Gene annotation
Transcriptome id Sobic.002G215300.1
Synonym Sb02g025775
Functional annotation expressed protein
UniProt A0A1B6QCR1
Pfam -
Panther DB PTHR34045 PTHR34045:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72490 : -
RAP-DB (Rice) LOC_Os09g26840.1 : expressed protein
MaizeGDB (Corn) Zm00025a047146
Brachypodium KQJ90402 , KQJ90401 , PNT64679
Barley -
Wheat TraesCS5B02G210500 , TraesCS5A02G213300 , TraesCS5D02G218700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
2 Sobic.003G138300 expressed protein -
3 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
4 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
5 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
6 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
7 Sobic.001G481500 - -
8 Sobic.010G031300 auxin-induced protein 5NG4, putative, expressed -
9 Sobic.003G394400 ubiquitin family protein, putative, expressed -
10 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
11 Sobic.007G214400 EF hand family protein, putative, expressed -
12 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
13 Sobic.001G254100 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659838)@bHLH family protein, putative, expressed -
14 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
16 Sobic.002G261200 expressed protein -
17 Sobic.006G230600 expressed protein -
18 Sobic.002G068600 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
19 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
20 Sobic.002G389000 cytochrome P450 72A1, putative, expressed -


Gene co-expression network
sample Sobic002G215300 Sobic002G215300 Sobic010G031100 Sobic010G031100 Sobic002G215300--Sobic010G031100 Sobic003G138300 Sobic003G138300 Sobic002G215300--Sobic003G138300 Sobic001G309600 Sobic001G309600 Sobic002G215300--Sobic001G309600 Sobic001G149800 Sobic001G149800 Sobic002G215300--Sobic001G149800 Sobic010G032100 Sobic010G032100 Sobic002G215300--Sobic010G032100 Sobic006G032700 Sobic006G032700 Sobic002G215300--Sobic006G032700 Sobic001G481500 Sobic001G481500 Sobic002G215300--Sobic001G481500 Sobic010G031300 Sobic010G031300 Sobic002G215300--Sobic010G031300 Sobic003G394400 Sobic003G394400 Sobic002G215300--Sobic003G394400 Sobic010G031100--Sobic010G032100 Sobic006G230800 Sobic006G230800 Sobic010G031100--Sobic006G230800 Sobic010G031100--Sobic001G149800 Sobic010G031100--Sobic002G215300 Sobic010G031100--Sobic006G032700 Sobic006G230600 Sobic006G230600 Sobic010G031100--Sobic006G230600 Sobic002G261200 Sobic002G261200 Sobic010G031100--Sobic002G261200 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic003G138300--Sobic006G032700 Sobic003G138300--Sobic001G309600 Sobic003G138300--Sobic002G215300 Sobic003G367200 Sobic003G367200 Sobic003G138300--Sobic003G367200 Sobic003G138300--Sobic010G032100 Sobic001G397200 Sobic001G397200 Sobic003G138300--Sobic001G397200 Sobic003G138300--Sobic001G481500 Sobic003G138300--Sobic010G031100 Sobic003G138300--Sobic001G149800 Sobic001G309600--Sobic001G397200 Sobic001G309600--Sobic001G481500 Sobic001G309600--Sobic010G032100 Sobic001G309600--Sobic006G032700 Sobic001G309600--Sobic001G149800 Sobic001G309600--Sobic003G138300 Sobic003G086600 Sobic003G086600 Sobic001G309600--Sobic003G086600 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600 Sobic001G149800--Sobic010G032100 Sobic002G068600 Sobic002G068600 Sobic001G149800--Sobic002G068600 Sobic001G149800--Sobic010G031100 Sobic001G149800--Sobic003G394400 Sobic001G149800--Sobic003G086600 Sobic001G149800--Sobic001G254100 Sobic001G107800 Sobic001G107800 Sobic001G149800--Sobic001G107800 Sobic001G149800--Sobic001G481500 Sobic001G149800--Sobic001G309600 Sobic010G032100--Sobic001G397200 Sobic010G032100--Sobic002G068600 Sobic010G032100--Sobic010G031100 Sobic010G032100--Sobic002G261200 Sobic010G032100--Sobic001G149800 Sobic010G032100--Sobic001G309600 Sobic010G032100--Sobic006G032700 Sobic010G032100--Sobic003G394400 Sobic010G032100--Sobic001G481500 Sobic006G032700--Sobic003G138300 Sobic006G032700--Sobic010G032100 Sobic006G032700--Sobic001G309600 Sobic006G032700--Sobic001G397200 Sobic006G032700--Sobic001G481500 Sobic001G354200 Sobic001G354200 Sobic006G032700--Sobic001G354200 Sobic006G032700--Sobic010G031100 Sobic006G032700--Sobic002G215300 Sobic006G032700--Sobic001G149800 Sobic001G481500--Sobic001G309600 Sobic001G481500--Sobic006G032700 Sobic001G481500--Sobic001G397200 Sobic001G481500--Sobic010G032100 Sobic001G481500--Sobic001G149800 Sobic001G481500--Sobic003G138300 Sobic001G481500--Sobic003G086600 Sobic001G481500--Sobic002G215300 Sobic001G481500--Sobic002G068600 Sobic010G031300--Sobic001G309600 Sobic010G031300--Sobic001G254100 Sobic010G031300--Sobic002G215300 Sobic010G031300--Sobic003G086600 Sobic010G031300--Sobic001G107800 Sobic010G031300--Sobic001G397200 Sobic010G031300--Sobic003G394400 Sobic010G031300--Sobic010G032100 Sobic010G031300--Sobic002G261200 Sobic003G394400--Sobic002G068600 Sobic007G214400 Sobic007G214400 Sobic003G394400--Sobic007G214400 Sobic003G394400--Sobic003G086600 Sobic001G371800 Sobic001G371800 Sobic003G394400--Sobic001G371800 Sobic004G166200 Sobic004G166200 Sobic003G394400--Sobic004G166200 Sobic003G394400--Sobic001G107800 Sobic003G355100 Sobic003G355100 Sobic003G394400--Sobic003G355100 Sobic003G148600 Sobic003G148600 Sobic003G394400--Sobic003G148600 Sobic007G214600 Sobic007G214600 Sobic003G394400--Sobic007G214600
Octagon: transcription factors


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