Gene annotation
Transcriptome id Sobic.005G103500.1
Synonym ATADH, ADH1, ATADH1, ADH, Sb05g009360
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
dehydrogenase, putative, expressed
UniProt A0A1B6PRF2
Pfam PF00107
Panther DB PTHR11695 PTHR11695:SF499
NCBI CDD KOG0022; Alcohol dehydrogenase, class III
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G77120 : alcohol dehydrogenase 1
RAP-DB (Rice) LOC_Os11g10480.4 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a008056
Brachypodium KQJ88989
Barley HORVU2Hr1G020900.7 , HORVU2Hr1G020900.6 , HORVU2Hr1G020900.5 , HORVU2Hr1G020900.4 , HORVU2Hr1G020900.3 , HORVU2Hr1G020900.2 , HORVU2Hr1G020900.1 , HORVU1Hr1G003130.2 , HORVU1Hr1G003130.1 , HORVU3Hr1G034820.4 , HORVU3Hr1G034820.5 , HORVU3Hr1G034820.6 , HORVU3Hr1G034820.7 , HORVU3Hr1G034820.1 , HORVU3Hr1G034820.2 , HORVU3Hr1G034820.3 , HORVU4Hr1G016810.8 , HORVU4Hr1G016810.9 , HORVU4Hr1G016810.2 , HORVU4Hr1G016810.3 , HORVU4Hr1G016810.1 , HORVU4Hr1G016810.6 , HORVU4Hr1G016810.7 , HORVU4Hr1G016810.4 , HORVU4Hr1G016810.5 , HORVU5Hr1G051820.3 , HORVU5Hr1G051820.2 , HORVU5Hr1G051820.1 , HORVU5Hr1G051820.4 , HORVU4Hr1G016810.10 , HORVU4Hr1G016810.11 , HORVU4Hr1G016810.12 , HORVU4Hr1G016810.13 , HORVU4Hr1G016810.14 , HORVU4Hr1G016810.15 , HORVU4Hr1G016810.16 , HORVU4Hr1G016810.17 , HORVU7Hr1G058160.4 , HORVU7Hr1G058160.3 , HORVU7Hr1G058160.2 , HORVU7Hr1G058160.1 , HORVU0Hr1G008870.3 , HORVU0Hr1G008870.2 , HORVU0Hr1G008870.1 , HORVU0Hr1G008870.5 , HORVU0Hr1G008870.4 , HORVU5Hr1G010490.1 , HORVU5Hr1G010490.3 , HORVU5Hr1G010490.2 , HORVU5Hr1G010490.5 , HORVU5Hr1G010490.4
Wheat TraesCS4D02G103000 , TraesCS4A02G202100 , TraesCS4A02G202100 , TraesCS4A02G202300 , TraesCS4B02G106300 , TraesCS4B02G106300 , TraesCS4D02G103000
Populus -


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cDNA sequences
Sobic.005G103500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
2 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
3 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
4 Sobic.001G481600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.007G026600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
6 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
7 Sobic.008G070350 - K01945: phosphoribosylamine---glycine ligase
8 Sobic.003G387000 expressed protein -
9 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
10 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
11 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
12 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
13 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
15 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
16 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
17 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
18 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.001G481500 - -
20 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -


Gene co-expression network
sample Sobic005G103500 Sobic005G103500 Sobic001G405500 Sobic001G405500 Sobic005G103500--Sobic001G405500 Sobic001G397200 Sobic001G397200 Sobic005G103500--Sobic001G397200 Sobic005G103300 Sobic005G103300 Sobic005G103500--Sobic005G103300 Sobic001G481600 Sobic001G481600 Sobic005G103500--Sobic001G481600 Sobic007G026600 Sobic007G026600 Sobic005G103500--Sobic007G026600 Sobic001G309600 Sobic001G309600 Sobic005G103500--Sobic001G309600 Sobic008G070350 Sobic008G070350 Sobic005G103500--Sobic008G070350 Sobic003G387000 Sobic003G387000 Sobic005G103500--Sobic003G387000 Sobic006G032700 Sobic006G032700 Sobic005G103500--Sobic006G032700 Sobic003G086600 Sobic003G086600 Sobic001G405500--Sobic003G086600 Sobic003G148600 Sobic003G148600 Sobic001G405500--Sobic003G148600 Sobic003G394400 Sobic003G394400 Sobic001G405500--Sobic003G394400 Sobic001G108200 Sobic001G108200 Sobic001G405500--Sobic001G108200 Sobic001G405500--Sobic007G026600 Sobic003G144700 Sobic003G144700 Sobic001G405500--Sobic003G144700 Sobic003G355100 Sobic003G355100 Sobic001G405500--Sobic003G355100 Sobic003G382800 Sobic003G382800 Sobic001G405500--Sobic003G382800 Sobic006G267200 Sobic006G267200 Sobic001G405500--Sobic006G267200 Sobic010G032100 Sobic010G032100 Sobic001G397200--Sobic010G032100 Sobic001G397200--Sobic001G309600 Sobic001G397200--Sobic006G032700 Sobic001G481500 Sobic001G481500 Sobic001G397200--Sobic001G481500 Sobic001G397200--Sobic003G086600 Sobic001G397200--Sobic008G070350 Sobic002G068600 Sobic002G068600 Sobic001G397200--Sobic002G068600 Sobic003G367200 Sobic003G367200 Sobic001G397200--Sobic003G367200 Sobic001G397200--Sobic007G026600 Sobic002G414600 Sobic002G414600 Sobic005G103300--Sobic002G414600 Sobic005G103300--Sobic005G103500 Sobic003G334600 Sobic003G334600 Sobic005G103300--Sobic003G334600 Sobic005G103300--Sobic003G387000 Sobic001G252300 Sobic001G252300 Sobic005G103300--Sobic001G252300 Sobic001G097600 Sobic001G097600 Sobic005G103300--Sobic001G097600 Sobic001G119000 Sobic001G119000 Sobic005G103300--Sobic001G119000 Sobic002G082600 Sobic002G082600 Sobic005G103300--Sobic002G082600 Sobic002G359300 Sobic002G359300 Sobic005G103300--Sobic002G359300 Sobic001G481600--Sobic001G309600 Sobic001G481600--Sobic007G026600 Sobic001G481600--Sobic001G405500 Sobic001G481600--Sobic001G397200 Sobic001G481600--Sobic005G103500 Sobic003G123600 Sobic003G123600 Sobic001G481600--Sobic003G123600 Sobic001G149800 Sobic001G149800 Sobic001G481600--Sobic001G149800 Sobic003G377100 Sobic003G377100 Sobic001G481600--Sobic003G377100 Sobic009G111200 Sobic009G111200 Sobic001G481600--Sobic009G111200 Sobic007G026600--Sobic002G068600 Sobic007G026600--Sobic001G405500 Sobic007G026600--Sobic003G148600 Sobic001G107800 Sobic001G107800 Sobic007G026600--Sobic001G107800 Sobic007G026600--Sobic003G086600 Sobic004G280200 Sobic004G280200 Sobic007G026600--Sobic004G280200 Sobic007G026600--Sobic003G123600 Sobic007G026600--Sobic003G394400 Sobic007G026600--Sobic003G144700 Sobic001G309600--Sobic001G397200 Sobic001G309600--Sobic001G481500 Sobic001G309600--Sobic010G032100 Sobic001G309600--Sobic006G032700 Sobic001G309600--Sobic001G149800 Sobic003G138300 Sobic003G138300 Sobic001G309600--Sobic003G138300 Sobic001G309600--Sobic003G086600 Sobic002G215300 Sobic002G215300 Sobic001G309600--Sobic002G215300 Sobic001G309600--Sobic001G481600 Sobic008G070350--Sobic001G397200 Sobic009G035200 Sobic009G035200 Sobic008G070350--Sobic009G035200 Sobic005G051200 Sobic005G051200 Sobic008G070350--Sobic005G051200 Sobic008G070350--Sobic005G103500 Sobic008G070350--Sobic001G309600 Sobic008G070350--Sobic006G032700 Sobic008G070350--Sobic007G026600 Sobic008G070350--Sobic004G280200 Sobic008G070350--Sobic003G086600 Sobic003G387000--Sobic003G334600 Sobic003G387000--Sobic004G280200 Sobic003G387000--Sobic001G405500 Sobic009G183300 Sobic009G183300 Sobic003G387000--Sobic009G183300 Sobic001G320900 Sobic001G320900 Sobic003G387000--Sobic001G320900 Sobic009G141800 Sobic009G141800 Sobic003G387000--Sobic009G141800 Sobic003G387000--Sobic005G103300 Sobic003G393900 Sobic003G393900 Sobic003G387000--Sobic003G393900 Sobic003G369100 Sobic003G369100 Sobic003G387000--Sobic003G369100 Sobic006G032700--Sobic003G138300 Sobic006G032700--Sobic010G032100 Sobic006G032700--Sobic001G309600 Sobic006G032700--Sobic001G397200 Sobic006G032700--Sobic001G481500 Sobic001G354200 Sobic001G354200 Sobic006G032700--Sobic001G354200 Sobic010G031100 Sobic010G031100 Sobic006G032700--Sobic010G031100 Sobic006G032700--Sobic002G215300 Sobic006G032700--Sobic001G149800
Octagon: transcription factors


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