Gene annotation
| Transcriptome id | Sobic.010G105800.1 |
|---|---|
| Synonym | Sb10g009250 |
| Functional annotation | calmodulin-binding heat-shock protein, putative, expressed |
| UniProt | C5Z806 |
| Pfam | PF03893 PF01764 |
| Panther DB | PTHR21493 PTHR21493:SF128 |
| NCBI CDD | KOG2088; Predicted lipase/calmodulin-binding heat-shock protein |
| KEGG Orthology | - |
| Gene Ontology | GO:0016042; lipid catabolic process GO:0006629lipid metabolic process |
Orthologs (automatic annotation)
| TAIR | AT5G37710 : alpha/beta-Hydrolases superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os06g14490.2 : calmodulin-binding heat-shock protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a042734 |
| Brachypodium | PNT76105 |
| Barley | HORVU7Hr1G041570.10 , HORVU7Hr1G041570.11 , HORVU7Hr1G041570.7 , HORVU7Hr1G041570.4 , HORVU7Hr1G041570.3 , HORVU7Hr1G041570.8 , HORVU7Hr1G041570.9 , HORVU7Hr1G041570.6 , HORVU7Hr1G041570.5 , HORVU7Hr1G041570.2 , HORVU7Hr1G041570.1 |
| Wheat | TraesCS7B02G111200 , TraesCS7D02G207300 , TraesCS7A02G204200 , TraesCS7D02G207300 |
| Populus | - |
JBrowse
| Sobic.010G105800 |
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G101500 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endoplasmic oxidoreductin-1 precursor, putative, expressed | K10950: ERO1-like protein alpha |
| 2 | Sobic.001G197400 | actin, putative, expressed | K10355: actin, other eukaryote |
| 3 | Sobic.009G208800 | hydrolase, acting on carbon-nitrogen, putative, expressed | - |
| 4 | Sobic.007G101800 | pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed | - |
| 5 | Sobic.002G248100 | expressed protein | - |
| 6 | Sobic.008G074900 | - | - |
| 7 | Sobic.001G077700 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 8 | Sobic.009G071800 | 6-phosphofructokinase, putative, expressed | K00850: pfkA, 6-phosphofructokinase 1 |
| 9 | Sobic.008G177800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed | K10712: cysteamine dioxygenase |
| 10 | Sobic.010G234600 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed | - |
| 11 | Sobic.010G041700 | B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed | - |
| 12 | Sobic.002G294700 | Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed | - |
| 13 | Sobic.007G188100 | Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed | K13429: chitin elicitor receptor kinase 1 |
| 14 | Sobic.006G161400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein STI, putative, expressed | K09553: stress-induced-phosphoprotein 1 |
| 15 | Sobic.002G374100 | tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed | K13464: jasmonate ZIM domain-containing protein |
| 16 | Sobic.005G010200 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 17 | Sobic.002G353400 | transporter-related, putative, expressed | K15285: solute carrier family 35, member E3 |
| 18 | Sobic.010G228000 | Protein kinase domain containing protein, expressed | - |
| 19 | Sobic.010G220200 | haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed | - |
| 20 | Sobic.010G030900 | glycosyltransferase, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
