobic001G391500 Sobic009G184000--Sobic001G112200 Sobic009G184000--Sobic007G169700 Sobic006G235100 Sobic006G235100 Sobic009G184000--Sobic006G235100 Sobic009G184000--Sobic001G502400 Sobic003G228900 Sobic003G228900 Sobic009G184000--Sobic003G228900 Sobic003G432700 Sobic003G432700 Sobic009G184000--Sobic003G432700 Sobic009G184000--Sobic001G138600 Sobic008G066401 Sobic008G066401 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100 Sobic002G389400--Sobic001G112200 Sobic002G389400--Sobic009G184000 Sobic004G171400 Sobic004G171400 Sobic002G389400--Sobic004G171400 Sobic002G389400--Sobic003G367200 Sobic004G321300 Sobic004G321300 Sobic002G389400--Sobic004G321300 Sobic002G389400--Sobic010G225251 Sobic002G389400--Sobic004G336500 Sobic002G389400--Sobic010G166500 Sobic002G389400--Sobic001G138600 Sobic008G066200 Sobic008G066200 Sobic004G109900--Sobic008G066200 Sobic004G109900--Sobic001G112200 Sobic004G109900--Sobic010G225251 Sobic004G109900--Sobic009G184000 Sobic010G156500 Sobic010G156500 Sobic004G109900--Sobic010G156500 Sobic004G109900--Sobic006G235100 Sobic004G109900--Sobic001G502400 Sobic004G109900--Sobic002G389400 Sobic004G109900--Sobic009G145700 Sobic007G169700--Sobic009G184000 Sobic007G169700--Sobic001G112200 Sobic007G169700--Sobic008G066401 Sobic007G169700--Sobic003G432700 Sobic007G169700--Sobic009G145700 Sobic007G169700--Sobic001G138600 Sobic007G169700--Sobic001G318700 Sobic003G043500 Sobic003G043500 Sobic007G169700--Sobic003G043500 Sobic007G169700--Sobic006G235100
Octagon: transcription factors


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