Gene annotation
Transcriptome id Sobic.009G071800.1
Synonym PFK3, Sb09g006030
Functional annotation 6-phosphofructokinase, putative, expressed
UniProt C5YUD1
Pfam PF00365
Panther DB PTHR13697 PTHR13697:SF23
NCBI CDD KOG2440; Pyrophosphate-dependent phosphofructo-1-kinase
KEGG Orthology K00850; pfkA, 6-phosphofructokinase 1
Gene Ontology GO:0006096; glycolytic process GO:00038726-phosphofructokinase activity


Orthologs (automatic annotation)
TAIR AT4G26270 : phosphofructokinase 3
RAP-DB (Rice) LOC_Os01g09570.1 : 6-phosphofructokinase, putative, expressed
MaizeGDB (Corn) Zm00025a037532 , Zm00025a035801
Brachypodium KQK07133
Barley HORVU3Hr1G019580.8 , HORVU3Hr1G019580.9 , HORVU3Hr1G019580.2 , HORVU3Hr1G019580.3 , HORVU3Hr1G019580.1 , HORVU3Hr1G019580.6 , HORVU3Hr1G019580.7 , HORVU3Hr1G019580.4 , HORVU3Hr1G019580.5 , HORVU3Hr1G019580.10 , HORVU3Hr1G019580.11 , HORVU3Hr1G019580.12 , HORVU3Hr1G019580.13 , HORVU3Hr1G019580.14 , HORVU3Hr1G019580.15 , HORVU3Hr1G019580.16 , HORVU3Hr1G019580.17
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G077700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
4 Sobic.002G248100 expressed protein -
5 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
6 Sobic.010G076700 expressed protein -
7 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -
8 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
9 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
10 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.010G234700 expressed protein -
13 Sobic.001G489600 expressed protein -
14 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
15 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
16 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.003G150400 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@homeodomain, putative, expressed -
18 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
19 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
20 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -


Gene co-expression network
sample Sobic009G071800 Sobic009G071800 Sobic001G077700 Sobic001G077700 Sobic009G071800--Sobic001G077700 Sobic002G203000 Sobic002G203000 Sobic009G071800--Sobic002G203000 Sobic010G234600 Sobic010G234600 Sobic009G071800--Sobic010G234600 Sobic002G248100 Sobic002G248100 Sobic009G071800--Sobic002G248100 Sobic002G294700 Sobic002G294700 Sobic009G071800--Sobic002G294700 Sobic010G076700 Sobic010G076700 Sobic009G071800--Sobic010G076700 Sobic001G398500 Sobic001G398500 Sobic009G071800--Sobic001G398500 Sobic001G473900 Sobic001G473900 Sobic009G071800--Sobic001G473900 Sobic006G095600 Sobic006G095600 Sobic009G071800--Sobic006G095600 Sobic001G077700--Sobic009G071800 Sobic001G077700--Sobic010G234600 Sobic001G077700--Sobic002G203000 Sobic001G077700--Sobic002G248100 Sobic001G077700--Sobic002G294700 Sobic008G177800 Sobic008G177800 Sobic001G077700--Sobic008G177800 Sobic004G286600 Sobic004G286600 Sobic001G077700--Sobic004G286600 Sobic010G234700 Sobic010G234700 Sobic001G077700--Sobic010G234700 Sobic001G489600 Sobic001G489600 Sobic001G077700--Sobic001G489600 Sobic002G203000--Sobic001G077700 Sobic002G203000--Sobic009G071800 Sobic002G203000--Sobic006G095600 Sobic002G203000--Sobic001G489600 Sobic002G203000--Sobic010G076700 Sobic009G258300 Sobic009G258300 Sobic002G203000--Sobic009G258300 Sobic002G203000--Sobic001G473900 Sobic007G057100 Sobic007G057100 Sobic002G203000--Sobic007G057100 Sobic002G203000--Sobic002G248100 Sobic010G234600--Sobic010G234700 Sobic010G234600--Sobic008G177800 Sobic010G234600--Sobic001G077700 Sobic006G231100 Sobic006G231100 Sobic010G234600--Sobic006G231100 Sobic010G234600--Sobic002G294700 Sobic002G415600 Sobic002G415600 Sobic010G234600--Sobic002G415600 Sobic006G231332 Sobic006G231332 Sobic010G234600--Sobic006G231332 Sobic010G234600--Sobic009G071800 Sobic010G234600--Sobic002G248100 Sobic002G248100--Sobic001G077700 Sobic002G248100--Sobic008G177800 Sobic002G248100--Sobic010G234600 Sobic002G248100--Sobic002G294700 Sobic002G248100--Sobic009G071800 Sobic002G248100--Sobic004G286600 Sobic002G248100--Sobic002G203000 Sobic009G255500 Sobic009G255500 Sobic002G248100--Sobic009G255500 Sobic002G248100--Sobic006G231100 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G374100 Sobic002G374100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic004G036600 Sobic004G036600 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic010G076700--Sobic009G071800 Sobic010G076700--Sobic002G203000 Sobic009G231400 Sobic009G231400 Sobic010G076700--Sobic009G231400 Sobic010G076700--Sobic006G095600 Sobic010G076700--Sobic001G077700 Sobic001G476400 Sobic001G476400 Sobic010G076700--Sobic001G476400 Sobic009G163900 Sobic009G163900 Sobic010G076700--Sobic009G163900 Sobic004G283300 Sobic004G283300 Sobic010G076700--Sobic004G283300 Sobic004G025000 Sobic004G025000 Sobic010G076700--Sobic004G025000 Sobic001G398500--Sobic009G071800 Sobic002G217100 Sobic002G217100 Sobic001G398500--Sobic002G217100 Sobic006G184400 Sobic006G184400 Sobic001G398500--Sobic006G184400 Sobic003G150400 Sobic003G150400 Sobic001G398500--Sobic003G150400 Sobic009G184400 Sobic009G184400 Sobic001G398500--Sobic009G184400 Sobic001G398500--Sobic001G476400 Sobic001G209800 Sobic001G209800 Sobic001G398500--Sobic001G209800 Sobic001G398500--Sobic001G077700 Sobic001G398500--Sobic010G076700 Sobic001G473900--Sobic001G476400 Sobic010G076600 Sobic010G076600 Sobic001G473900--Sobic010G076600 Sobic001G473900--Sobic002G203000 Sobic001G473900--Sobic009G071800 Sobic001G473900--Sobic001G077700 Sobic001G473900--Sobic006G095600 Sobic001G473900--Sobic001G209800 Sobic003G268700 Sobic003G268700 Sobic001G473900--Sobic003G268700 Sobic001G473900--Sobic002G248100 Sobic006G095600--Sobic001G489600 Sobic006G095600--Sobic002G203000 Sobic001G051600 Sobic001G051600 Sobic006G095600--Sobic001G051600 Sobic006G095600--Sobic001G077700 Sobic006G095600--Sobic009G071800 Sobic006G095600--Sobic007G057100 Sobic004G084100 Sobic004G084100 Sobic006G095600--Sobic004G084100 Sobic006G095600--Sobic001G473900 Sobic006G095600--Sobic001G476400
Octagon: transcription factors


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