Gene annotation
Transcriptome id Sobic.004G236100.1
Synonym LAC14
Functional annotation laccase precursor protein, putative, expressed
UniProt A0A194YR96
Pfam PF00394 PF07731 PF07732
Panther DB PTHR11709 PTHR11709:SF118
NCBI CDD -
KEGG Orthology K05909; laccase
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT5G09360 : laccase 14
RAP-DB (Rice) LOC_Os02g51440.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a022105 , Zm00025a033185
Brachypodium -
Barley HORVU6Hr1G075380.3 , HORVU6Hr1G075380.2 , HORVU6Hr1G075380.1 , HORVU6Hr1G075380.4 , HORVU7Hr1G083090.5 , HORVU7Hr1G083090.3 , HORVU7Hr1G083090.1 , HORVU7Hr1G083090.2 , HORVU7Hr1G083090.4
Wheat TraesCS7D02G176300 , TraesCS6D02G284100 , TraesCS7B02G079900 , TraesCS7B02G080100 , TraesCS7B02G080100 , TraesCS6D02G284200 , TraesCS6A02G305000 , TraesCS7D02G176500 , TraesCS7A02G337400 , TraesCS6A02G304900 , TraesCS7A02G175000 , TraesCS7D02G176400 , TraesCS7B02G079800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
2 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase
3 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
4 Sobic.001G054500 expressed protein -
5 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.001G525200 expressed protein -
7 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
8 Sobic.009G229000 expressed protein -
9 Sobic.001G354200 O-methyltransferase, putative, expressed -
10 Sobic.004G067600 expressed protein -
11 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
13 Sobic.003G345600 expressed protein -
14 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
15 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
16 Sobic.009G154200 MYB family transcription factor, putative, expressed -
17 Sobic.003G138300 expressed protein -
18 Sobic.003G145400 expressed protein -
19 Sobic.002G040900 VQ domain containing protein, putative, expressed -
20 Sobic.007G032700 - -


Gene co-expression network
sample Sobic004G236100 Sobic004G236100 Sobic004G336500 Sobic004G336500 Sobic004G236100--Sobic004G336500 Sobic009G069800 Sobic009G069800 Sobic004G236100--Sobic009G069800 Sobic007G008100 Sobic007G008100 Sobic004G236100--Sobic007G008100 Sobic001G054500 Sobic001G054500 Sobic004G236100--Sobic001G054500 Sobic002G042000 Sobic002G042000 Sobic004G236100--Sobic002G042000 Sobic001G525200 Sobic001G525200 Sobic004G236100--Sobic001G525200 Sobic010G032100 Sobic010G032100 Sobic004G236100--Sobic010G032100 Sobic009G229000 Sobic009G229000 Sobic004G236100--Sobic009G229000 Sobic001G354200 Sobic001G354200 Sobic004G236100--Sobic001G354200 Sobic004G336500--Sobic009G069800 Sobic003G367200 Sobic003G367200 Sobic004G336500--Sobic003G367200 Sobic001G169500 Sobic001G169500 Sobic004G336500--Sobic001G169500 Sobic004G336500--Sobic007G008100 Sobic001G112200 Sobic001G112200 Sobic004G336500--Sobic001G112200 Sobic010G225251 Sobic010G225251 Sobic004G336500--Sobic010G225251 Sobic003G382800 Sobic003G382800 Sobic004G336500--Sobic003G382800 Sobic001G280800 Sobic001G280800 Sobic004G336500--Sobic001G280800 Sobic001G138600 Sobic001G138600 Sobic004G336500--Sobic001G138600 Sobic009G069800--Sobic004G336500 Sobic009G069800--Sobic007G008100 Sobic009G069800--Sobic010G225251 Sobic009G069800--Sobic002G042000 Sobic009G069800--Sobic001G280800 Sobic001G477600 Sobic001G477600 Sobic009G069800--Sobic001G477600 Sobic009G069800--Sobic004G236100 Sobic010G166500 Sobic010G166500 Sobic009G069800--Sobic010G166500 Sobic003G041600 Sobic003G041600 Sobic009G069800--Sobic003G041600 Sobic007G008100--Sobic002G042000 Sobic007G008100--Sobic001G054500 Sobic007G008100--Sobic004G336500 Sobic003G364300 Sobic003G364300 Sobic007G008100--Sobic003G364300 Sobic007G008000 Sobic007G008000 Sobic007G008100--Sobic007G008000 Sobic007G008100--Sobic009G069800 Sobic009G154200 Sobic009G154200 Sobic007G008100--Sobic009G154200 Sobic008G139600 Sobic008G139600 Sobic007G008100--Sobic008G139600 Sobic002G040900 Sobic002G040900 Sobic007G008100--Sobic002G040900 Sobic001G054500--Sobic002G042000 Sobic001G054500--Sobic007G008100 Sobic001G054500--Sobic002G040900 Sobic001G256200 Sobic001G256200 Sobic001G054500--Sobic001G256200 Sobic001G054500--Sobic003G364300 Sobic004G148100 Sobic004G148100 Sobic001G054500--Sobic004G148100 Sobic006G113500 Sobic006G113500 Sobic001G054500--Sobic006G113500 Sobic001G054500--Sobic007G008000 Sobic009G009700 Sobic009G009700 Sobic001G054500--Sobic009G009700 Sobic002G042000--Sobic007G008100 Sobic002G042000--Sobic001G054500 Sobic002G042000--Sobic002G040900 Sobic002G042000--Sobic003G364300 Sobic002G042000--Sobic009G069800 Sobic002G042000--Sobic001G256200 Sobic006G101300 Sobic006G101300 Sobic002G042000--Sobic006G101300 Sobic002G042000--Sobic004G148100 Sobic002G042000--Sobic007G008000 Sobic003G145400 Sobic003G145400 Sobic001G525200--Sobic003G145400 Sobic002G104200 Sobic002G104200 Sobic001G525200--Sobic002G104200 Sobic001G525200--Sobic004G236100 Sobic001G525200--Sobic009G069800 Sobic008G162700 Sobic008G162700 Sobic001G525200--Sobic008G162700 Sobic001G525200--Sobic002G042000 Sobic010G031100 Sobic010G031100 Sobic001G525200--Sobic010G031100 Sobic001G525200--Sobic004G336500 Sobic004G067600 Sobic004G067600 Sobic001G525200--Sobic004G067600 Sobic001G397200 Sobic001G397200 Sobic010G032100--Sobic001G397200 Sobic002G068600 Sobic002G068600 Sobic010G032100--Sobic002G068600 Sobic010G032100--Sobic010G031100 Sobic002G261200 Sobic002G261200 Sobic010G032100--Sobic002G261200 Sobic001G149800 Sobic001G149800 Sobic010G032100--Sobic001G149800 Sobic001G309600 Sobic001G309600 Sobic010G032100--Sobic001G309600 Sobic006G032700 Sobic006G032700 Sobic010G032100--Sobic006G032700 Sobic003G394400 Sobic003G394400 Sobic010G032100--Sobic003G394400 Sobic001G481500 Sobic001G481500 Sobic010G032100--Sobic001G481500 Sobic004G166700 Sobic004G166700 Sobic009G229000--Sobic004G166700 Sobic006G092500 Sobic006G092500 Sobic009G229000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic009G229000--Sobic001G139100 Sobic009G035200 Sobic009G035200 Sobic009G229000--Sobic009G035200 Sobic005G051200 Sobic005G051200 Sobic009G229000--Sobic005G051200 Sobic003G345100 Sobic003G345100 Sobic009G229000--Sobic003G345100 Sobic009G229000--Sobic001G169500 Sobic010G259600 Sobic010G259600 Sobic009G229000--Sobic010G259600 Sobic005G063100 Sobic005G063100 Sobic009G229000--Sobic005G063100 Sobic001G354200--Sobic006G032700 Sobic001G354200--Sobic001G397200 Sobic010G275100 Sobic010G275100 Sobic001G354200--Sobic010G275100 Sobic001G354200--Sobic010G032100 Sobic003G138300 Sobic003G138300 Sobic001G354200--Sobic003G138300 Sobic001G354200--Sobic001G481500 Sobic001G354200--Sobic001G309600 Sobic004G245500 Sobic004G245500 Sobic001G354200--Sobic004G245500 Sobic001G354200--Sobic009G229000
Octagon: transcription factors


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