Gene annotation
Transcriptome id Sobic.001G101500.1
Synonym Sb01g009070, ERO1, AERO1
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
endoplasmic oxidoreductin-1 precursor, putative, expressed
UniProt C5WLX3
Pfam PF04137
Panther DB PTHR12613 PTHR12613:SF0
NCBI CDD KOG2608; Endoplasmic reticulum membrane-associated oxidoreductin involved in disulfide bond formation
KEGG Orthology K10950; ERO1-like protein alpha
Gene Ontology GO:0016671; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor GO:0005783endoplasmic reticulum GO:0003756protein disulfide isomerase activity


Orthologs (automatic annotation)
TAIR AT1G72280 : endoplasmic reticulum oxidoreductins 1
RAP-DB (Rice) LOC_Os03g52340.1 : endoplasmic oxidoreductin-1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a008031 , Zm00025a016870
Brachypodium KQJ84103 , PNT61685 , PNT61684 , KQJ84105 , KQJ84104 , KQK13367
Barley HORVU4Hr1G010650.4 , HORVU4Hr1G010650.5 , HORVU4Hr1G010650.2 , HORVU4Hr1G010650.3 , HORVU4Hr1G010650.1
Wheat TraesCS4D02G063000 , TraesCS4B02G064100 , TraesCS4A02G250800
Populus PNT59783 , PNT59782 , PNT59845


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cDNA sequences
Sobic.001G101500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
3 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
4 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
5 Sobic.009G255500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
6 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
7 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
8 Sobic.010G234700 expressed protein -
9 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
10 Sobic.010G105800 calmodulin-binding heat-shock protein, putative, expressed -
11 Sobic.003G310700 mal d 1-associated protein, putative, expressed -
12 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
13 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
14 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G481600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
17 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
18 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
19 Sobic.006G231332 - -
20 Sobic.003G288600 reticulon domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G101500 Sobic001G101500 Sobic010G217800 Sobic010G217800 Sobic001G101500--Sobic010G217800 Sobic010G220200 Sobic010G220200 Sobic001G101500--Sobic010G220200 Sobic008G177800 Sobic008G177800 Sobic001G101500--Sobic008G177800 Sobic002G415600 Sobic002G415600 Sobic001G101500--Sobic002G415600 Sobic009G255500 Sobic009G255500 Sobic001G101500--Sobic009G255500 Sobic010G234600 Sobic010G234600 Sobic001G101500--Sobic010G234600 Sobic004G036600 Sobic004G036600 Sobic001G101500--Sobic004G036600 Sobic010G234700 Sobic010G234700 Sobic001G101500--Sobic010G234700 Sobic002G294700 Sobic002G294700 Sobic001G101500--Sobic002G294700 Sobic010G217800--Sobic002G415600 Sobic006G230900 Sobic006G230900 Sobic010G217800--Sobic006G230900 Sobic003G144700 Sobic003G144700 Sobic010G217800--Sobic003G144700 Sobic003G123600 Sobic003G123600 Sobic010G217800--Sobic003G123600 Sobic006G231200 Sobic006G231200 Sobic010G217800--Sobic006G231200 Sobic006G231100 Sobic006G231100 Sobic010G217800--Sobic006G231100 Sobic006G267200 Sobic006G267200 Sobic010G217800--Sobic006G267200 Sobic010G217800--Sobic010G220200 Sobic010G217800--Sobic008G177800 Sobic010G220200--Sobic010G217800 Sobic005G010200 Sobic005G010200 Sobic010G220200--Sobic005G010200 Sobic010G220200--Sobic002G415600 Sobic006G190500 Sobic006G190500 Sobic010G220200--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic010G220200--Sobic006G230800 Sobic003G288600 Sobic003G288600 Sobic010G220200--Sobic003G288600 Sobic010G220200--Sobic006G231100 Sobic010G220200--Sobic008G177800 Sobic010G220200--Sobic006G230900 Sobic008G177800--Sobic002G294700 Sobic008G177800--Sobic006G231100 Sobic008G177800--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic008G177800--Sobic004G286600 Sobic008G177800--Sobic002G415600 Sobic008G177800--Sobic010G217800 Sobic008G177800--Sobic009G255500 Sobic008G177800--Sobic006G230900 Sobic001G077700 Sobic001G077700 Sobic008G177800--Sobic001G077700 Sobic002G415600--Sobic010G217800 Sobic002G415600--Sobic003G123600 Sobic002G415600--Sobic006G230900 Sobic002G415600--Sobic003G144700 Sobic002G415600--Sobic010G234700 Sobic002G415600--Sobic006G190500 Sobic002G415600--Sobic006G231100 Sobic002G415600--Sobic008G177800 Sobic002G415600--Sobic010G234600 Sobic009G255500--Sobic008G177800 Sobic001G052300 Sobic001G052300 Sobic009G255500--Sobic001G052300 Sobic006G165100 Sobic006G165100 Sobic009G255500--Sobic006G165100 Sobic009G183300 Sobic009G183300 Sobic009G255500--Sobic009G183300 Sobic009G255500--Sobic002G294700 Sobic002G248100 Sobic002G248100 Sobic009G255500--Sobic002G248100 Sobic009G255500--Sobic001G101500 Sobic003G324400 Sobic003G324400 Sobic009G255500--Sobic003G324400 Sobic009G255500--Sobic010G234600 Sobic010G234600--Sobic010G234700 Sobic010G234600--Sobic008G177800 Sobic010G234600--Sobic001G077700 Sobic010G234600--Sobic006G231100 Sobic010G234600--Sobic002G294700 Sobic010G234600--Sobic002G415600 Sobic006G231332 Sobic006G231332 Sobic010G234600--Sobic006G231332 Sobic009G071800 Sobic009G071800 Sobic010G234600--Sobic009G071800 Sobic010G234600--Sobic002G248100 Sobic004G036600--Sobic002G294700 Sobic004G036600--Sobic008G177800 Sobic004G036600--Sobic006G231100 Sobic001G173300 Sobic001G173300 Sobic004G036600--Sobic001G173300 Sobic004G036600--Sobic010G234600 Sobic001G516600 Sobic001G516600 Sobic004G036600--Sobic001G516600 Sobic002G374100 Sobic002G374100 Sobic004G036600--Sobic002G374100 Sobic009G141800 Sobic009G141800 Sobic004G036600--Sobic009G141800 Sobic009G217000 Sobic009G217000 Sobic004G036600--Sobic009G217000 Sobic010G234700--Sobic010G234600 Sobic010G234700--Sobic002G415600 Sobic004G199300 Sobic004G199300 Sobic010G234700--Sobic004G199300 Sobic010G234700--Sobic001G077700 Sobic010G234700--Sobic010G217800 Sobic010G234700--Sobic006G230900 Sobic010G234700--Sobic008G177800 Sobic010G234700--Sobic003G123600 Sobic010G234700--Sobic006G190500 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500
Octagon: transcription factors


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