Gene annotation
Transcriptome id Sobic.008G036000.1
Synonym Sb08g003110, CYP94C1
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5YRR2
Pfam PF00067
Panther DB PTHR24296 PTHR24296:SF38
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G27690 : cytochrome P450, family 94, subfamily C, polypeptide 1
RAP-DB (Rice) LOC_Os11g05380.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a043819 , Zm00025a039594 , Zm00025a029039 , Zm00025a053876 , Zm00025a033483 , Zm00025a053887
Brachypodium KQK05997 , KQJ92259 , KQJ89598 , KQK10668
Barley HORVU2Hr1G117080.4 , HORVU2Hr1G117080.3 , HORVU2Hr1G117080.2 , HORVU2Hr1G117080.1 , HORVU2Hr1G117150.1 , HORVU2Hr1G117150.3 , HORVU2Hr1G117150.2 , HORVU2Hr1G117140.8 , HORVU2Hr1G117140.9 , HORVU2Hr1G117140.6 , HORVU2Hr1G117140.7 , HORVU2Hr1G117140.4 , HORVU2Hr1G117140.5 , HORVU2Hr1G117140.2 , HORVU2Hr1G117140.3 , HORVU2Hr1G117140.1 , HORVU5Hr1G042030.1 , HORVU5Hr1G042030.2 , HORVU1Hr1G073700.1 , HORVU2Hr1G117140.10 , HORVU2Hr1G117140.12 , HORVU3Hr1G084450.1 , HORVU4Hr1G025180.2 , HORVU4Hr1G025180.3 , HORVU4Hr1G025180.1 , HORVU2Hr1G117140.11
Wheat TraesCS2B02G563300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
2 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
4 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
5 Sobic.003G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
6 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
7 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
8 Sobic.004G084100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
10 Sobic.009G071800 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
11 Sobic.006G026700 expressed protein -
12 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
13 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
14 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
16 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.002G135800 chlorophyllase-2, chloroplast precursor, putative, expressed K08099: chlorophyllase
19 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
20 Sobic.001G482700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein


Gene co-expression network
sample Sobic008G036000 Sobic008G036000 Sobic002G197600 Sobic002G197600 Sobic008G036000--Sobic002G197600 Sobic001G209800 Sobic001G209800 Sobic008G036000--Sobic001G209800 Sobic003G268700 Sobic003G268700 Sobic008G036000--Sobic003G268700 Sobic010G076600 Sobic010G076600 Sobic008G036000--Sobic010G076600 Sobic003G158600 Sobic003G158600 Sobic008G036000--Sobic003G158600 Sobic001G462800 Sobic001G462800 Sobic008G036000--Sobic001G462800 Sobic001G077400 Sobic001G077400 Sobic008G036000--Sobic001G077400 Sobic004G084100 Sobic004G084100 Sobic008G036000--Sobic004G084100 Sobic002G036100 Sobic002G036100 Sobic008G036000--Sobic002G036100 Sobic001G081600 Sobic001G081600 Sobic002G197600--Sobic001G081600 Sobic002G217100 Sobic002G217100 Sobic002G197600--Sobic002G217100 Sobic002G197600--Sobic001G462800 Sobic004G281200 Sobic004G281200 Sobic002G197600--Sobic004G281200 Sobic006G210300 Sobic006G210300 Sobic002G197600--Sobic006G210300 Sobic002G367900 Sobic002G367900 Sobic002G197600--Sobic002G367900 Sobic002G197600--Sobic008G036000 Sobic004G244100 Sobic004G244100 Sobic002G197600--Sobic004G244100 Sobic004G176900 Sobic004G176900 Sobic002G197600--Sobic004G176900 Sobic001G209800--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic001G209800--Sobic004G280900 Sobic009G217600 Sobic009G217600 Sobic001G209800--Sobic009G217600 Sobic001G035000 Sobic001G035000 Sobic001G209800--Sobic001G035000 Sobic005G037000 Sobic005G037000 Sobic001G209800--Sobic005G037000 Sobic001G441100 Sobic001G441100 Sobic001G209800--Sobic001G441100 Sobic001G209800--Sobic010G076600 Sobic001G341600 Sobic001G341600 Sobic001G209800--Sobic001G341600 Sobic006G274300 Sobic006G274300 Sobic001G209800--Sobic006G274300 Sobic009G071800 Sobic009G071800 Sobic003G268700--Sobic009G071800 Sobic003G268700--Sobic008G036000 Sobic003G012800 Sobic003G012800 Sobic003G268700--Sobic003G012800 Sobic009G167000 Sobic009G167000 Sobic003G268700--Sobic009G167000 Sobic003G268700--Sobic001G209800 Sobic001G473900 Sobic001G473900 Sobic003G268700--Sobic001G473900 Sobic003G268700--Sobic002G217100 Sobic003G268700--Sobic010G076600 Sobic001G077700 Sobic001G077700 Sobic003G268700--Sobic001G077700 Sobic006G184400 Sobic006G184400 Sobic010G076600--Sobic006G184400 Sobic010G076600--Sobic001G209800 Sobic001G476400 Sobic001G476400 Sobic010G076600--Sobic001G476400 Sobic010G076600--Sobic001G473900 Sobic010G076600--Sobic009G217600 Sobic003G338900 Sobic003G338900 Sobic010G076600--Sobic003G338900 Sobic010G076600--Sobic008G036000 Sobic006G095600 Sobic006G095600 Sobic010G076600--Sobic006G095600 Sobic003G296700 Sobic003G296700 Sobic010G076600--Sobic003G296700 Sobic003G158600--Sobic004G084100 Sobic003G158600--Sobic008G036000 Sobic003G158600--Sobic001G462800 Sobic003G158600--Sobic002G197600 Sobic003G158600--Sobic003G268700 Sobic002G021300 Sobic002G021300 Sobic003G158600--Sobic002G021300 Sobic007G077001 Sobic007G077001 Sobic003G158600--Sobic007G077001 Sobic003G158600--Sobic006G095600 Sobic004G300300 Sobic004G300300 Sobic003G158600--Sobic004G300300 Sobic001G462800--Sobic001G081600 Sobic001G462800--Sobic002G217100 Sobic002G294600 Sobic002G294600 Sobic001G462800--Sobic002G294600 Sobic001G462800--Sobic002G197600 Sobic002G344700 Sobic002G344700 Sobic001G462800--Sobic002G344700 Sobic001G462800--Sobic002G367900 Sobic001G462800--Sobic006G210300 Sobic007G145700 Sobic007G145700 Sobic001G462800--Sobic007G145700 Sobic001G462800--Sobic004G281200 Sobic001G077400--Sobic004G280900 Sobic001G077400--Sobic005G037000 Sobic001G077400--Sobic001G209800 Sobic001G077400--Sobic001G441100 Sobic001G077400--Sobic009G217600 Sobic001G077400--Sobic001G035000 Sobic001G077400--Sobic002G036100 Sobic006G165100 Sobic006G165100 Sobic001G077400--Sobic006G165100 Sobic001G077400--Sobic001G341600 Sobic004G084100--Sobic006G095600 Sobic004G084100--Sobic003G158600 Sobic004G084100--Sobic008G036000 Sobic004G084100--Sobic007G077001 Sobic001G489600 Sobic001G489600 Sobic004G084100--Sobic001G489600 Sobic002G203000 Sobic002G203000 Sobic004G084100--Sobic002G203000 Sobic004G084100--Sobic001G077700 Sobic004G084100--Sobic009G071800 Sobic004G084100--Sobic010G076600 Sobic002G036100--Sobic001G077400 Sobic002G036100--Sobic004G280900 Sobic001G538866 Sobic001G538866 Sobic002G036100--Sobic001G538866 Sobic002G036100--Sobic006G165100 Sobic002G140300 Sobic002G140300 Sobic002G036100--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic001G040200 Sobic001G040200 Sobic002G036100--Sobic001G040200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.