Gene annotation
Transcriptome id Sobic.001G149800.1,Sobic.001G149800.2
Synonym Sb01g013030
Functional annotation 2-aminoethanethiol dioxygenase, putative, expressed
UniProt C5WQH8 , A0A1Z5S5Q7
Pfam PF07847
Panther DB PTHR22966 PTHR22966:SF4
NCBI CDD KOG4281; Uncharacterized conserved protein
KEGG Orthology K10712; cysteamine dioxygenase
Gene Ontology GO:0016702; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


Orthologs (automatic annotation)
TAIR AT5G15120 : Protein of unknown function (DUF1637)
RAP-DB (Rice) LOC_Os03g45250.1 : 2-aminoethanethiol dioxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a007569
Brachypodium -
Barley -
Wheat TraesCS5A02G025300
Populus -


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cDNA sequences
Sobic.001G149800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
2 Sobic.002G068600 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
3 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
4 Sobic.003G394400 ubiquitin family protein, putative, expressed -
5 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
6 Sobic.001G254100 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659838)@bHLH family protein, putative, expressed -
7 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G481500 - -
9 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
10 Sobic.002G261200 expressed protein -
11 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
12 Sobic.007G026600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
13 Sobic.002G215300 expressed protein -
14 Sobic.007G214400 EF hand family protein, putative, expressed -
15 Sobic.004G166200 expressed protein -
16 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
17 Sobic.008G118700 respiratory burst oxidase, putative, expressed -
18 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
20 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G149800 Sobic001G149800 Sobic010G032100 Sobic010G032100 Sobic001G149800--Sobic010G032100 Sobic002G068600 Sobic002G068600 Sobic001G149800--Sobic002G068600 Sobic010G031100 Sobic010G031100 Sobic001G149800--Sobic010G031100 Sobic003G394400 Sobic003G394400 Sobic001G149800--Sobic003G394400 Sobic003G086600 Sobic003G086600 Sobic001G149800--Sobic003G086600 Sobic001G254100 Sobic001G254100 Sobic001G149800--Sobic001G254100 Sobic001G107800 Sobic001G107800 Sobic001G149800--Sobic001G107800 Sobic001G481500 Sobic001G481500 Sobic001G149800--Sobic001G481500 Sobic001G309600 Sobic001G309600 Sobic001G149800--Sobic001G309600 Sobic001G397200 Sobic001G397200 Sobic010G032100--Sobic001G397200 Sobic010G032100--Sobic002G068600 Sobic010G032100--Sobic010G031100 Sobic002G261200 Sobic002G261200 Sobic010G032100--Sobic002G261200 Sobic010G032100--Sobic001G149800 Sobic010G032100--Sobic001G309600 Sobic006G032700 Sobic006G032700 Sobic010G032100--Sobic006G032700 Sobic010G032100--Sobic003G394400 Sobic010G032100--Sobic001G481500 Sobic002G068600--Sobic003G394400 Sobic002G068600--Sobic003G086600 Sobic004G166200 Sobic004G166200 Sobic002G068600--Sobic004G166200 Sobic002G068600--Sobic001G254100 Sobic002G068600--Sobic001G107800 Sobic002G068600--Sobic002G261200 Sobic007G026600 Sobic007G026600 Sobic002G068600--Sobic007G026600 Sobic007G214400 Sobic007G214400 Sobic002G068600--Sobic007G214400 Sobic002G068600--Sobic010G032100 Sobic010G031100--Sobic010G032100 Sobic006G230800 Sobic006G230800 Sobic010G031100--Sobic006G230800 Sobic010G031100--Sobic001G149800 Sobic002G215300 Sobic002G215300 Sobic010G031100--Sobic002G215300 Sobic010G031100--Sobic006G032700 Sobic006G230600 Sobic006G230600 Sobic010G031100--Sobic006G230600 Sobic010G031100--Sobic002G261200 Sobic003G138300 Sobic003G138300 Sobic010G031100--Sobic003G138300 Sobic010G031100--Sobic001G254100 Sobic003G394400--Sobic002G068600 Sobic003G394400--Sobic007G214400 Sobic003G394400--Sobic003G086600 Sobic001G371800 Sobic001G371800 Sobic003G394400--Sobic001G371800 Sobic003G394400--Sobic004G166200 Sobic003G394400--Sobic001G107800 Sobic003G355100 Sobic003G355100 Sobic003G394400--Sobic003G355100 Sobic003G148600 Sobic003G148600 Sobic003G394400--Sobic003G148600 Sobic007G214600 Sobic007G214600 Sobic003G394400--Sobic007G214600 Sobic003G086600--Sobic002G068600 Sobic003G086600--Sobic003G394400 Sobic001G405500 Sobic001G405500 Sobic003G086600--Sobic001G405500 Sobic001G108200 Sobic001G108200 Sobic003G086600--Sobic001G108200 Sobic003G086600--Sobic004G166200 Sobic003G382800 Sobic003G382800 Sobic003G086600--Sobic003G382800 Sobic003G086600--Sobic003G355100 Sobic003G086600--Sobic001G397200 Sobic003G086600--Sobic007G026600 Sobic001G254100--Sobic002G068600 Sobic001G254100--Sobic001G107800 Sobic001G254100--Sobic003G394400 Sobic001G254100--Sobic002G261200 Sobic001G254100--Sobic004G166200 Sobic001G254100--Sobic001G149800 Sobic001G254100--Sobic007G214400 Sobic002G389000 Sobic002G389000 Sobic001G254100--Sobic002G389000 Sobic001G254100--Sobic003G086600 Sobic003G123600 Sobic003G123600 Sobic001G107800--Sobic003G123600 Sobic001G107800--Sobic003G394400 Sobic001G107800--Sobic007G214400 Sobic001G107800--Sobic003G148600 Sobic001G107800--Sobic002G261200 Sobic001G107800--Sobic001G371800 Sobic001G107800--Sobic001G254100 Sobic003G197200 Sobic003G197200 Sobic001G107800--Sobic003G197200 Sobic001G107800--Sobic002G068600 Sobic001G481500--Sobic001G309600 Sobic001G481500--Sobic006G032700 Sobic001G481500--Sobic001G397200 Sobic001G481500--Sobic010G032100 Sobic001G481500--Sobic001G149800 Sobic001G481500--Sobic003G138300 Sobic001G481500--Sobic003G086600 Sobic001G481500--Sobic002G215300 Sobic001G481500--Sobic002G068600 Sobic001G309600--Sobic001G397200 Sobic001G309600--Sobic001G481500 Sobic001G309600--Sobic010G032100 Sobic001G309600--Sobic006G032700 Sobic001G309600--Sobic001G149800 Sobic001G309600--Sobic003G138300 Sobic001G309600--Sobic003G086600 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600
Octagon: transcription factors


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