Gene annotation
Transcriptome id Sobic.003G345600.1
Synonym Sb03g038930
Functional annotation expressed protein
UniProt C5XP09
Pfam -
Panther DB PTHR33674 PTHR33674:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08330 : -
RAP-DB (Rice) LOC_Os01g61680.1 : expressed protein
MaizeGDB (Corn) Zm00025a039716
Brachypodium PNT73136
Barley -
Wheat TraesCS3B02G384700 , TraesCS3D02G346100 , TraesCS3A02G352100
Populus -


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cDNA sequences
Sobic.003G345600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
4 Sobic.006G162100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
5 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
6 Sobic.005G070200 OsWAK91 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.004G004400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00016: LDH, L-lactate dehydrogenase
8 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase
9 Sobic.003G138300 expressed protein -
10 Sobic.004G169300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain-containing protein, putative, expressed -
11 Sobic.004G022900 expressed protein -
12 Sobic.002G314700 receptor-like protein kinase, putative, expressed -
13 Sobic.001G279300 Up-reguralion under heat(PubMedID : 24916767)@VQ domain containing protein, putative, expressed -
14 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
16 Sobic.001G487600 Lectin protein kinase family protein("PubMedID : 26759170,PubMedID : 24597475")@protein kinase domain containing protein, expressed -
17 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G215601 - -
19 Sobic.002G040900 VQ domain containing protein, putative, expressed -
20 Sobic.004G148100 Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic003G345600 Sobic003G345600 Sobic001G280800 Sobic001G280800 Sobic003G345600--Sobic001G280800 Sobic004G236100 Sobic004G236100 Sobic003G345600--Sobic004G236100 Sobic002G323300 Sobic002G323300 Sobic003G345600--Sobic002G323300 Sobic006G162100 Sobic006G162100 Sobic003G345600--Sobic006G162100 Sobic004G336500 Sobic004G336500 Sobic003G345600--Sobic004G336500 Sobic005G070200 Sobic005G070200 Sobic003G345600--Sobic005G070200 Sobic004G004400 Sobic004G004400 Sobic003G345600--Sobic004G004400 Sobic009G069800 Sobic009G069800 Sobic003G345600--Sobic009G069800 Sobic003G138300 Sobic003G138300 Sobic003G345600--Sobic003G138300 Sobic010G198600 Sobic010G198600 Sobic001G280800--Sobic010G198600 Sobic001G280800--Sobic004G336500 Sobic001G279300 Sobic001G279300 Sobic001G280800--Sobic001G279300 Sobic001G280800--Sobic009G069800 Sobic001G280800--Sobic004G004400 Sobic010G225251 Sobic010G225251 Sobic001G280800--Sobic010G225251 Sobic009G145700 Sobic009G145700 Sobic001G280800--Sobic009G145700 Sobic008G066401 Sobic008G066401 Sobic001G280800--Sobic008G066401 Sobic004G109900 Sobic004G109900 Sobic001G280800--Sobic004G109900 Sobic004G236100--Sobic004G336500 Sobic004G236100--Sobic009G069800 Sobic007G008100 Sobic007G008100 Sobic004G236100--Sobic007G008100 Sobic001G054500 Sobic001G054500 Sobic004G236100--Sobic001G054500 Sobic002G042000 Sobic002G042000 Sobic004G236100--Sobic002G042000 Sobic001G525200 Sobic001G525200 Sobic004G236100--Sobic001G525200 Sobic010G032100 Sobic010G032100 Sobic004G236100--Sobic010G032100 Sobic009G229000 Sobic009G229000 Sobic004G236100--Sobic009G229000 Sobic001G354200 Sobic001G354200 Sobic004G236100--Sobic001G354200 Sobic002G323300--Sobic009G069800 Sobic002G323300--Sobic004G336500 Sobic001G115300 Sobic001G115300 Sobic002G323300--Sobic001G115300 Sobic002G389400 Sobic002G389400 Sobic002G323300--Sobic002G389400 Sobic004G169300 Sobic004G169300 Sobic002G323300--Sobic004G169300 Sobic010G166500 Sobic010G166500 Sobic002G323300--Sobic010G166500 Sobic003G367200 Sobic003G367200 Sobic002G323300--Sobic003G367200 Sobic002G323300--Sobic001G280800 Sobic004G321300 Sobic004G321300 Sobic002G323300--Sobic004G321300 Sobic004G148100 Sobic004G148100 Sobic006G162100--Sobic004G148100 Sobic007G215600 Sobic007G215600 Sobic006G162100--Sobic007G215600 Sobic002G040900 Sobic002G040900 Sobic006G162100--Sobic002G040900 Sobic004G189500 Sobic004G189500 Sobic006G162100--Sobic004G189500 Sobic006G039100 Sobic006G039100 Sobic006G162100--Sobic006G039100 Sobic002G055700 Sobic002G055700 Sobic006G162100--Sobic002G055700 Sobic005G177600 Sobic005G177600 Sobic006G162100--Sobic005G177600 Sobic006G113500 Sobic006G113500 Sobic006G162100--Sobic006G113500 Sobic001G325400 Sobic001G325400 Sobic006G162100--Sobic001G325400 Sobic004G336500--Sobic009G069800 Sobic004G336500--Sobic003G367200 Sobic001G169500 Sobic001G169500 Sobic004G336500--Sobic001G169500 Sobic004G336500--Sobic007G008100 Sobic001G112200 Sobic001G112200 Sobic004G336500--Sobic001G112200 Sobic004G336500--Sobic010G225251 Sobic003G382800 Sobic003G382800 Sobic004G336500--Sobic003G382800 Sobic004G336500--Sobic001G280800 Sobic001G138600 Sobic001G138600 Sobic004G336500--Sobic001G138600 Sobic005G069800 Sobic005G069800 Sobic005G070200--Sobic005G069800 Sobic005G069700 Sobic005G069700 Sobic005G070200--Sobic005G069700 Sobic009G144800 Sobic009G144800 Sobic005G070200--Sobic009G144800 Sobic004G022900 Sobic004G022900 Sobic005G070200--Sobic004G022900 Sobic005G070200--Sobic003G345600 Sobic001G487600 Sobic001G487600 Sobic005G070200--Sobic001G487600 Sobic009G144900 Sobic009G144900 Sobic005G070200--Sobic009G144900 Sobic005G070200--Sobic005G177600 Sobic005G070200--Sobic004G169300 Sobic004G004400--Sobic001G280800 Sobic004G004400--Sobic010G198600 Sobic006G190100 Sobic006G190100 Sobic004G004400--Sobic006G190100 Sobic003G142300 Sobic003G142300 Sobic004G004400--Sobic003G142300 Sobic009G148100 Sobic009G148100 Sobic004G004400--Sobic009G148100 Sobic004G004400--Sobic001G279300 Sobic002G261200 Sobic002G261200 Sobic004G004400--Sobic002G261200 Sobic006G054800 Sobic006G054800 Sobic004G004400--Sobic006G054800 Sobic003G362700 Sobic003G362700 Sobic004G004400--Sobic003G362700 Sobic009G069800--Sobic004G336500 Sobic009G069800--Sobic007G008100 Sobic009G069800--Sobic010G225251 Sobic009G069800--Sobic002G042000 Sobic009G069800--Sobic001G280800 Sobic001G477600 Sobic001G477600 Sobic009G069800--Sobic001G477600 Sobic009G069800--Sobic004G236100 Sobic009G069800--Sobic010G166500 Sobic003G041600 Sobic003G041600 Sobic009G069800--Sobic003G041600 Sobic006G032700 Sobic006G032700 Sobic003G138300--Sobic006G032700 Sobic001G309600 Sobic001G309600 Sobic003G138300--Sobic001G309600 Sobic002G215300 Sobic002G215300 Sobic003G138300--Sobic002G215300 Sobic003G138300--Sobic003G367200 Sobic003G138300--Sobic010G032100 Sobic001G397200 Sobic001G397200 Sobic003G138300--Sobic001G397200 Sobic001G481500 Sobic001G481500 Sobic003G138300--Sobic001G481500 Sobic010G031100 Sobic010G031100 Sobic003G138300--Sobic010G031100 Sobic001G149800 Sobic001G149800 Sobic003G138300--Sobic001G149800
Octagon: transcription factors


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