Gene annotation
Transcriptome id Sobic.010G031300.1
Synonym Sb10g002840, WAT1
Functional annotation auxin-induced protein 5NG4, putative, expressed
UniProt A0A194YH17
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF62
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G75500 : Walls Are Thin 1
RAP-DB (Rice) LOC_Os01g02870.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a041479
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G031300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
2 Sobic.001G254100 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659838)@bHLH family protein, putative, expressed -
3 Sobic.002G215300 expressed protein -
4 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
5 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
7 Sobic.003G394400 ubiquitin family protein, putative, expressed -
8 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
9 Sobic.002G261200 expressed protein -
10 Sobic.007G214400 EF hand family protein, putative, expressed -
11 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
12 Sobic.002G068600 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
13 Sobic.003G377900 chitin-inducible gibberellin-responsive protein, putative, expressed -
14 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
15 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
16 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
17 Sobic.007G026600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
18 Sobic.003G138300 expressed protein -
19 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
20 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -


Gene co-expression network
sample Sobic010G031300 Sobic010G031300 Sobic001G309600 Sobic001G309600 Sobic010G031300--Sobic001G309600 Sobic001G254100 Sobic001G254100 Sobic010G031300--Sobic001G254100 Sobic002G215300 Sobic002G215300 Sobic010G031300--Sobic002G215300 Sobic003G086600 Sobic003G086600 Sobic010G031300--Sobic003G086600 Sobic001G107800 Sobic001G107800 Sobic010G031300--Sobic001G107800 Sobic001G397200 Sobic001G397200 Sobic010G031300--Sobic001G397200 Sobic003G394400 Sobic003G394400 Sobic010G031300--Sobic003G394400 Sobic010G032100 Sobic010G032100 Sobic010G031300--Sobic010G032100 Sobic002G261200 Sobic002G261200 Sobic010G031300--Sobic002G261200 Sobic001G309600--Sobic001G397200 Sobic001G481500 Sobic001G481500 Sobic001G309600--Sobic001G481500 Sobic001G309600--Sobic010G032100 Sobic006G032700 Sobic006G032700 Sobic001G309600--Sobic006G032700 Sobic001G149800 Sobic001G149800 Sobic001G309600--Sobic001G149800 Sobic003G138300 Sobic003G138300 Sobic001G309600--Sobic003G138300 Sobic001G309600--Sobic003G086600 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600 Sobic002G068600 Sobic002G068600 Sobic001G254100--Sobic002G068600 Sobic001G254100--Sobic001G107800 Sobic001G254100--Sobic003G394400 Sobic001G254100--Sobic002G261200 Sobic004G166200 Sobic004G166200 Sobic001G254100--Sobic004G166200 Sobic001G254100--Sobic001G149800 Sobic007G214400 Sobic007G214400 Sobic001G254100--Sobic007G214400 Sobic002G389000 Sobic002G389000 Sobic001G254100--Sobic002G389000 Sobic001G254100--Sobic003G086600 Sobic010G031100 Sobic010G031100 Sobic002G215300--Sobic010G031100 Sobic002G215300--Sobic003G138300 Sobic002G215300--Sobic001G309600 Sobic002G215300--Sobic001G149800 Sobic002G215300--Sobic010G032100 Sobic002G215300--Sobic006G032700 Sobic002G215300--Sobic001G481500 Sobic002G215300--Sobic010G031300 Sobic002G215300--Sobic003G394400 Sobic003G086600--Sobic002G068600 Sobic003G086600--Sobic003G394400 Sobic001G405500 Sobic001G405500 Sobic003G086600--Sobic001G405500 Sobic001G108200 Sobic001G108200 Sobic003G086600--Sobic001G108200 Sobic003G086600--Sobic004G166200 Sobic003G382800 Sobic003G382800 Sobic003G086600--Sobic003G382800 Sobic003G355100 Sobic003G355100 Sobic003G086600--Sobic003G355100 Sobic003G086600--Sobic001G397200 Sobic007G026600 Sobic007G026600 Sobic003G086600--Sobic007G026600 Sobic003G123600 Sobic003G123600 Sobic001G107800--Sobic003G123600 Sobic001G107800--Sobic003G394400 Sobic001G107800--Sobic007G214400 Sobic003G148600 Sobic003G148600 Sobic001G107800--Sobic003G148600 Sobic001G107800--Sobic002G261200 Sobic001G371800 Sobic001G371800 Sobic001G107800--Sobic001G371800 Sobic001G107800--Sobic001G254100 Sobic003G197200 Sobic003G197200 Sobic001G107800--Sobic003G197200 Sobic001G107800--Sobic002G068600 Sobic001G397200--Sobic010G032100 Sobic001G397200--Sobic001G309600 Sobic001G397200--Sobic006G032700 Sobic001G397200--Sobic001G481500 Sobic001G397200--Sobic003G086600 Sobic008G070350 Sobic008G070350 Sobic001G397200--Sobic008G070350 Sobic001G397200--Sobic002G068600 Sobic003G367200 Sobic003G367200 Sobic001G397200--Sobic003G367200 Sobic001G397200--Sobic007G026600 Sobic003G394400--Sobic002G068600 Sobic003G394400--Sobic007G214400 Sobic003G394400--Sobic003G086600 Sobic003G394400--Sobic001G371800 Sobic003G394400--Sobic004G166200 Sobic003G394400--Sobic001G107800 Sobic003G394400--Sobic003G355100 Sobic003G394400--Sobic003G148600 Sobic007G214600 Sobic007G214600 Sobic003G394400--Sobic007G214600 Sobic010G032100--Sobic001G397200 Sobic010G032100--Sobic002G068600 Sobic010G032100--Sobic010G031100 Sobic010G032100--Sobic002G261200 Sobic010G032100--Sobic001G149800 Sobic010G032100--Sobic001G309600 Sobic010G032100--Sobic006G032700 Sobic010G032100--Sobic003G394400 Sobic010G032100--Sobic001G481500 Sobic002G261200--Sobic001G107800 Sobic002G261200--Sobic002G068600 Sobic002G261200--Sobic001G254100 Sobic002G261200--Sobic010G032100 Sobic002G261200--Sobic003G394400 Sobic002G261200--Sobic004G166200 Sobic002G261200--Sobic002G389000 Sobic002G261200--Sobic007G214400 Sobic002G261200--Sobic001G149800
Octagon: transcription factors


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