Gene annotation
Transcriptome id Sobic.002G261200.1
Synonym Sb02g029590
Functional annotation expressed protein
UniProt C5X5B7
Pfam -
Panther DB PTHR33450 PTHR33450:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47920 : -
RAP-DB (Rice) LOC_Os09g33650.1 : expressed protein
MaizeGDB (Corn) Zm00025a047614
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G068600 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
3 Sobic.001G254100 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659838)@bHLH family protein, putative, expressed -
4 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
5 Sobic.003G394400 ubiquitin family protein, putative, expressed -
6 Sobic.004G166200 expressed protein -
7 Sobic.002G389000 cytochrome P450 72A1, putative, expressed -
8 Sobic.007G214400 EF hand family protein, putative, expressed -
9 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
10 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
11 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
12 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.001G371800 expressed protein -
15 Sobic.006G190100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
16 Sobic.007G026600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
17 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
19 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
20 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78


Gene co-expression network
sample Sobic002G261200 Sobic002G261200 Sobic001G107800 Sobic001G107800 Sobic002G261200--Sobic001G107800 Sobic002G068600 Sobic002G068600 Sobic002G261200--Sobic002G068600 Sobic001G254100 Sobic001G254100 Sobic002G261200--Sobic001G254100 Sobic010G032100 Sobic010G032100 Sobic002G261200--Sobic010G032100 Sobic003G394400 Sobic003G394400 Sobic002G261200--Sobic003G394400 Sobic004G166200 Sobic004G166200 Sobic002G261200--Sobic004G166200 Sobic002G389000 Sobic002G389000 Sobic002G261200--Sobic002G389000 Sobic007G214400 Sobic007G214400 Sobic002G261200--Sobic007G214400 Sobic001G149800 Sobic001G149800 Sobic002G261200--Sobic001G149800 Sobic003G123600 Sobic003G123600 Sobic001G107800--Sobic003G123600 Sobic001G107800--Sobic003G394400 Sobic001G107800--Sobic007G214400 Sobic003G148600 Sobic003G148600 Sobic001G107800--Sobic003G148600 Sobic001G107800--Sobic002G261200 Sobic001G371800 Sobic001G371800 Sobic001G107800--Sobic001G371800 Sobic001G107800--Sobic001G254100 Sobic003G197200 Sobic003G197200 Sobic001G107800--Sobic003G197200 Sobic001G107800--Sobic002G068600 Sobic002G068600--Sobic003G394400 Sobic003G086600 Sobic003G086600 Sobic002G068600--Sobic003G086600 Sobic002G068600--Sobic004G166200 Sobic002G068600--Sobic001G254100 Sobic002G068600--Sobic001G107800 Sobic002G068600--Sobic002G261200 Sobic007G026600 Sobic007G026600 Sobic002G068600--Sobic007G026600 Sobic002G068600--Sobic007G214400 Sobic002G068600--Sobic010G032100 Sobic001G254100--Sobic002G068600 Sobic001G254100--Sobic001G107800 Sobic001G254100--Sobic003G394400 Sobic001G254100--Sobic002G261200 Sobic001G254100--Sobic004G166200 Sobic001G254100--Sobic001G149800 Sobic001G254100--Sobic007G214400 Sobic001G254100--Sobic002G389000 Sobic001G254100--Sobic003G086600 Sobic001G397200 Sobic001G397200 Sobic010G032100--Sobic001G397200 Sobic010G032100--Sobic002G068600 Sobic010G031100 Sobic010G031100 Sobic010G032100--Sobic010G031100 Sobic010G032100--Sobic002G261200 Sobic010G032100--Sobic001G149800 Sobic001G309600 Sobic001G309600 Sobic010G032100--Sobic001G309600 Sobic006G032700 Sobic006G032700 Sobic010G032100--Sobic006G032700 Sobic010G032100--Sobic003G394400 Sobic001G481500 Sobic001G481500 Sobic010G032100--Sobic001G481500 Sobic003G394400--Sobic002G068600 Sobic003G394400--Sobic007G214400 Sobic003G394400--Sobic003G086600 Sobic003G394400--Sobic001G371800 Sobic003G394400--Sobic004G166200 Sobic003G394400--Sobic001G107800 Sobic003G355100 Sobic003G355100 Sobic003G394400--Sobic003G355100 Sobic003G394400--Sobic003G148600 Sobic007G214600 Sobic007G214600 Sobic003G394400--Sobic007G214600 Sobic004G166200--Sobic003G394400 Sobic004G166200--Sobic002G068600 Sobic004G166200--Sobic003G148600 Sobic004G166200--Sobic001G371800 Sobic004G166200--Sobic007G214600 Sobic004G166200--Sobic001G107800 Sobic004G166200--Sobic003G355100 Sobic003G382800 Sobic003G382800 Sobic004G166200--Sobic003G382800 Sobic004G166200--Sobic003G197200 Sobic002G389000--Sobic007G214400 Sobic002G389000--Sobic001G371800 Sobic002G389000--Sobic001G107800 Sobic002G389000--Sobic003G394400 Sobic001G076100 Sobic001G076100 Sobic002G389000--Sobic001G076100 Sobic006G230600 Sobic006G230600 Sobic002G389000--Sobic006G230600 Sobic004G088300 Sobic004G088300 Sobic002G389000--Sobic004G088300 Sobic002G389000--Sobic002G261200 Sobic002G389000--Sobic001G254100 Sobic007G214400--Sobic003G394400 Sobic007G214400--Sobic001G371800 Sobic007G214400--Sobic002G389000 Sobic007G214400--Sobic001G107800 Sobic007G214400--Sobic002G068600 Sobic007G214400--Sobic001G254100 Sobic007G214400--Sobic002G261200 Sobic007G214400--Sobic003G086600 Sobic007G214400--Sobic007G214600 Sobic001G149800--Sobic010G032100 Sobic001G149800--Sobic002G068600 Sobic001G149800--Sobic010G031100 Sobic001G149800--Sobic003G394400 Sobic001G149800--Sobic003G086600 Sobic001G149800--Sobic001G254100 Sobic001G149800--Sobic001G107800 Sobic001G149800--Sobic001G481500 Sobic001G149800--Sobic001G309600
Octagon: transcription factors


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