Gene annotation
Transcriptome id Sobic.010G220200.1
Synonym Sb10g026570
Functional annotation haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed
UniProt C5Z7M3
Pfam PF13419
Panther DB PTHR12725 PTHR12725:SF61
NCBI CDD KOG3085; Predicted hydrolase (HAD superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G44730 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os06g45440.1 : haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed
MaizeGDB (Corn) Zm00025a051742
Brachypodium KQK16999
Barley HORVU0Hr1G022310.6 , HORVU0Hr1G022310.4 , HORVU0Hr1G022310.5 , HORVU0Hr1G022310.2 , HORVU0Hr1G022310.3 , HORVU0Hr1G022310.1
Wheat TraesCS7D02G468900 , TraesCS7A02G482000 , TraesCS7B02G384200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.006G190500 expressed protein -
5 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
6 Sobic.003G288600 reticulon domain containing protein, putative, expressed -
7 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
8 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
9 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
10 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
11 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
12 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
14 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
15 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
16 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
18 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
19 Sobic.005G103500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase, putative, expressed -
20 Sobic.001G101500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha


Gene co-expression network
sample Sobic010G220200 Sobic010G220200 Sobic010G217800 Sobic010G217800 Sobic010G220200--Sobic010G217800 Sobic005G010200 Sobic005G010200 Sobic010G220200--Sobic005G010200 Sobic002G415600 Sobic002G415600 Sobic010G220200--Sobic002G415600 Sobic006G190500 Sobic006G190500 Sobic010G220200--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic010G220200--Sobic006G230800 Sobic003G288600 Sobic003G288600 Sobic010G220200--Sobic003G288600 Sobic006G231100 Sobic006G231100 Sobic010G220200--Sobic006G231100 Sobic008G177800 Sobic008G177800 Sobic010G220200--Sobic008G177800 Sobic006G230900 Sobic006G230900 Sobic010G220200--Sobic006G230900 Sobic010G217800--Sobic002G415600 Sobic010G217800--Sobic006G230900 Sobic003G144700 Sobic003G144700 Sobic010G217800--Sobic003G144700 Sobic003G123600 Sobic003G123600 Sobic010G217800--Sobic003G123600 Sobic006G231200 Sobic006G231200 Sobic010G217800--Sobic006G231200 Sobic010G217800--Sobic006G231100 Sobic006G267200 Sobic006G267200 Sobic010G217800--Sobic006G267200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800 Sobic005G010200--Sobic010G220200 Sobic001G483400 Sobic001G483400 Sobic005G010200--Sobic001G483400 Sobic005G010200--Sobic008G177800 Sobic009G111200 Sobic009G111200 Sobic005G010200--Sobic009G111200 Sobic005G010200--Sobic006G190500 Sobic005G010200--Sobic010G217800 Sobic005G010200--Sobic002G415600 Sobic009G066800 Sobic009G066800 Sobic005G010200--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic005G010200--Sobic009G129000 Sobic002G415600--Sobic010G217800 Sobic002G415600--Sobic003G123600 Sobic002G415600--Sobic006G230900 Sobic002G415600--Sobic003G144700 Sobic010G234700 Sobic010G234700 Sobic002G415600--Sobic010G234700 Sobic002G415600--Sobic006G190500 Sobic002G415600--Sobic006G231100 Sobic002G415600--Sobic008G177800 Sobic010G234600 Sobic010G234600 Sobic002G415600--Sobic010G234600 Sobic006G190500--Sobic006G230800 Sobic006G190500--Sobic003G123600 Sobic006G190100 Sobic006G190100 Sobic006G190500--Sobic006G190100 Sobic006G190500--Sobic002G415600 Sobic006G190500--Sobic006G230900 Sobic006G190500--Sobic009G111200 Sobic006G190500--Sobic010G217800 Sobic006G190500--Sobic003G144700 Sobic006G190500--Sobic010G220200 Sobic006G230800--Sobic006G190500 Sobic006G230800--Sobic003G123600 Sobic010G031100 Sobic010G031100 Sobic006G230800--Sobic010G031100 Sobic001G107800 Sobic001G107800 Sobic006G230800--Sobic001G107800 Sobic002G261200 Sobic002G261200 Sobic006G230800--Sobic002G261200 Sobic006G230800--Sobic002G415600 Sobic006G230600 Sobic006G230600 Sobic006G230800--Sobic006G230600 Sobic006G230800--Sobic009G111200 Sobic010G032100 Sobic010G032100 Sobic006G230800--Sobic010G032100 Sobic003G288600--Sobic006G267200 Sobic003G288600--Sobic010G217800 Sobic003G288600--Sobic010G220200 Sobic003G288600--Sobic006G231100 Sobic003G288600--Sobic008G177800 Sobic009G141800 Sobic009G141800 Sobic003G288600--Sobic009G141800 Sobic003G288600--Sobic002G415600 Sobic001G477300 Sobic001G477300 Sobic003G288600--Sobic001G477300 Sobic005G103300 Sobic005G103300 Sobic003G288600--Sobic005G103300 Sobic006G231100--Sobic008G177800 Sobic006G231100--Sobic006G230900 Sobic006G231100--Sobic006G231200 Sobic006G231100--Sobic010G217800 Sobic006G231100--Sobic002G415600 Sobic006G231100--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic006G231100--Sobic004G286600 Sobic002G294700 Sobic002G294700 Sobic006G231100--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic006G231100--Sobic002G282300 Sobic008G177800--Sobic002G294700 Sobic008G177800--Sobic006G231100 Sobic008G177800--Sobic010G234600 Sobic008G177800--Sobic004G286600 Sobic008G177800--Sobic002G415600 Sobic008G177800--Sobic010G217800 Sobic009G255500 Sobic009G255500 Sobic008G177800--Sobic009G255500 Sobic008G177800--Sobic006G230900 Sobic001G077700 Sobic001G077700 Sobic008G177800--Sobic001G077700 Sobic006G230900--Sobic006G231200 Sobic006G230900--Sobic006G231100 Sobic006G230900--Sobic002G282300 Sobic007G213800 Sobic007G213800 Sobic006G230900--Sobic007G213800 Sobic006G230900--Sobic010G217800 Sobic006G230900--Sobic002G415600 Sobic006G230900--Sobic003G144700 Sobic006G230900--Sobic003G123600 Sobic003G197200 Sobic003G197200 Sobic006G230900--Sobic003G197200
Octagon: transcription factors


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