Gene annotation
Transcriptome id Sobic.002G217100.1
Synonym Sb02g025910
Functional annotation tyrosine protein kinase domain containing protein, putative, expressed
UniProt C5XDR2
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF57
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G05940 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g27010.1 : tyrosine protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a017867 , Zm00025a049633 , Zm00025a052320 , Zm00025a011296 , Zm00025a029688 , Zm00025a012726 , Zm00025a030297 , Zm00025a047168 , Zm00025a002598 , Zm00025a025630 , Zm00025a040184 , Zm00025a005747 , Zm00025a042449 , Zm00025a048740 , Zm00025a000914 , Zm00025a025430 , Zm00025a044003 , Zm00025a053364 , Zm00025a030142 , Zm00025a002811
Brachypodium KQK19638 , KQK19114 , KQK21579 , KQJ90421 , KQJ98552 , KQK01632 , PNT72055 , KQK19122 , KQK19123 , KQK05701 , KQK01265 , KQK23815 , KQJ91661 , PNT69406 , KQJ88913
Barley HORVU1Hr1G083220.10 , HORVU1Hr1G083220.11 , HORVU1Hr1G083220.12 , HORVU3Hr1G051830.7 , HORVU3Hr1G051830.4 , HORVU3Hr1G051830.2 , HORVU3Hr1G051830.3 , HORVU3Hr1G051830.1 , HORVU1Hr1G004690.7 , HORVU1Hr1G004690.4 , HORVU1Hr1G004690.3 , HORVU1Hr1G004690.1 , HORVU5Hr1G061850.9 , HORVU5Hr1G061850.8 , HORVU5Hr1G061850.1 , HORVU5Hr1G061850.3 , HORVU5Hr1G061850.2 , HORVU5Hr1G061850.5 , HORVU5Hr1G061850.4 , HORVU5Hr1G061850.7 , HORVU5Hr1G061850.6 , HORVU1Hr1G004690.10 , HORVU1Hr1G004690.11 , HORVU4Hr1G066310.2 , HORVU4Hr1G066310.8 , HORVU1Hr1G004590.8 , HORVU4Hr1G066310.10 , HORVU1Hr1G083220.3 , HORVU1Hr1G083220.6 , HORVU1Hr1G083220.4 , HORVU1Hr1G083220.9 , HORVU7Hr1G108150.1 , HORVU7Hr1G108150.2 , HORVU7Hr1G108150.3 , HORVU7Hr1G108150.4 , HORVU7Hr1G108150.5 , HORVU7Hr1G108150.6 , HORVU7Hr1G108150.7 , HORVU4Hr1G066310.9 , HORVU1Hr1G004590.9 , HORVU1Hr1G004590.1 , HORVU1Hr1G004590.3 , HORVU1Hr1G004590.2 , HORVU1Hr1G004590.5 , HORVU1Hr1G004590.4 , HORVU1Hr1G004590.7 , HORVU1Hr1G004590.6 , HORVU1Hr1G004590.10 , HORVU4Hr1G000590.4 , HORVU4Hr1G000590.5 , HORVU4Hr1G000590.6 , HORVU4Hr1G000590.1 , HORVU4Hr1G000590.2 , HORVU4Hr1G000590.3 , HORVU4Hr1G082100.1 , HORVU4Hr1G082100.2 , HORVU4Hr1G082100.5 , HORVU4Hr1G082100.4 , HORVU1Hr1G019770.5 , HORVU1Hr1G019770.4 , HORVU1Hr1G019770.3 , HORVU1Hr1G019770.2 , HORVU1Hr1G019770.1 , HORVU3Hr1G064110.9 , HORVU3Hr1G064110.8 , HORVU3Hr1G064110.5 , HORVU3Hr1G064110.7 , HORVU3Hr1G064110.6 , HORVU3Hr1G064110.1 , HORVU3Hr1G064110.3 , HORVU3Hr1G064110.2 , HORVU5Hr1G061760.3 , HORVU5Hr1G061760.2 , HORVU5Hr1G061760.1 , HORVU5Hr1G061760.6 , HORVU5Hr1G061760.5 , HORVU5Hr1G061760.4 , HORVU5Hr1G061820.2 , HORVU5Hr1G061820.3 , HORVU5Hr1G061820.4 , HORVU5Hr1G061820.5 , HORVU5Hr1G061820.6 , HORVU5Hr1G061820.7 , HORVU5Hr1G061820.8 , HORVU5Hr1G061820.9 , HORVU7Hr1G034290.3 , HORVU7Hr1G034290.2 , HORVU7Hr1G034290.7 , HORVU7Hr1G034290.6 , HORVU7Hr1G034290.5 , HORVU7Hr1G034290.4 , HORVU7Hr1G034290.9 , HORVU7Hr1G034290.8 , HORVU3Hr1G051820.5 , HORVU3Hr1G051820.4 , HORVU3Hr1G051820.6 , HORVU3Hr1G051820.1 , HORVU3Hr1G051820.3 , HORVU3Hr1G051820.2 , HORVU5Hr1G061810.1 , HORVU4Hr1G025070.2 , HORVU4Hr1G025070.3 , HORVU4Hr1G025070.1 , HORVU3Hr1G064110.11 , HORVU3Hr1G064110.10 , HORVU3Hr1G064110.12 , HORVU3Hr1G064110.15 , HORVU3Hr1G064110.14 , HORVU4Hr1G066310.11 , HORVU5Hr1G107330.2 , HORVU5Hr1G107330.1 , HORVU3Hr1G051830.6 , HORVU3Hr1G051830.5 , HORVU3Hr1G051830.8 , HORVU7Hr1G088710.3 , HORVU7Hr1G088710.2 , HORVU4Hr1G016080.1 , HORVU6Hr1G081330.3 , HORVU6Hr1G081330.2 , HORVU2Hr1G020420.4 , HORVU5Hr1G061850.15 , HORVU5Hr1G061850.14 , HORVU5Hr1G061850.11 , HORVU5Hr1G061850.10 , HORVU5Hr1G061850.13 , HORVU5Hr1G061850.12 , HORVU5Hr1G061810.2
Wheat TraesCS6A02G336600 , TraesCS1D02G091600 , TraesCS4D02G000300 , TraesCS1A02G031200 , TraesCS1D02G032600 , TraesCS5D02G216400 , TraesCS6D02G316600 , TraesCS2A02G508700 , TraesCS5D02G216800 , TraesCS5D02G216500 , TraesCS3D02G048000 , TraesCS4A02G000300 , TraesCS1B02G038800 , TraesCS4D02G238900 , TraesCS7D02G318600 , TraesCS7D02G318600 , TraesCS4B02G238700 , TraesCS4D02G322300 , TraesCS4D02G322300 , TraesCS5B02G208400 , TraesCS5A02G210300 , TraesCS1A02G110000 , TraesCS5B02G208500 , TraesCS6B02G367100 , TraesCS5B02G208200 , TraesCSU02G047400 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS3A02G262100 , TraesCS7D02G165300 , TraesCS6D02G027700 , TraesCS5A02G210200 , TraesCS4B02G294300 , TraesCS3B02G295400 , TraesCS4B02G000300 , TraesCS7B02G448200 , TraesCS4D02G293200 , TraesCS4A02G062000 , TraesCS7A02G163300 , TraesCS5A02G084200 , TraesCS5D02G216600 , TraesCS5B02G069900 , TraesCS5A02G215200 , TraesCS5B02G208300 , TraesCS5B02G208600 , TraesCS5B02G089800 , TraesCS4B02G325400 , TraesCS1B02G109400 , TraesCS5A02G215400 , TraesCSU02G047400 , TraesCS3B02G295400 , TraesCS3B02G295400 , TraesCS3B02G295400 , TraesCS3D02G262200 , TraesCS3D02G262200 , TraesCS5D02G096200 , TraesCS6B02G033300
Populus -


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cDNA sequences
Sobic.002G217100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
3 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
4 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
5 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
7 Sobic.004G244300 formin-like protein 3 precursor, putative, expressed -
8 Sobic.009G167000 expressed protein -
9 Sobic.004G244100 glycosyl transferase 8 domain containing protein, putative, expressed -
10 Sobic.006G184400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
11 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -
12 Sobic.003G268900 STE_MEKK_ste11_MAP3K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
14 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
15 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
17 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
18 Sobic.007G145700 expressed protein -
19 Sobic.004G283300 AP2 domain containing protein, expressed -
20 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G217100 Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic002G217100--Sobic006G210300 Sobic001G081600 Sobic001G081600 Sobic002G217100--Sobic001G081600 Sobic001G462800 Sobic001G462800 Sobic002G217100--Sobic001G462800 Sobic004G281200 Sobic004G281200 Sobic002G217100--Sobic004G281200 Sobic002G197600 Sobic002G197600 Sobic002G217100--Sobic002G197600 Sobic010G016500 Sobic010G016500 Sobic002G217100--Sobic010G016500 Sobic004G244300 Sobic004G244300 Sobic002G217100--Sobic004G244300 Sobic009G167000 Sobic009G167000 Sobic002G217100--Sobic009G167000 Sobic004G244100 Sobic004G244100 Sobic002G217100--Sobic004G244100 Sobic006G210300--Sobic002G217100 Sobic006G210300--Sobic004G281200 Sobic006G210300--Sobic001G081600 Sobic006G210300--Sobic002G197600 Sobic006G210300--Sobic001G462800 Sobic002G367900 Sobic002G367900 Sobic006G210300--Sobic002G367900 Sobic006G210300--Sobic010G016500 Sobic006G210300--Sobic004G244100 Sobic006G184400 Sobic006G184400 Sobic006G210300--Sobic006G184400 Sobic001G081600--Sobic001G462800 Sobic001G081600--Sobic002G217100 Sobic001G081600--Sobic006G210300 Sobic004G283300 Sobic004G283300 Sobic001G081600--Sobic004G283300 Sobic001G081600--Sobic002G197600 Sobic001G081600--Sobic004G281200 Sobic002G344700 Sobic002G344700 Sobic001G081600--Sobic002G344700 Sobic004G025000 Sobic004G025000 Sobic001G081600--Sobic004G025000 Sobic001G476400 Sobic001G476400 Sobic001G081600--Sobic001G476400 Sobic001G462800--Sobic001G081600 Sobic001G462800--Sobic002G217100 Sobic002G294600 Sobic002G294600 Sobic001G462800--Sobic002G294600 Sobic001G462800--Sobic002G197600 Sobic001G462800--Sobic002G344700 Sobic001G462800--Sobic002G367900 Sobic001G462800--Sobic006G210300 Sobic007G145700 Sobic007G145700 Sobic001G462800--Sobic007G145700 Sobic001G462800--Sobic004G281200 Sobic004G281200--Sobic010G016500 Sobic004G281200--Sobic004G244300 Sobic008G059000 Sobic008G059000 Sobic004G281200--Sobic008G059000 Sobic006G194600 Sobic006G194600 Sobic004G281200--Sobic006G194600 Sobic006G203000 Sobic006G203000 Sobic004G281200--Sobic006G203000 Sobic004G281200--Sobic002G217100 Sobic004G281200--Sobic006G210300 Sobic004G281200--Sobic001G081600 Sobic004G281200--Sobic004G244100 Sobic002G197600--Sobic001G081600 Sobic002G197600--Sobic002G217100 Sobic002G197600--Sobic001G462800 Sobic002G197600--Sobic004G281200 Sobic002G197600--Sobic006G210300 Sobic002G197600--Sobic002G367900 Sobic008G036000 Sobic008G036000 Sobic002G197600--Sobic008G036000 Sobic002G197600--Sobic004G244100 Sobic004G176900 Sobic004G176900 Sobic002G197600--Sobic004G176900 Sobic010G016500--Sobic004G281200 Sobic010G016500--Sobic004G244300 Sobic010G016500--Sobic006G194600 Sobic010G016500--Sobic006G203000 Sobic010G016500--Sobic004G283300 Sobic010G016500--Sobic002G217100 Sobic010G016500--Sobic004G244100 Sobic010G016500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic010G016500--Sobic002G182800 Sobic004G244300--Sobic004G281200 Sobic004G244300--Sobic006G194600 Sobic004G244300--Sobic010G016500 Sobic004G244300--Sobic006G203000 Sobic004G244300--Sobic004G244100 Sobic004G244300--Sobic009G167000 Sobic004G244300--Sobic002G217100 Sobic002G037400 Sobic002G037400 Sobic004G244300--Sobic002G037400 Sobic001G075101 Sobic001G075101 Sobic004G244300--Sobic001G075101 Sobic002G021300 Sobic002G021300 Sobic009G167000--Sobic002G021300 Sobic009G167000--Sobic004G244300 Sobic009G167000--Sobic006G194600 Sobic009G167000--Sobic004G244100 Sobic009G167000--Sobic004G281200 Sobic009G167000--Sobic002G217100 Sobic009G076500 Sobic009G076500 Sobic009G167000--Sobic009G076500 Sobic008G058900 Sobic008G058900 Sobic009G167000--Sobic008G058900 Sobic009G167000--Sobic008G059000 Sobic003G268900 Sobic003G268900 Sobic004G244100--Sobic003G268900 Sobic004G244100--Sobic006G194600 Sobic004G244100--Sobic004G244300 Sobic004G244100--Sobic004G281200 Sobic004G244100--Sobic009G167000 Sobic004G244100--Sobic010G016500 Sobic004G244100--Sobic002G217100 Sobic004G244100--Sobic006G203000 Sobic006G026400 Sobic006G026400 Sobic004G244100--Sobic006G026400
Octagon: transcription factors


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