Gene annotation
Transcriptome id Sobic.006G190500.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PMU8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G33055 : -
RAP-DB (Rice) LOC_Os07g28614.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK16345
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G190500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
2 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G190100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
4 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
5 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
6 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
9 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
10 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G443800 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
14 Sobic.002G261200 expressed protein -
15 Sobic.006G230700 wound induced protein, putative, expressed -
16 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
17 Sobic.001G076100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G197200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
19 Sobic.009G148100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -


Gene co-expression network
sample Sobic006G190500 Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic006G190500--Sobic006G230800 Sobic003G123600 Sobic003G123600 Sobic006G190500--Sobic003G123600 Sobic006G190100 Sobic006G190100 Sobic006G190500--Sobic006G190100 Sobic002G415600 Sobic002G415600 Sobic006G190500--Sobic002G415600 Sobic006G230900 Sobic006G230900 Sobic006G190500--Sobic006G230900 Sobic009G111200 Sobic009G111200 Sobic006G190500--Sobic009G111200 Sobic010G217800 Sobic010G217800 Sobic006G190500--Sobic010G217800 Sobic003G144700 Sobic003G144700 Sobic006G190500--Sobic003G144700 Sobic010G220200 Sobic010G220200 Sobic006G190500--Sobic010G220200 Sobic006G230800--Sobic006G190500 Sobic006G230800--Sobic003G123600 Sobic010G031100 Sobic010G031100 Sobic006G230800--Sobic010G031100 Sobic001G107800 Sobic001G107800 Sobic006G230800--Sobic001G107800 Sobic002G261200 Sobic002G261200 Sobic006G230800--Sobic002G261200 Sobic006G230800--Sobic002G415600 Sobic006G230600 Sobic006G230600 Sobic006G230800--Sobic006G230600 Sobic006G230800--Sobic009G111200 Sobic010G032100 Sobic010G032100 Sobic006G230800--Sobic010G032100 Sobic003G148600 Sobic003G148600 Sobic003G123600--Sobic003G148600 Sobic003G123600--Sobic001G107800 Sobic003G123600--Sobic002G415600 Sobic003G197200 Sobic003G197200 Sobic003G123600--Sobic003G197200 Sobic003G123600--Sobic003G144700 Sobic001G076100 Sobic001G076100 Sobic003G123600--Sobic001G076100 Sobic003G123600--Sobic006G230800 Sobic003G123600--Sobic006G190500 Sobic001G443800 Sobic001G443800 Sobic003G123600--Sobic001G443800 Sobic006G190100--Sobic001G443800 Sobic001G138600 Sobic001G138600 Sobic006G190100--Sobic001G138600 Sobic006G190100--Sobic006G190500 Sobic007G213800 Sobic007G213800 Sobic006G190100--Sobic007G213800 Sobic006G190100--Sobic002G261200 Sobic006G190100--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic006G190100--Sobic001G371800 Sobic001G391500 Sobic001G391500 Sobic006G190100--Sobic001G391500 Sobic010G198600 Sobic010G198600 Sobic006G190100--Sobic010G198600 Sobic002G415600--Sobic010G217800 Sobic002G415600--Sobic003G123600 Sobic002G415600--Sobic006G230900 Sobic002G415600--Sobic003G144700 Sobic010G234700 Sobic010G234700 Sobic002G415600--Sobic010G234700 Sobic002G415600--Sobic006G190500 Sobic006G231100 Sobic006G231100 Sobic002G415600--Sobic006G231100 Sobic008G177800 Sobic008G177800 Sobic002G415600--Sobic008G177800 Sobic010G234600 Sobic010G234600 Sobic002G415600--Sobic010G234600 Sobic006G231200 Sobic006G231200 Sobic006G230900--Sobic006G231200 Sobic006G230900--Sobic006G231100 Sobic002G282300 Sobic002G282300 Sobic006G230900--Sobic002G282300 Sobic006G230900--Sobic007G213800 Sobic006G230900--Sobic010G217800 Sobic006G230900--Sobic002G415600 Sobic006G230900--Sobic003G144700 Sobic006G230900--Sobic003G123600 Sobic006G230900--Sobic003G197200 Sobic009G111200--Sobic006G190500 Sobic009G111200--Sobic002G415600 Sobic009G111200--Sobic006G230800 Sobic001G481600 Sobic001G481600 Sobic009G111200--Sobic001G481600 Sobic009G111200--Sobic003G123600 Sobic005G010200 Sobic005G010200 Sobic009G111200--Sobic005G010200 Sobic009G111200--Sobic006G231200 Sobic005G103500 Sobic005G103500 Sobic009G111200--Sobic005G103500 Sobic009G111200--Sobic010G217800 Sobic010G217800--Sobic002G415600 Sobic010G217800--Sobic006G230900 Sobic010G217800--Sobic003G144700 Sobic010G217800--Sobic003G123600 Sobic010G217800--Sobic006G231200 Sobic010G217800--Sobic006G231100 Sobic006G267200 Sobic006G267200 Sobic010G217800--Sobic006G267200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800 Sobic003G144700--Sobic003G197200 Sobic003G144700--Sobic003G148600 Sobic003G144700--Sobic007G213800 Sobic001G320900 Sobic001G320900 Sobic003G144700--Sobic001G320900 Sobic003G355100 Sobic003G355100 Sobic003G144700--Sobic003G355100 Sobic003G144700--Sobic001G391500 Sobic009G169000 Sobic009G169000 Sobic003G144700--Sobic009G169000 Sobic003G144700--Sobic003G123600 Sobic003G144700--Sobic006G230900 Sobic010G220200--Sobic010G217800 Sobic010G220200--Sobic005G010200 Sobic010G220200--Sobic002G415600 Sobic010G220200--Sobic006G190500 Sobic010G220200--Sobic006G230800 Sobic003G288600 Sobic003G288600 Sobic010G220200--Sobic003G288600 Sobic010G220200--Sobic006G231100 Sobic010G220200--Sobic008G177800 Sobic010G220200--Sobic006G230900
Octagon: transcription factors


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