Gene annotation
Transcriptome id Sobic.003G145400.1
Synonym Sb03g012570
Functional annotation expressed protein
UniProt A0A1B6Q3D1
Pfam PF14144
Panther DB PTHR22952 PTHR22952:SF199
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006351; transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G18650 : transcription factor-related
RAP-DB (Rice) LOC_Os01g20030.1 : expressed protein
MaizeGDB (Corn) Zm00025a024302 , Zm00025a036073
Brachypodium KQK04103
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G525200 expressed protein -
2 Sobic.006G230700 wound induced protein, putative, expressed -
3 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase
4 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
5 Sobic.008G162700 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
6 Sobic.006G190500 expressed protein -
7 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
8 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
10 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
11 Sobic.002G104200 glyoxalase family protein, putative, expressed K00457: HPD, 4-hydroxyphenylpyruvate dioxygenase
12 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.006G190100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
14 Sobic.010G225251 - -
15 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
16 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.009G182900 - -
18 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
20 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G145400 Sobic003G145400 Sobic001G525200 Sobic001G525200 Sobic003G145400--Sobic001G525200 Sobic006G230700 Sobic006G230700 Sobic003G145400--Sobic006G230700 Sobic009G069800 Sobic009G069800 Sobic003G145400--Sobic009G069800 Sobic010G031100 Sobic010G031100 Sobic003G145400--Sobic010G031100 Sobic008G162700 Sobic008G162700 Sobic003G145400--Sobic008G162700 Sobic006G190500 Sobic006G190500 Sobic003G145400--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic003G145400--Sobic006G230800 Sobic004G236100 Sobic004G236100 Sobic003G145400--Sobic004G236100 Sobic004G336500 Sobic004G336500 Sobic003G145400--Sobic004G336500 Sobic001G525200--Sobic003G145400 Sobic002G104200 Sobic002G104200 Sobic001G525200--Sobic002G104200 Sobic001G525200--Sobic004G236100 Sobic001G525200--Sobic009G069800 Sobic001G525200--Sobic008G162700 Sobic002G042000 Sobic002G042000 Sobic001G525200--Sobic002G042000 Sobic001G525200--Sobic010G031100 Sobic001G525200--Sobic004G336500 Sobic004G067600 Sobic004G067600 Sobic001G525200--Sobic004G067600 Sobic006G230700--Sobic006G230800 Sobic006G230700--Sobic006G190500 Sobic006G230700--Sobic003G145400 Sobic009G111200 Sobic009G111200 Sobic006G230700--Sobic009G111200 Sobic006G230700--Sobic010G031100 Sobic010G220200 Sobic010G220200 Sobic006G230700--Sobic010G220200 Sobic006G230700--Sobic001G525200 Sobic005G010200 Sobic005G010200 Sobic006G230700--Sobic005G010200 Sobic009G077500 Sobic009G077500 Sobic006G230700--Sobic009G077500 Sobic009G069800--Sobic004G336500 Sobic007G008100 Sobic007G008100 Sobic009G069800--Sobic007G008100 Sobic010G225251 Sobic010G225251 Sobic009G069800--Sobic010G225251 Sobic009G069800--Sobic002G042000 Sobic001G280800 Sobic001G280800 Sobic009G069800--Sobic001G280800 Sobic001G477600 Sobic001G477600 Sobic009G069800--Sobic001G477600 Sobic009G069800--Sobic004G236100 Sobic010G166500 Sobic010G166500 Sobic009G069800--Sobic010G166500 Sobic003G041600 Sobic003G041600 Sobic009G069800--Sobic003G041600 Sobic010G032100 Sobic010G032100 Sobic010G031100--Sobic010G032100 Sobic010G031100--Sobic006G230800 Sobic001G149800 Sobic001G149800 Sobic010G031100--Sobic001G149800 Sobic002G215300 Sobic002G215300 Sobic010G031100--Sobic002G215300 Sobic006G032700 Sobic006G032700 Sobic010G031100--Sobic006G032700 Sobic006G230600 Sobic006G230600 Sobic010G031100--Sobic006G230600 Sobic002G261200 Sobic002G261200 Sobic010G031100--Sobic002G261200 Sobic003G138300 Sobic003G138300 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic008G162700--Sobic001G525200 Sobic008G162700--Sobic003G145400 Sobic008G162700--Sobic004G336500 Sobic010G198600 Sobic010G198600 Sobic008G162700--Sobic010G198600 Sobic008G162700--Sobic010G031100 Sobic008G162700--Sobic010G225251 Sobic008G162700--Sobic009G069800 Sobic008G162700--Sobic001G280800 Sobic009G148100 Sobic009G148100 Sobic008G162700--Sobic009G148100 Sobic006G190500--Sobic006G230800 Sobic003G123600 Sobic003G123600 Sobic006G190500--Sobic003G123600 Sobic006G190100 Sobic006G190100 Sobic006G190500--Sobic006G190100 Sobic002G415600 Sobic002G415600 Sobic006G190500--Sobic002G415600 Sobic006G230900 Sobic006G230900 Sobic006G190500--Sobic006G230900 Sobic006G190500--Sobic009G111200 Sobic010G217800 Sobic010G217800 Sobic006G190500--Sobic010G217800 Sobic003G144700 Sobic003G144700 Sobic006G190500--Sobic003G144700 Sobic006G190500--Sobic010G220200 Sobic006G230800--Sobic006G190500 Sobic006G230800--Sobic003G123600 Sobic006G230800--Sobic010G031100 Sobic001G107800 Sobic001G107800 Sobic006G230800--Sobic001G107800 Sobic006G230800--Sobic002G261200 Sobic006G230800--Sobic002G415600 Sobic006G230800--Sobic006G230600 Sobic006G230800--Sobic009G111200 Sobic006G230800--Sobic010G032100 Sobic004G236100--Sobic004G336500 Sobic004G236100--Sobic009G069800 Sobic004G236100--Sobic007G008100 Sobic001G054500 Sobic001G054500 Sobic004G236100--Sobic001G054500 Sobic004G236100--Sobic002G042000 Sobic004G236100--Sobic001G525200 Sobic004G236100--Sobic010G032100 Sobic009G229000 Sobic009G229000 Sobic004G236100--Sobic009G229000 Sobic001G354200 Sobic001G354200 Sobic004G236100--Sobic001G354200 Sobic004G336500--Sobic009G069800 Sobic003G367200 Sobic003G367200 Sobic004G336500--Sobic003G367200 Sobic001G169500 Sobic001G169500 Sobic004G336500--Sobic001G169500 Sobic004G336500--Sobic007G008100 Sobic001G112200 Sobic001G112200 Sobic004G336500--Sobic001G112200 Sobic004G336500--Sobic010G225251 Sobic003G382800 Sobic003G382800 Sobic004G336500--Sobic003G382800 Sobic004G336500--Sobic001G280800 Sobic001G138600 Sobic001G138600 Sobic004G336500--Sobic001G138600
Octagon: transcription factors


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